RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 LRRC9Q6ZRR7 1453 aa14.88□□□□□ -0.03
SMC4-210ENST00000469762 SETD5Q9C0A6 1442 aa14.85□□□□□ -0.03
SMC4-210ENST00000469762 CFAP43Q8NDM7 1665 aa14.84□□□□□ -0.03
SMC4-210ENST00000469762 SIN3AQ96ST3 1273 aa14.83□□□□□ -0.04
SMC4-210ENST00000469762 PCF11O94913 1555 aaKnown RBP14.82□□□□□ -0.04
SMC4-210ENST00000469762 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
SMC4-210ENST00000469762 FGD5Q6ZNL6 1462 aa14.8□□□□□ -0.04
SMC4-210ENST00000469762 PPP1R15AO75807 674 aaPredicted RBP14.8□□□□□ -0.04
SMC4-210ENST00000469762 CC2D2AQ9P2K1 1620 aa14.79□□□□□ -0.04
SMC4-210ENST00000469762 DDX10Q13206 875 aaKnown RBP14.77□□□□□ -0.05
SMC4-210ENST00000469762 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
SMC4-210ENST00000469762 FHAD1B1AJZ9 1412 aa14.71□□□□□ -0.05
SMC4-210ENST00000469762 HIRIP3Q9BW71 556 aaPredicted RBP14.71□□□□□ -0.05
SMC4-210ENST00000469762 FAM50AQ14320 339 aaKnown RBP14.71□□□□□ -0.05
SMC4-210ENST00000469762 P3H3Q8IVL6 736 aa14.7□□□□□ -0.06
SMC4-210ENST00000469762 FHOD3Q2V2M9 1422 aa14.7□□□□□ -0.06
SMC4-210ENST00000469762 BCANQ96GW7 911 aa14.68□□□□□ -0.06
SMC4-210ENST00000469762 FYCO1Q9BQS8 1478 aa14.68□□□□□ -0.06
SMC4-210ENST00000469762 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.67□□□□□ -0.063e-9■■■■■ 72.1
SMC4-210ENST00000469762 TIMELESSQ9UNS1 1208 aa14.67□□□□□ -0.06
SMC4-210ENST00000469762 FKBP8Q14318 412 aa14.67□□□□□ -0.06
SMC4-210ENST00000469762 LRRIQ1Q96JM4 1722 aa14.67□□□□□ -0.06
SMC4-210ENST00000469762 PTPRKQ15262 1439 aa14.67□□□□□ -0.06
SMC4-210ENST00000469762 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
SMC4-210ENST00000469762 KDM5BQ9UGL1 1544 aa14.65□□□□□ -0.06
SMC4-210ENST00000469762 RAD54L2Q9Y4B4 1467 aa14.65□□□□□ -0.06
SMC4-210ENST00000469762 AQRO60306 1485 aaKnown RBP eCLIP14.65□□□□□ -0.074e-8■■■■■ 71.8
SMC4-210ENST00000469762 ANP32EQ9BTT0 268 aa14.64□□□□□ -0.07
SMC4-210ENST00000469762 SNAPC4Q5SXM2 1469 aa14.63□□□□□ -0.07
SMC4-210ENST00000469762 EFCAB5A4FU69 1503 aa14.63□□□□□ -0.07
SMC4-210ENST00000469762 CTTNBP2Q8WZ74 1663 aa14.63□□□□□ -0.07
SMC4-210ENST00000469762 ABCA10Q8WWZ4 1543 aa14.62□□□□□ -0.07
SMC4-210ENST00000469762 CCER2I3L3R5 266 aa14.62□□□□□ -0.07
SMC4-210ENST00000469762 FGD6Q6ZV73 1430 aa14.62□□□□□ -0.07
SMC4-210ENST00000469762 TRIM52Q96A61 297 aa14.61□□□□□ -0.07
SMC4-210ENST00000469762 FANCD2Q9BXW9 1451 aa14.6□□□□□ -0.07
SMC4-210ENST00000469762 PTPN23Q9H3S7 1636 aa14.6□□□□□ -0.07
SMC4-210ENST00000469762 POLA1P09884 1462 aaPredicted RBP14.6□□□□□ -0.07
SMC4-210ENST00000469762 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
SMC4-210ENST00000469762 DNMBPQ6XZF7 1577 aa14.59□□□□□ -0.07
SMC4-210ENST00000469762 ATP1B4Q9UN42 357 aaPredicted RBP14.58□□□□□ -0.08
SMC4-210ENST00000469762 HFM1A2PYH4 1435 aa14.58□□□□□ -0.08
SMC4-210ENST00000469762 TOPBP1Q92547 1522 aa14.57□□□□□ -0.08
SMC4-210ENST00000469762 CUL7Q14999 1698 aa14.57□□□□□ -0.08
SMC4-210ENST00000469762 UACAQ9BZF9 1416 aa14.56□□□□□ -0.08
SMC4-210ENST00000469762 NAIPQ13075 1403 aa14.55□□□□□ -0.08
SMC4-210ENST00000469762 DENND4BO75064 1496 aaPredicted RBP14.55□□□□□ -0.08
SMC4-210ENST00000469762 SAMD9Q5K651 1589 aa14.54□□□□□ -0.08
SMC4-210ENST00000469762 ANP32CO43423 234 aa14.54□□□□□ -0.08
SMC4-210ENST00000469762 RBM19Q9Y4C8 960 aaKnown RBP14.54□□□□□ -0.08
SMC4-210ENST00000469762 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
SMC4-210ENST00000469762 TONSLQ96HA7 1378 aa14.51□□□□□ -0.09
SMC4-210ENST00000469762 FMN1Q68DA7 1419 aa14.51□□□□□ -0.09
SMC4-210ENST00000469762 NESP48681 1621 aa14.51□□□□□ -0.09
SMC4-210ENST00000469762 NCOA2Q15596 1464 aa14.5□□□□□ -0.09
SMC4-210ENST00000469762 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
SMC4-210ENST00000469762 ARHGEF11O15085 1522 aa14.49□□□□□ -0.09
SMC4-210ENST00000469762 MYOM3Q5VTT5 1437 aa14.48□□□□□ -0.09
SMC4-210ENST00000469762 KDM6BO15054 1643 aa14.47□□□□□ -0.09
SMC4-210ENST00000469762 MTUS2Q5JR59 1369 aa14.46□□□□□ -0.09
SMC4-210ENST00000469762 ABCA5Q8WWZ7 1642 aa14.46□□□□□ -0.09
SMC4-210ENST00000469762 UGGT2Q9NYU1 1516 aa14.45□□□□□ -0.1
SMC4-210ENST00000469762 WASHC2AQ641Q2 1341 aa14.45□□□□□ -0.1
SMC4-210ENST00000469762 MSH5O43196 834 aa14.45□□□□□ -0.1
SMC4-210ENST00000469762 SUPT6HQ7KZ85 1726 aaKnown RBP14.45□□□□□ -0.1
SMC4-210ENST00000469762 URB2Q14146 1524 aaKnown RBP14.45□□□□□ -0.1
SMC4-210ENST00000469762 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
SMC4-210ENST00000469762 GCC2Q8IWJ2 1684 aa14.43□□□□□ -0.1
SMC4-210ENST00000469762 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
SMC4-210ENST00000469762 NEFLP07196 543 aa14.43□□□□□ -0.1
SMC4-210ENST00000469762 LAMC3Q9Y6N6 1575 aa14.42□□□□□ -0.1
SMC4-210ENST00000469762 HECW1Q76N89 1606 aa14.42□□□□□ -0.1
SMC4-210ENST00000469762 EHBP1L1Q8N3D4 1523 aa14.42□□□□□ -0.1
SMC4-210ENST00000469762 CCDC184Q52MB2 194 aa14.41□□□□□ -0.1
SMC4-210ENST00000469762 TCOF1Q13428 1488 aaKnown RBP14.41□□□□□ -0.1
SMC4-210ENST00000469762 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
SMC4-210ENST00000469762 HSPA5P11021 654 aaKnown RBP14.4□□□□□ -0.1
SMC4-210ENST00000469762 C11orf95C9JLR9 678 aaPredicted RBP14.38□□□□□ -0.11
SMC4-210ENST00000469762 HNRNPUQ00839 825 aaKnown RBP eCLIP14.38□□□□□ -0.112e-22■■■■■ 68.1
SMC4-210ENST00000469762 IRX6P78412 446 aaPredicted RBP14.37□□□□□ -0.11
SMC4-210ENST00000469762 RRP7BPQ9NSQ0 103 aa14.37□□□□□ -0.11
SMC4-210ENST00000469762 GAPVD1Q14C86 1478 aa14.36□□□□□ -0.11
SMC4-210ENST00000469762 CHIC2Q9UKJ5 165 aa14.34□□□□□ -0.11
SMC4-210ENST00000469762 AKNAQ7Z591 1439 aa14.34□□□□□ -0.11
SMC4-210ENST00000469762 CNTLNQ9NXG0 1405 aa14.33□□□□□ -0.12
SMC4-210ENST00000469762 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
SMC4-210ENST00000469762 TARBP1Q13395 1621 aaKnown RBP14.32□□□□□ -0.12
SMC4-210ENST00000469762 AEBP2Q6ZN18 517 aaPredicted RBP14.31□□□□□ -0.12
SMC4-210ENST00000469762 BCL11AQ9H165 835 aa14.31□□□□□ -0.12
SMC4-210ENST00000469762 L3MBTL2Q969R5 705 aa14.31□□□□□ -0.12
SMC4-210ENST00000469762 FOXD1Q16676 465 aa14.3□□□□□ -0.12
SMC4-210ENST00000469762 FANCIQ9NVI1 1328 aa14.3□□□□□ -0.12
SMC4-210ENST00000469762 EPRSP07814 1512 aaKnown RBP14.29□□□□□ -0.12
SMC4-210ENST00000469762 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
SMC4-210ENST00000469762 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
SMC4-210ENST00000469762 NBPF8Q3BBV2 869 aa14.29□□□□□ -0.12
SMC4-210ENST00000469762 CCDC7Q96M83 1385 aa14.29□□□□□ -0.12
SMC4-210ENST00000469762 TEX14Q8IWB6 1497 aa14.28□□□□□ -0.12
SMC4-210ENST00000469762 SPATA31E1Q6ZUB1 1445 aa14.28□□□□□ -0.12
SMC4-210ENST00000469762 PRKRIP1Q9H875 184 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms