RNA–Protein interactions for RNA: ENST00000469361.5

TRAPPC6B-203, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 4,533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-203ENST00000469361 CDK11AQ9UQ88 783 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC6B-203ENST00000469361 CUX2O14529 1486 aa11.62□□□□□ -0.55
TRAPPC6B-203ENST00000469361 VPS8Q8N3P4 1428 aa11.61□□□□□ -0.55
TRAPPC6B-203ENST00000469361 DDX10Q13206 875 aaKnown RBP11.61□□□□□ -0.55
TRAPPC6B-203ENST00000469361 ARID3CA6NKF2 412 aa11.59□□□□□ -0.55
TRAPPC6B-203ENST00000469361 FANCD2Q9BXW9 1451 aa11.58□□□□□ -0.56
TRAPPC6B-203ENST00000469361 ERICH3Q5RHP9 1530 aa11.57□□□□□ -0.56
TRAPPC6B-203ENST00000469361 CLSPNQ9HAW4 1339 aa11.57□□□□□ -0.56
TRAPPC6B-203ENST00000469361 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
TRAPPC6B-203ENST00000469361 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
TRAPPC6B-203ENST00000469361 FGD5Q6ZNL6 1462 aa11.54□□□□□ -0.56
TRAPPC6B-203ENST00000469361 CARMIL1Q5VZK9 1371 aa11.54□□□□□ -0.56
TRAPPC6B-203ENST00000469361 HIRIP3Q9BW71 556 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC6B-203ENST00000469361 PRDM2Q13029 1718 aa11.51□□□□□ -0.57
TRAPPC6B-203ENST00000469361 PDS5BQ9NTI5 1447 aa11.51□□□□□ -0.57
TRAPPC6B-203ENST00000469361 HNRNPUQ00839 825 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRAPPC6B-203ENST00000469361 IGF1RP08069 1367 aa11.49□□□□□ -0.57
TRAPPC6B-203ENST00000469361 NESP48681 1621 aa11.47□□□□□ -0.57
TRAPPC6B-203ENST00000469361 DNMBPQ6XZF7 1577 aa11.45□□□□□ -0.58
TRAPPC6B-203ENST00000469361 FAM9BQ8IZU0 186 aa11.45□□□□□ -0.58
TRAPPC6B-203ENST00000469361 TONSLQ96HA7 1378 aa11.45□□□□□ -0.58
TRAPPC6B-203ENST00000469361 IRX6P78412 446 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC6B-203ENST00000469361 TOPBP1Q92547 1522 aa11.44□□□□□ -0.58
TRAPPC6B-203ENST00000469361 LAMC3Q9Y6N6 1575 aa11.44□□□□□ -0.58
TRAPPC6B-203ENST00000469361 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
TRAPPC6B-203ENST00000469361 RAD54L2Q9Y4B4 1467 aa11.42□□□□□ -0.58
TRAPPC6B-203ENST00000469361 FBLN2P98095 1184 aa11.42□□□□□ -0.58
TRAPPC6B-203ENST00000469361 POLA1P09884 1462 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC6B-203ENST00000469361 ARAP1Q96P48 1450 aa11.4□□□□□ -0.58
TRAPPC6B-203ENST00000469361 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
TRAPPC6B-203ENST00000469361 ZNF777Q9ULD5 760 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC6B-203ENST00000469361 FHAD1B1AJZ9 1412 aa11.4□□□□□ -0.58
TRAPPC6B-203ENST00000469361 ANP32AP39687 249 aaKnown RBP11.39□□□□□ -0.59
TRAPPC6B-203ENST00000469361 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC6B-203ENST00000469361 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
TRAPPC6B-203ENST00000469361 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
TRAPPC6B-203ENST00000469361 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC6B-203ENST00000469361 ARHGAP35Q9NRY4 1499 aa11.38□□□□□ -0.59
TRAPPC6B-203ENST00000469361 ANO8Q9HCE9 1232 aaPredicted RBP11.34□□□□□ -0.59
TRAPPC6B-203ENST00000469361 NBR1Q14596 966 aa11.34□□□□□ -0.59
TRAPPC6B-203ENST00000469361 UBE2Q2Q8WVN8 375 aa11.33□□□□□ -0.6
TRAPPC6B-203ENST00000469361 GAPVD1Q14C86 1478 aa11.33□□□□□ -0.6
TRAPPC6B-203ENST00000469361 DNAJC5BQ9UF47 199 aa11.33□□□□□ -0.6
TRAPPC6B-203ENST00000469361 SENP3-EIF4A1A0A087X0R7 540 aa11.32□□□□□ -0.6
TRAPPC6B-203ENST00000469361 URB2Q14146 1524 aaKnown RBP11.32□□□□□ -0.6
TRAPPC6B-203ENST00000469361 CCNB3Q8WWL7 1395 aa11.32□□□□□ -0.6
TRAPPC6B-203ENST00000469361 MRS2Q9HD23 443 aa11.32□□□□□ -0.6
TRAPPC6B-203ENST00000469361 CUL7Q14999 1698 aa11.3□□□□□ -0.6
TRAPPC6B-203ENST00000469361 CCDC136Q96JN2 1154 aa11.3□□□□□ -0.6
TRAPPC6B-203ENST00000469361 FHOD3Q2V2M9 1422 aa11.29□□□□□ -0.6
TRAPPC6B-203ENST00000469361 CANXP27824 592 aaKnown RBP11.29□□□□□ -0.6
TRAPPC6B-203ENST00000469361 FMN1Q68DA7 1419 aa11.28□□□□□ -0.6
TRAPPC6B-203ENST00000469361 SIN3AQ96ST3 1273 aa11.28□□□□□ -0.6
TRAPPC6B-203ENST00000469361 ERCC6Q03468 1493 aa11.27□□□□□ -0.6
TRAPPC6B-203ENST00000469361 SUPT16HQ9Y5B9 1047 aaKnown RBP11.27□□□□□ -0.6
TRAPPC6B-203ENST00000469361 MTUS2Q5JR59 1369 aa11.27□□□□□ -0.61
TRAPPC6B-203ENST00000469361 TMC1Q8TDI8 760 aa11.27□□□□□ -0.61
TRAPPC6B-203ENST00000469361 EFCAB5A4FU69 1503 aa11.26□□□□□ -0.61
TRAPPC6B-203ENST00000469361 MRC2Q9UBG0 1479 aa11.26□□□□□ -0.61
TRAPPC6B-203ENST00000469361 RRP7BPQ9NSQ0 103 aa11.26□□□□□ -0.61
TRAPPC6B-203ENST00000469361 RRBP1Q9P2E9 1410 aaKnown RBP11.24□□□□□ -0.61
TRAPPC6B-203ENST00000469361 TIAM1Q13009 1591 aa11.23□□□□□ -0.61
TRAPPC6B-203ENST00000469361 KDM2AQ9Y2K7 1162 aa11.23□□□□□ -0.61
TRAPPC6B-203ENST00000469361 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
TRAPPC6B-203ENST00000469361 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
TRAPPC6B-203ENST00000469361 PODXL2Q9NZ53 605 aa11.22□□□□□ -0.61
TRAPPC6B-203ENST00000469361 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC6B-203ENST00000469361 KIF21AQ7Z4S6 1674 aa11.22□□□□□ -0.61
TRAPPC6B-203ENST00000469361 EIF4G2P78344 907 aaKnown RBP eCLIP11.21□□□□□ -0.61
TRAPPC6B-203ENST00000469361 CASKIN1Q8WXD9 1431 aa11.21□□□□□ -0.62
TRAPPC6B-203ENST00000469361 FYCO1Q9BQS8 1478 aa11.21□□□□□ -0.62
TRAPPC6B-203ENST00000469361 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
TRAPPC6B-203ENST00000469361 AQRO60306 1485 aaKnown RBP eCLIP11.2□□□□□ -0.62
TRAPPC6B-203ENST00000469361 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
TRAPPC6B-203ENST00000469361 GRIN2BQ13224 1484 aa11.19□□□□□ -0.62
TRAPPC6B-203ENST00000469361 TSHZ2Q9NRE2 1034 aa11.18□□□□□ -0.62
TRAPPC6B-203ENST00000469361 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
TRAPPC6B-203ENST00000469361 PCF11O94913 1555 aaKnown RBP11.17□□□□□ -0.62
TRAPPC6B-203ENST00000469361 CTTNBP2Q8WZ74 1663 aa11.17□□□□□ -0.62
TRAPPC6B-203ENST00000469361 ABCA5Q8WWZ7 1642 aa11.17□□□□□ -0.62
TRAPPC6B-203ENST00000469361 PLEKHG5O94827 1062 aa11.16□□□□□ -0.62
TRAPPC6B-203ENST00000469361 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
TRAPPC6B-203ENST00000469361 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
TRAPPC6B-203ENST00000469361 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAPPC6B-203ENST00000469361 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
TRAPPC6B-203ENST00000469361 PHLDB1Q86UU1 1377 aa11.15□□□□□ -0.62
TRAPPC6B-203ENST00000469361 RAB3GAP2Q9H2M9 1393 aa11.14□□□□□ -0.63
TRAPPC6B-203ENST00000469361 WDR97A6NE52 1622 aa11.13□□□□□ -0.63
TRAPPC6B-203ENST00000469361 ARXQ96QS3 562 aa11.13□□□□□ -0.63
TRAPPC6B-203ENST00000469361 CHGAP10645 457 aaKnown RBP11.11□□□□□ -0.63
TRAPPC6B-203ENST00000469361 TARBP1Q13395 1621 aaKnown RBP11.11□□□□□ -0.63
TRAPPC6B-203ENST00000469361 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
TRAPPC6B-203ENST00000469361 CFAP43Q8NDM7 1665 aa11.1□□□□□ -0.63
TRAPPC6B-203ENST00000469361 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
TRAPPC6B-203ENST00000469361 TSPY4P0CV99 314 aa11.08□□□□□ -0.63
TRAPPC6B-203ENST00000469361 TSPY10P0CW01 314 aa11.08□□□□□ -0.63
TRAPPC6B-203ENST00000469361 CCDC18Q5T9S5 1454 aa11.08□□□□□ -0.63
TRAPPC6B-203ENST00000469361 FGD6Q6ZV73 1430 aa11.08□□□□□ -0.64
TRAPPC6B-203ENST00000469361 RBM19Q9Y4C8 960 aaKnown RBP11.07□□□□□ -0.64
TRAPPC6B-203ENST00000469361 PBRM1Q86U86 1689 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms