RNA–Protein interactions for RNA: ENST00000472339.5

FXR1-209, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 5

Gene FXR1, Length 2,130 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-209ENST00000472339 TIMELESSQ9UNS1 1208 aa21.17■□□□□ 0.98
FXR1-209ENST00000472339 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
FXR1-209ENST00000472339 IGF1RP08069 1367 aa21.15■□□□□ 0.98
FXR1-209ENST00000472339 CFAP43Q8NDM7 1665 aa21.13■□□□□ 0.97
FXR1-209ENST00000472339 DDX10Q13206 875 aaKnown RBP21.11■□□□□ 0.97
FXR1-209ENST00000472339 PHLDB1Q86UU1 1377 aa21.11■□□□□ 0.97
FXR1-209ENST00000472339 PPP1R15AO75807 674 aaPredicted RBP21.11■□□□□ 0.97
FXR1-209ENST00000472339 FHAD1B1AJZ9 1412 aa21.1■□□□□ 0.97
FXR1-209ENST00000472339 FKBP8Q14318 412 aa21.08■□□□□ 0.97
FXR1-209ENST00000472339 CCER2I3L3R5 266 aa21.07■□□□□ 0.96
FXR1-209ENST00000472339 CARMIL1Q5VZK9 1371 aa21.07■□□□□ 0.96
FXR1-209ENST00000472339 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
FXR1-209ENST00000472339 BCANQ96GW7 911 aa21.04■□□□□ 0.96
FXR1-209ENST00000472339 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
FXR1-209ENST00000472339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.961e-6■□□□□ 8.8
FXR1-209ENST00000472339 NEFLP07196 543 aa21.02■□□□□ 0.96
FXR1-209ENST00000472339 PCF11O94913 1555 aaKnown RBP21.02■□□□□ 0.96
FXR1-209ENST00000472339 ANP32CO43423 234 aa20.98■□□□□ 0.95
FXR1-209ENST00000472339 FGD5Q6ZNL6 1462 aa20.96■□□□□ 0.95
FXR1-209ENST00000472339 FYCO1Q9BQS8 1478 aa20.95■□□□□ 0.94
FXR1-209ENST00000472339 AQRO60306 1485 aaKnown RBP eCLIP20.92■□□□□ 0.942e-8■■■■□ 23.5
FXR1-209ENST00000472339 EFCAB5A4FU69 1503 aa20.91■□□□□ 0.94
FXR1-209ENST00000472339 RBM19Q9Y4C8 960 aaKnown RBP20.9■□□□□ 0.94
FXR1-209ENST00000472339 CASKIN1Q8WXD9 1431 aa20.89■□□□□ 0.94
FXR1-209ENST00000472339 CADPSQ9ULU8 1353 aa20.89■□□□□ 0.93
FXR1-209ENST00000472339 TRIM52Q96A61 297 aa20.87■□□□□ 0.93
FXR1-209ENST00000472339 TONSLQ96HA7 1378 aa20.86■□□□□ 0.93
FXR1-209ENST00000472339 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
FXR1-209ENST00000472339 FHOD3Q2V2M9 1422 aa20.85■□□□□ 0.93
FXR1-209ENST00000472339 FGD6Q6ZV73 1430 aa20.83■□□□□ 0.93
FXR1-209ENST00000472339 P3H3Q8IVL6 736 aa20.83■□□□□ 0.93
FXR1-209ENST00000472339 CCDC18Q5T9S5 1454 aa20.83■□□□□ 0.92
FXR1-209ENST00000472339 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.92
FXR1-209ENST00000472339 UACAQ9BZF9 1416 aa20.82■□□□□ 0.92
FXR1-209ENST00000472339 HFM1A2PYH4 1435 aa20.8■□□□□ 0.92
FXR1-209ENST00000472339 CTTNBP2Q8WZ74 1663 aa20.79■□□□□ 0.92
FXR1-209ENST00000472339 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
FXR1-209ENST00000472339 PTPN23Q9H3S7 1636 aa20.78■□□□□ 0.92
FXR1-209ENST00000472339 FMN1Q68DA7 1419 aa20.77■□□□□ 0.92
FXR1-209ENST00000472339 CUL7Q14999 1698 aa20.77■□□□□ 0.91
FXR1-209ENST00000472339 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
FXR1-209ENST00000472339 SNAPC4Q5SXM2 1469 aa20.73■□□□□ 0.91
FXR1-209ENST00000472339 DNMBPQ6XZF7 1577 aa20.72■□□□□ 0.91
FXR1-209ENST00000472339 PTPRKQ15262 1439 aa20.72■□□□□ 0.91
FXR1-209ENST00000472339 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
FXR1-209ENST00000472339 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
FXR1-209ENST00000472339 MTUS2Q5JR59 1369 aa20.7■□□□□ 0.9
FXR1-209ENST00000472339 NAIPQ13075 1403 aa20.7■□□□□ 0.9
FXR1-209ENST00000472339 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
FXR1-209ENST00000472339 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
FXR1-209ENST00000472339 HNRNPUQ00839 825 aaKnown RBP eCLIP20.66■□□□□ 0.9
FXR1-209ENST00000472339 FANCIQ9NVI1 1328 aa20.66■□□□□ 0.9
FXR1-209ENST00000472339 MYOM3Q5VTT5 1437 aa20.66■□□□□ 0.9
FXR1-209ENST00000472339 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
FXR1-209ENST00000472339 ERICH6BQ5W0A0 696 aa20.65■□□□□ 0.9
FXR1-209ENST00000472339 THOC2Q8NI27 1593 aaKnown RBP20.64■□□□□ 0.9
FXR1-209ENST00000472339 NCOA2Q15596 1464 aa20.64■□□□□ 0.89
FXR1-209ENST00000472339 SUPT6HQ7KZ85 1726 aaKnown RBP20.64■□□□□ 0.89
FXR1-209ENST00000472339 LRRIQ1Q96JM4 1722 aa20.63■□□□□ 0.89
FXR1-209ENST00000472339 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
FXR1-209ENST00000472339 CDK11AQ9UQ88 783 aaPredicted RBP20.63■□□□□ 0.89
FXR1-209ENST00000472339 TOPBP1Q92547 1522 aa20.62■□□□□ 0.89
FXR1-209ENST00000472339 MSH5O43196 834 aa20.62■□□□□ 0.89
FXR1-209ENST00000472339 EHBP1L1Q8N3D4 1523 aa20.6■□□□□ 0.89
FXR1-209ENST00000472339 GRIN2BQ13224 1484 aa20.6■□□□□ 0.89
FXR1-209ENST00000472339 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.89
FXR1-209ENST00000472339 HECW1Q76N89 1606 aa20.58■□□□□ 0.88
FXR1-209ENST00000472339 GCC2Q8IWJ2 1684 aa20.57■□□□□ 0.88
FXR1-209ENST00000472339 HSPA5P11021 654 aaKnown RBP20.56■□□□□ 0.88
FXR1-209ENST00000472339 UGGT2Q9NYU1 1516 aa20.55■□□□□ 0.88
FXR1-209ENST00000472339 ARHGEF11O15085 1522 aa20.55■□□□□ 0.88
FXR1-209ENST00000472339 CNTLNQ9NXG0 1405 aa20.54■□□□□ 0.88
FXR1-209ENST00000472339 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
FXR1-209ENST00000472339 AKNAQ7Z591 1439 aa20.52■□□□□ 0.88
FXR1-209ENST00000472339 TCOF1Q13428 1488 aaKnown RBP20.52■□□□□ 0.88
FXR1-209ENST00000472339 EIF4G2P78344 907 aaKnown RBP eCLIP20.52■□□□□ 0.88
FXR1-209ENST00000472339 PPP4R2Q9NY27 417 aa20.52■□□□□ 0.88
FXR1-209ENST00000472339 IRX6P78412 446 aaPredicted RBP20.51■□□□□ 0.87
FXR1-209ENST00000472339 DENND4BO75064 1496 aaPredicted RBP20.5■□□□□ 0.87
FXR1-209ENST00000472339 ERICH6Q7L0X2 663 aa20.47■□□□□ 0.87
FXR1-209ENST00000472339 ABCA5Q8WWZ7 1642 aa20.47■□□□□ 0.87
FXR1-209ENST00000472339 NCOA1Q15788 1441 aa20.45■□□□□ 0.86
FXR1-209ENST00000472339 MAGI3Q5TCQ9 1506 aa20.44■□□□□ 0.86
FXR1-209ENST00000472339 RRP7BPQ9NSQ0 103 aa20.44■□□□□ 0.86
FXR1-209ENST00000472339 CCDC7Q96M83 1385 aa20.43■□□□□ 0.86
FXR1-209ENST00000472339 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
FXR1-209ENST00000472339 ZBED9Q6R2W3 1325 aa20.42■□□□□ 0.86
FXR1-209ENST00000472339 KDM6BO15054 1643 aa20.41■□□□□ 0.86
FXR1-209ENST00000472339 CCDC184Q52MB2 194 aa20.41■□□□□ 0.86
FXR1-209ENST00000472339 MPHOSPH9Q99550 1183 aa20.39■□□□□ 0.86
FXR1-209ENST00000472339 MYT1LQ9UL68 1186 aa20.39■□□□□ 0.86
FXR1-209ENST00000472339 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
FXR1-209ENST00000472339 MIA2Q96PC5 1412 aa20.38■□□□□ 0.85
FXR1-209ENST00000472339 L3MBTL2Q969R5 705 aa20.38■□□□□ 0.85
FXR1-209ENST00000472339 CHIC2Q9UKJ5 165 aa20.38■□□□□ 0.85
FXR1-209ENST00000472339 POLR1AO95602 1720 aaPredicted RBP20.38■□□□□ 0.85
FXR1-209ENST00000472339 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
FXR1-209ENST00000472339 NESP48681 1621 aa20.37■□□□□ 0.85
FXR1-209ENST00000472339 MRS2Q9HD23 443 aa20.36■□□□□ 0.85
FXR1-209ENST00000472339 C11orf95C9JLR9 678 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms