RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 OSCARQ8IYS5 282 aa15.81■□□□□ 0.12
SMC4-214ENST00000472991 EHMT2Q96KQ7 1210 aa15.8■□□□□ 0.12
SMC4-214ENST00000472991 BIVM-ERCC5R4GMW8 1640 aa15.79■□□□□ 0.12
SMC4-214ENST00000472991 SYNJ1O43426 1573 aa15.77■□□□□ 0.11
SMC4-214ENST00000472991 TOP2BQ02880 1626 aa15.75■□□□□ 0.11
SMC4-214ENST00000472991 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
SMC4-214ENST00000472991 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
SMC4-214ENST00000472991 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
SMC4-214ENST00000472991 AKT1S1Q96B36 256 aa15.72■□□□□ 0.11
SMC4-214ENST00000472991 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
SMC4-214ENST00000472991 IFT140Q96RY7 1462 aa15.7■□□□□ 0.1
SMC4-214ENST00000472991 WDR97A6NE52 1622 aa15.69■□□□□ 0.1
SMC4-214ENST00000472991 FBLN2P98095 1184 aa15.69■□□□□ 0.1
SMC4-214ENST00000472991 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
SMC4-214ENST00000472991 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
SMC4-214ENST00000472991 EIF4G3O43432 1585 aaKnown RBP15.65■□□□□ 0.1
SMC4-214ENST00000472991 SOGA1O94964 1423 aa15.63■□□□□ 0.09
SMC4-214ENST00000472991 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
SMC4-214ENST00000472991 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
SMC4-214ENST00000472991 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
SMC4-214ENST00000472991 PBRM1Q86U86 1689 aa15.57■□□□□ 0.08
SMC4-214ENST00000472991 ABCA10Q8WWZ4 1543 aa15.57■□□□□ 0.08
SMC4-214ENST00000472991 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
SMC4-214ENST00000472991 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
SMC4-214ENST00000472991 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
SMC4-214ENST00000472991 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
SMC4-214ENST00000472991 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.082e-8■■■■■ 155.3
SMC4-214ENST00000472991 TDRD9Q8NDG6 1382 aaKnown RBP15.51■□□□□ 0.07
SMC4-214ENST00000472991 GAPVD1Q14C86 1478 aa15.48■□□□□ 0.07
SMC4-214ENST00000472991 CHD1O14646 1710 aa15.48■□□□□ 0.07
SMC4-214ENST00000472991 GRIN2BQ13224 1484 aa15.45■□□□□ 0.06
SMC4-214ENST00000472991 SNAPC4Q5SXM2 1469 aa15.44■□□□□ 0.06
SMC4-214ENST00000472991 TRIM41Q8WV44 630 aa15.43■□□□□ 0.06
SMC4-214ENST00000472991 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
SMC4-214ENST00000472991 MAGI1Q96QZ7 1491 aaPredicted RBP15.4■□□□□ 0.06
SMC4-214ENST00000472991 ERICH3Q5RHP9 1530 aa15.4■□□□□ 0.06
SMC4-214ENST00000472991 ADAMTS12P58397 1594 aa15.4■□□□□ 0.06
SMC4-214ENST00000472991 KIF27Q86VH2 1401 aa15.38■□□□□ 0.05
SMC4-214ENST00000472991 SSUH2Q9Y2M2 353 aa15.38■□□□□ 0.05
SMC4-214ENST00000472991 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
SMC4-214ENST00000472991 CUL7Q14999 1698 aa15.35■□□□□ 0.05
SMC4-214ENST00000472991 SYNJ2O15056 1496 aa15.33■□□□□ 0.05
SMC4-214ENST00000472991 RUSC2Q8N2Y8 1516 aa15.33■□□□□ 0.05
SMC4-214ENST00000472991 PIP4P2Q8N4L2 257 aa15.3■□□□□ 0.04
SMC4-214ENST00000472991 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
SMC4-214ENST00000472991 GRIN2AQ12879 1464 aa15.27■□□□□ 0.04
SMC4-214ENST00000472991 IGF1RP08069 1367 aa15.26■□□□□ 0.03
SMC4-214ENST00000472991 FXR2P51116 673 aaKnown RBP eCLIP15.26■□□□□ 0.032e-10■■■■■ 37.2
SMC4-214ENST00000472991 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
SMC4-214ENST00000472991 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
SMC4-214ENST00000472991 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
SMC4-214ENST00000472991 CLASP1Q7Z460 1538 aa15.22■□□□□ 0.03
SMC4-214ENST00000472991 EEA1Q15075 1411 aa15.2■□□□□ 0.02
SMC4-214ENST00000472991 CARMIL1Q5VZK9 1371 aa15.2■□□□□ 0.02
SMC4-214ENST00000472991 NUP160Q12769 1436 aa15.17■□□□□ 0.02
SMC4-214ENST00000472991 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
SMC4-214ENST00000472991 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
SMC4-214ENST00000472991 RAPGEF2Q9Y4G8 1499 aa15.15■□□□□ 0.02
SMC4-214ENST00000472991 CLEC11AQ9Y240 323 aa15.15■□□□□ 0.02
SMC4-214ENST00000472991 FAM9AQ8IZU1 332 aaPredicted RBP15.14■□□□□ 0.01
SMC4-214ENST00000472991 PRXQ9BXM0 1461 aa15.14■□□□□ 0.01
SMC4-214ENST00000472991 RIMBP3CA6NJZ7 1639 aa15.12■□□□□ 0.01
SMC4-214ENST00000472991 RIMBP3BA6NNM3 1639 aa15.12■□□□□ 0.01
SMC4-214ENST00000472991 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
SMC4-214ENST00000472991 RIMBP3Q9UFD9 1639 aa15.12■□□□□ 0.01
SMC4-214ENST00000472991 KIF21BO75037 1637 aa15.11■□□□□ 0.01
SMC4-214ENST00000472991 ARHGEF11O15085 1522 aa15.08■□□□□ 0.01
SMC4-214ENST00000472991 IQGAP2Q13576 1575 aa15.07■□□□□ 0
SMC4-214ENST00000472991 KIAA0586Q9BVV6 1533 aa15.06■□□□□ 0
SMC4-214ENST00000472991 ERCC6L2Q5T890 1561 aa15.03■□□□□ -0
SMC4-214ENST00000472991 PRKAR2AP13861 404 aaKnown RBP15□□□□□ -0.01
SMC4-214ENST00000472991 GOLGA3Q08378 1498 aa14.99□□□□□ -0.01
SMC4-214ENST00000472991 ARAP1Q96P48 1450 aa14.97□□□□□ -0.01
SMC4-214ENST00000472991 SPDYE4A6NLX3 237 aa14.97□□□□□ -0.01
SMC4-214ENST00000472991 PRG4Q92954 1404 aaPredicted RBP14.97□□□□□ -0.01
SMC4-214ENST00000472991 JPH4Q96JJ6 628 aa14.96□□□□□ -0.01
SMC4-214ENST00000472991 UGGT2Q9NYU1 1516 aa14.96□□□□□ -0.02
SMC4-214ENST00000472991 HAX1O00165 279 aa14.94□□□□□ -0.02
SMC4-214ENST00000472991 PRR29P0C7W0 189 aa14.94□□□□□ -0.02
SMC4-214ENST00000472991 KIAA0556O60303 1618 aa14.94□□□□□ -0.02
SMC4-214ENST00000472991 SP7Q8TDD2 431 aaPredicted RBP14.92□□□□□ -0.02
SMC4-214ENST00000472991 DISP1Q96F81 1524 aa14.91□□□□□ -0.02
SMC4-214ENST00000472991 SAMD9Q5K651 1589 aa14.9□□□□□ -0.02
SMC4-214ENST00000472991 CARMIL2Q6F5E8 1435 aa14.89□□□□□ -0.03
SMC4-214ENST00000472991 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
SMC4-214ENST00000472991 CHADLQ6NUI6 762 aa14.87□□□□□ -0.03
SMC4-214ENST00000472991 CYB5RLQ6IPT4 315 aa14.85□□□□□ -0.03
SMC4-214ENST00000472991 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
SMC4-214ENST00000472991 EVX2Q03828 476 aa14.82□□□□□ -0.04
SMC4-214ENST00000472991 TNIKQ9UKE5 1360 aa14.82□□□□□ -0.04
SMC4-214ENST00000472991 RANGAP1P46060 587 aaPredicted RBP14.81□□□□□ -0.04
SMC4-214ENST00000472991 ADCY10Q96PN6 1610 aa14.81□□□□□ -0.04
SMC4-214ENST00000472991 PTPRGP23470 1445 aa14.79□□□□□ -0.04
SMC4-214ENST00000472991 TTBK1Q5TCY1 1321 aaPredicted RBP14.79□□□□□ -0.04
SMC4-214ENST00000472991 STAG3Q9UJ98 1225 aa14.78□□□□□ -0.04
SMC4-214ENST00000472991 FHOD3Q2V2M9 1422 aa14.76□□□□□ -0.05
SMC4-214ENST00000472991 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
SMC4-214ENST00000472991 P3H3Q8IVL6 736 aa14.76□□□□□ -0.05
SMC4-214ENST00000472991 ARHGAP35Q9NRY4 1499 aa14.76□□□□□ -0.05
SMC4-214ENST00000472991 ABCA8O94911 1581 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms