RNA–Protein interactions for RNA: ENST00000469361.5

TRAPPC6B-203, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 4,533 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-203ENST00000469361 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
TRAPPC6B-203ENST00000469361 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
TRAPPC6B-203ENST00000469361 SUPT5HO00267 1087 aaKnown RBP14□□□□□ -0.17
TRAPPC6B-203ENST00000469361 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
TRAPPC6B-203ENST00000469361 CCDC180Q9P1Z9 1646 aa13.79□□□□□ -0.2
TRAPPC6B-203ENST00000469361 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
TRAPPC6B-203ENST00000469361 MYT1Q01538 1121 aa13.61□□□□□ -0.23
TRAPPC6B-203ENST00000469361 ZCCHC6Q5VYS8 1495 aaKnown RBP13.54□□□□□ -0.24
TRAPPC6B-203ENST00000469361 EHMT2Q96KQ7 1210 aa13.48□□□□□ -0.25
TRAPPC6B-203ENST00000469361 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
TRAPPC6B-203ENST00000469361 DCAF1Q9Y4B6 1507 aa13.21□□□□□ -0.29
TRAPPC6B-203ENST00000469361 FAM9AQ8IZU1 332 aaPredicted RBP13.18□□□□□ -0.3
TRAPPC6B-203ENST00000469361 ABCC9O60706 1549 aa13.07□□□□□ -0.32
TRAPPC6B-203ENST00000469361 TTBK1Q5TCY1 1321 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC6B-203ENST00000469361 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
TRAPPC6B-203ENST00000469361 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
TRAPPC6B-203ENST00000469361 NACADO15069 1562 aa12.88□□□□□ -0.35
TRAPPC6B-203ENST00000469361 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
TRAPPC6B-203ENST00000469361 CHIC1Q5VXU3 224 aa12.81□□□□□ -0.36
TRAPPC6B-203ENST00000469361 APLP2Q06481 763 aa12.81□□□□□ -0.36
TRAPPC6B-203ENST00000469361 HRCP23327 699 aa12.8□□□□□ -0.36
TRAPPC6B-203ENST00000469361 CCER1Q8TC90 406 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC6B-203ENST00000469361 PPARGC1BQ86YN6 1023 aaKnown RBP12.78□□□□□ -0.36
TRAPPC6B-203ENST00000469361 ZEB1P37275 1124 aaPredicted RBP12.77□□□□□ -0.36
TRAPPC6B-203ENST00000469361 RB1CC1Q8TDY2 1594 aa12.75□□□□□ -0.37
TRAPPC6B-203ENST00000469361 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
TRAPPC6B-203ENST00000469361 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC6B-203ENST00000469361 CENPBP07199 599 aaPredicted RBP12.71□□□□□ -0.38
TRAPPC6B-203ENST00000469361 TRIM26Q12899 539 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-203ENST00000469361 RSF1Q96T23 1441 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC6B-203ENST00000469361 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
TRAPPC6B-203ENST00000469361 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
TRAPPC6B-203ENST00000469361 CECR2Q9BXF3 1484 aa12.53□□□□□ -0.4
TRAPPC6B-203ENST00000469361 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC6B-203ENST00000469361 ERICH6Q7L0X2 663 aa12.48□□□□□ -0.41
TRAPPC6B-203ENST00000469361 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.41
TRAPPC6B-203ENST00000469361 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC6B-203ENST00000469361 ATP1B4Q9UN42 357 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC6B-203ENST00000469361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC6B-203ENST00000469361 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC6B-203ENST00000469361 WIZO95785 1651 aa12.36□□□□□ -0.43
TRAPPC6B-203ENST00000469361 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
TRAPPC6B-203ENST00000469361 SCAF1Q9H7N4 1312 aaKnown RBP12.32□□□□□ -0.44
TRAPPC6B-203ENST00000469361 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
TRAPPC6B-203ENST00000469361 SLC24A1O60721 1099 aa12.27□□□□□ -0.44
TRAPPC6B-203ENST00000469361 ITGAEP38570 1179 aa12.27□□□□□ -0.45
TRAPPC6B-203ENST00000469361 UNC13AQ9UPW8 1703 aa12.26□□□□□ -0.45
TRAPPC6B-203ENST00000469361 BCL11AQ9H165 835 aa12.26□□□□□ -0.45
TRAPPC6B-203ENST00000469361 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
TRAPPC6B-203ENST00000469361 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
TRAPPC6B-203ENST00000469361 NEFLP07196 543 aa12.25□□□□□ -0.45
TRAPPC6B-203ENST00000469361 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
TRAPPC6B-203ENST00000469361 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
TRAPPC6B-203ENST00000469361 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
TRAPPC6B-203ENST00000469361 BAZ1BQ9UIG0 1483 aaKnown RBP12.12□□□□□ -0.47
TRAPPC6B-203ENST00000469361 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
TRAPPC6B-203ENST00000469361 ATAD2BQ9ULI0 1458 aa12.08□□□□□ -0.48
TRAPPC6B-203ENST00000469361 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
TRAPPC6B-203ENST00000469361 CNGB1Q14028 1251 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-203ENST00000469361 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
TRAPPC6B-203ENST00000469361 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
TRAPPC6B-203ENST00000469361 WRNQ14191 1432 aaPredicted RBP eCLIP12.01□□□□□ -0.49
TRAPPC6B-203ENST00000469361 EEA1Q15075 1411 aa12□□□□□ -0.49
TRAPPC6B-203ENST00000469361 POLR3GLQ9BT43 218 aa11.99□□□□□ -0.49
TRAPPC6B-203ENST00000469361 ACIN1Q9UKV3 1341 aaKnown RBP11.98□□□□□ -0.49
TRAPPC6B-203ENST00000469361 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
TRAPPC6B-203ENST00000469361 BCANQ96GW7 911 aa11.95□□□□□ -0.5
TRAPPC6B-203ENST00000469361 ZNF316A6NFI3 1004 aaPredicted RBP11.93□□□□□ -0.5
TRAPPC6B-203ENST00000469361 SOGA1O94964 1423 aa11.92□□□□□ -0.5
TRAPPC6B-203ENST00000469361 NEUROD1Q13562 356 aa11.9□□□□□ -0.51
TRAPPC6B-203ENST00000469361 NCAPD3P42695 1498 aa11.9□□□□□ -0.51
TRAPPC6B-203ENST00000469361 FAM50AQ14320 339 aaKnown RBP11.88□□□□□ -0.51
TRAPPC6B-203ENST00000469361 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
TRAPPC6B-203ENST00000469361 GOLGA3Q08378 1498 aa11.87□□□□□ -0.51
TRAPPC6B-203ENST00000469361 HMGXB3Q12766 1538 aa11.85□□□□□ -0.51
TRAPPC6B-203ENST00000469361 CEP162Q5TB80 1403 aa11.84□□□□□ -0.51
TRAPPC6B-203ENST00000469361 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
TRAPPC6B-203ENST00000469361 RUSC2Q8N2Y8 1516 aa11.8□□□□□ -0.52
TRAPPC6B-203ENST00000469361 SYNJ1O43426 1573 aa11.79□□□□□ -0.52
TRAPPC6B-203ENST00000469361 ANP32EQ9BTT0 268 aa11.76□□□□□ -0.53
TRAPPC6B-203ENST00000469361 CLIP1P30622 1438 aa11.74□□□□□ -0.53
TRAPPC6B-203ENST00000469361 DAXXQ9UER7 740 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC6B-203ENST00000469361 TRIM52Q96A61 297 aa11.73□□□□□ -0.53
TRAPPC6B-203ENST00000469361 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
TRAPPC6B-203ENST00000469361 CADPSQ9ULU8 1353 aa11.72□□□□□ -0.53
TRAPPC6B-203ENST00000469361 ANP32CO43423 234 aa11.72□□□□□ -0.53
TRAPPC6B-203ENST00000469361 CFTRP13569 1480 aa11.72□□□□□ -0.53
TRAPPC6B-203ENST00000469361 TOP2BQ02880 1626 aa11.71□□□□□ -0.54
TRAPPC6B-203ENST00000469361 P3H3Q8IVL6 736 aa11.69□□□□□ -0.54
TRAPPC6B-203ENST00000469361 KIF21BO75037 1637 aa11.68□□□□□ -0.54
TRAPPC6B-203ENST00000469361 CC2D2AQ9P2K1 1620 aa11.67□□□□□ -0.54
TRAPPC6B-203ENST00000469361 MIER1Q8N108 512 aa11.66□□□□□ -0.54
TRAPPC6B-203ENST00000469361 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
TRAPPC6B-203ENST00000469361 MYT1LQ9UL68 1186 aa11.65□□□□□ -0.54
TRAPPC6B-203ENST00000469361 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.55
TRAPPC6B-203ENST00000469361 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.55
TRAPPC6B-203ENST00000469361 BIVM-ERCC5R4GMW8 1640 aa11.63□□□□□ -0.55
TRAPPC6B-203ENST00000469361 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
TRAPPC6B-203ENST00000469361 CUX1P39880 1505 aa11.63□□□□□ -0.55
TRAPPC6B-203ENST00000469361 FKBP8Q14318 412 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms