RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 LRRC9Q6ZRR7 1453 aa18.84■□□□□ 0.61
SFXN3-205ENST00000470252 WDR97A6NE52 1622 aa18.83■□□□□ 0.6
SFXN3-205ENST00000470252 TSHZ2Q9NRE2 1034 aa18.82■□□□□ 0.6
SFXN3-205ENST00000470252 NESP48681 1621 aa18.82■□□□□ 0.6
SFXN3-205ENST00000470252 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
SFXN3-205ENST00000470252 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
SFXN3-205ENST00000470252 FAM50AQ14320 339 aaKnown RBP18.79■□□□□ 0.6
SFXN3-205ENST00000470252 SIN3AQ96ST3 1273 aa18.79■□□□□ 0.6
SFXN3-205ENST00000470252 CFAP43Q8NDM7 1665 aa18.79■□□□□ 0.6
SFXN3-205ENST00000470252 DDX10Q13206 875 aaKnown RBP18.78■□□□□ 0.6
SFXN3-205ENST00000470252 PCF11O94913 1555 aaKnown RBP18.75■□□□□ 0.59
SFXN3-205ENST00000470252 FHAD1B1AJZ9 1412 aa18.75■□□□□ 0.59
SFXN3-205ENST00000470252 FGD5Q6ZNL6 1462 aa18.75■□□□□ 0.59
SFXN3-205ENST00000470252 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
SFXN3-205ENST00000470252 BCANQ96GW7 911 aa18.72■□□□□ 0.59
SFXN3-205ENST00000470252 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
SFXN3-205ENST00000470252 P3H3Q8IVL6 736 aa18.71■□□□□ 0.59
SFXN3-205ENST00000470252 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
SFXN3-205ENST00000470252 PPP1R15AO75807 674 aaPredicted RBP18.69■□□□□ 0.58
SFXN3-205ENST00000470252 FKBP8Q14318 412 aa18.68■□□□□ 0.58
SFXN3-205ENST00000470252 ERCC6Q03468 1493 aa18.68■□□□□ 0.58
SFXN3-205ENST00000470252 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
SFXN3-205ENST00000470252 HIRIP3Q9BW71 556 aaPredicted RBP18.66■□□□□ 0.58
SFXN3-205ENST00000470252 FHOD3Q2V2M9 1422 aa18.64■□□□□ 0.57
SFXN3-205ENST00000470252 FYCO1Q9BQS8 1478 aa18.62■□□□□ 0.57
SFXN3-205ENST00000470252 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
SFXN3-205ENST00000470252 PDS5BQ9NTI5 1447 aa18.61■□□□□ 0.57
SFXN3-205ENST00000470252 ANP32CO43423 234 aa18.6■□□□□ 0.57
SFXN3-205ENST00000470252 CCER2I3L3R5 266 aa18.6■□□□□ 0.57
SFXN3-205ENST00000470252 NEFLP07196 543 aa18.59■□□□□ 0.57
SFXN3-205ENST00000470252 KIF21AQ7Z4S6 1674 aa18.58■□□□□ 0.56
SFXN3-205ENST00000470252 EFCAB5A4FU69 1503 aa18.58■□□□□ 0.56
SFXN3-205ENST00000470252 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.56
SFXN3-205ENST00000470252 CASKIN1Q8WXD9 1431 aa18.57■□□□□ 0.56
SFXN3-205ENST00000470252 TRIM52Q96A61 297 aa18.57■□□□□ 0.56
SFXN3-205ENST00000470252 CTTNBP2Q8WZ74 1663 aa18.56■□□□□ 0.56
SFXN3-205ENST00000470252 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
SFXN3-205ENST00000470252 AQRO60306 1485 aaKnown RBP eCLIP18.55■□□□□ 0.56
SFXN3-205ENST00000470252 FANCD2Q9BXW9 1451 aa18.53■□□□□ 0.56
SFXN3-205ENST00000470252 FGD6Q6ZV73 1430 aa18.53■□□□□ 0.56
SFXN3-205ENST00000470252 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.56
SFXN3-205ENST00000470252 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
SFXN3-205ENST00000470252 CUL7Q14999 1698 aa18.5■□□□□ 0.55
SFXN3-205ENST00000470252 ABCA10Q8WWZ4 1543 aa18.5■□□□□ 0.55
SFXN3-205ENST00000470252 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
SFXN3-205ENST00000470252 FMN1Q68DA7 1419 aa18.48■□□□□ 0.55
SFXN3-205ENST00000470252 PTPN23Q9H3S7 1636 aa18.48■□□□□ 0.55
SFXN3-205ENST00000470252 UACAQ9BZF9 1416 aa18.47■□□□□ 0.55
SFXN3-205ENST00000470252 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
SFXN3-205ENST00000470252 HFM1A2PYH4 1435 aa18.46■□□□□ 0.55
SFXN3-205ENST00000470252 POLA1P09884 1462 aaPredicted RBP18.46■□□□□ 0.55
SFXN3-205ENST00000470252 PTPRKQ15262 1439 aa18.45■□□□□ 0.54
SFXN3-205ENST00000470252 SNAPC4Q5SXM2 1469 aa18.45■□□□□ 0.54
SFXN3-205ENST00000470252 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
SFXN3-205ENST00000470252 THOC2Q8NI27 1593 aaKnown RBP18.44■□□□□ 0.54
SFXN3-205ENST00000470252 LRRIQ1Q96JM4 1722 aa18.44■□□□□ 0.54
SFXN3-205ENST00000470252 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
SFXN3-205ENST00000470252 MRC2Q9UBG0 1479 aa18.4■□□□□ 0.54
SFXN3-205ENST00000470252 NAIPQ13075 1403 aa18.4■□□□□ 0.54
SFXN3-205ENST00000470252 NCOA2Q15596 1464 aa18.38■□□□□ 0.53
SFXN3-205ENST00000470252 SUPT6HQ7KZ85 1726 aaKnown RBP18.38■□□□□ 0.53
SFXN3-205ENST00000470252 MYOM3Q5VTT5 1437 aa18.38■□□□□ 0.53
SFXN3-205ENST00000470252 SAMD9Q5K651 1589 aa18.36■□□□□ 0.53
SFXN3-205ENST00000470252 KDM5BQ9UGL1 1544 aa18.36■□□□□ 0.53
SFXN3-205ENST00000470252 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
SFXN3-205ENST00000470252 HNRNPUQ00839 825 aaKnown RBP eCLIP18.34■□□□□ 0.53
SFXN3-205ENST00000470252 GRIN2BQ13224 1484 aa18.33■□□□□ 0.53
SFXN3-205ENST00000470252 WDR62O43379 1518 aa18.32■□□□□ 0.52
SFXN3-205ENST00000470252 URB2Q14146 1524 aaKnown RBP18.32■□□□□ 0.52
SFXN3-205ENST00000470252 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
SFXN3-205ENST00000470252 HSPA5P11021 654 aaKnown RBP18.28■□□□□ 0.52
SFXN3-205ENST00000470252 RRP7BPQ9NSQ0 103 aa18.28■□□□□ 0.52
SFXN3-205ENST00000470252 GCC2Q8IWJ2 1684 aa18.28■□□□□ 0.52
SFXN3-205ENST00000470252 UGGT2Q9NYU1 1516 aa18.28■□□□□ 0.52
SFXN3-205ENST00000470252 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
SFXN3-205ENST00000470252 HECW1Q76N89 1606 aa18.27■□□□□ 0.52
SFXN3-205ENST00000470252 IRX6P78412 446 aaPredicted RBP18.27■□□□□ 0.52
SFXN3-205ENST00000470252 ABCA5Q8WWZ7 1642 aa18.27■□□□□ 0.52
SFXN3-205ENST00000470252 CHIC2Q9UKJ5 165 aa18.26■□□□□ 0.51
SFXN3-205ENST00000470252 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
SFXN3-205ENST00000470252 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
SFXN3-205ENST00000470252 ARHGEF11O15085 1522 aa18.24■□□□□ 0.51
SFXN3-205ENST00000470252 GAPVD1Q14C86 1478 aa18.23■□□□□ 0.51
SFXN3-205ENST00000470252 DENND4BO75064 1496 aaPredicted RBP18.22■□□□□ 0.51
SFXN3-205ENST00000470252 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
SFXN3-205ENST00000470252 KDM6BO15054 1643 aa18.21■□□□□ 0.51
SFXN3-205ENST00000470252 CDK11AQ9UQ88 783 aaPredicted RBP18.21■□□□□ 0.51
SFXN3-205ENST00000470252 TCOF1Q13428 1488 aaKnown RBP18.21■□□□□ 0.5
SFXN3-205ENST00000470252 MSH5O43196 834 aa18.2■□□□□ 0.5
SFXN3-205ENST00000470252 CNTLNQ9NXG0 1405 aa18.2■□□□□ 0.5
SFXN3-205ENST00000470252 CCDC184Q52MB2 194 aa18.17■□□□□ 0.5
SFXN3-205ENST00000470252 AKNAQ7Z591 1439 aa18.16■□□□□ 0.5
SFXN3-205ENST00000470252 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
SFXN3-205ENST00000470252 FANCIQ9NVI1 1328 aa18.15■□□□□ 0.5
SFXN3-205ENST00000470252 L3MBTL2Q969R5 705 aa18.14■□□□□ 0.49
SFXN3-205ENST00000470252 ERICH6BQ5W0A0 696 aa18.13■□□□□ 0.49
SFXN3-205ENST00000470252 FOXD1Q16676 465 aa18.12■□□□□ 0.49
SFXN3-205ENST00000470252 CCDC7Q96M83 1385 aa18.12■□□□□ 0.49
SFXN3-205ENST00000470252 C11orf95C9JLR9 678 aaPredicted RBP18.12■□□□□ 0.49
SFXN3-205ENST00000470252 FAM9BQ8IZU0 186 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms