RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.7
SHANK2-214ENST00000468619 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
SHANK2-214ENST00000468619 PRXQ9BXM0 1461 aa19.35■□□□□ 0.69
SHANK2-214ENST00000468619 IGF1RP08069 1367 aa19.35■□□□□ 0.69
SHANK2-214ENST00000468619 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
SHANK2-214ENST00000468619 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.68
SHANK2-214ENST00000468619 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
SHANK2-214ENST00000468619 PRKCSHP14314 528 aaPredicted RBP19.31■□□□□ 0.68
SHANK2-214ENST00000468619 FKBP8Q14318 412 aa19.3■□□□□ 0.68
SHANK2-214ENST00000468619 ABCA5Q8WWZ7 1642 aa19.3■□□□□ 0.68
SHANK2-214ENST00000468619 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
SHANK2-214ENST00000468619 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
SHANK2-214ENST00000468619 GAPVD1Q14C86 1478 aa19.26■□□□□ 0.67
SHANK2-214ENST00000468619 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
SHANK2-214ENST00000468619 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
SHANK2-214ENST00000468619 RANGAP1P46060 587 aaPredicted RBP19.24■□□□□ 0.67
SHANK2-214ENST00000468619 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.674e-8■■■■■ 31.9
SHANK2-214ENST00000468619 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
SHANK2-214ENST00000468619 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
SHANK2-214ENST00000468619 CUL7Q14999 1698 aa19.2■□□□□ 0.66
SHANK2-214ENST00000468619 MSH5O43196 834 aa19.18■□□□□ 0.66
SHANK2-214ENST00000468619 ITGAEP38570 1179 aa19.18■□□□□ 0.66
SHANK2-214ENST00000468619 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
SHANK2-214ENST00000468619 CLIP1P30622 1438 aa19.13■□□□□ 0.65
SHANK2-214ENST00000468619 GRIN2BQ13224 1484 aa19.1■□□□□ 0.65
SHANK2-214ENST00000468619 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
SHANK2-214ENST00000468619 NEFLP07196 543 aa19.08■□□□□ 0.65
SHANK2-214ENST00000468619 APLP2Q06481 763 aa19.07■□□□□ 0.64
SHANK2-214ENST00000468619 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
SHANK2-214ENST00000468619 SNAPC4Q5SXM2 1469 aa19.03■□□□□ 0.64
SHANK2-214ENST00000468619 CTTNBP2Q8WZ74 1663 aa19.03■□□□□ 0.64
SHANK2-214ENST00000468619 ERICH6Q7L0X2 663 aa19.02■□□□□ 0.64
SHANK2-214ENST00000468619 FHAD1B1AJZ9 1412 aa19.02■□□□□ 0.64
SHANK2-214ENST00000468619 ARAP1Q96P48 1450 aa18.96■□□□□ 0.63
SHANK2-214ENST00000468619 ARHGAP35Q9NRY4 1499 aa18.96■□□□□ 0.63
SHANK2-214ENST00000468619 TRIM52Q96A61 297 aa18.96■□□□□ 0.63
SHANK2-214ENST00000468619 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
SHANK2-214ENST00000468619 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
SHANK2-214ENST00000468619 DDX10Q13206 875 aaKnown RBP18.93■□□□□ 0.62
SHANK2-214ENST00000468619 FBLN2P98095 1184 aa18.91■□□□□ 0.62
SHANK2-214ENST00000468619 FANCIQ9NVI1 1328 aa18.91■□□□□ 0.62
SHANK2-214ENST00000468619 P3H3Q8IVL6 736 aa18.9■□□□□ 0.62
SHANK2-214ENST00000468619 GRIN2AQ12879 1464 aa18.89■□□□□ 0.61
SHANK2-214ENST00000468619 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
SHANK2-214ENST00000468619 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
SHANK2-214ENST00000468619 SYNJ2O15056 1496 aa18.88■□□□□ 0.61
SHANK2-214ENST00000468619 ANO8Q9HCE9 1232 aaPredicted RBP18.83■□□□□ 0.61
SHANK2-214ENST00000468619 IQGAP2Q13576 1575 aa18.83■□□□□ 0.61
SHANK2-214ENST00000468619 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.6
SHANK2-214ENST00000468619 FHOD3Q2V2M9 1422 aa18.83■□□□□ 0.6
SHANK2-214ENST00000468619 EFCAB5A4FU69 1503 aa18.82■□□□□ 0.6
SHANK2-214ENST00000468619 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
SHANK2-214ENST00000468619 CEP170Q5SW79 1584 aa18.81■□□□□ 0.6
SHANK2-214ENST00000468619 SAMD9Q5K651 1589 aa18.79■□□□□ 0.6
SHANK2-214ENST00000468619 CHD1O14646 1710 aa18.78■□□□□ 0.6
SHANK2-214ENST00000468619 MYT1LQ9UL68 1186 aa18.76■□□□□ 0.59
SHANK2-214ENST00000468619 KIAA0586Q9BVV6 1533 aa18.76■□□□□ 0.59
SHANK2-214ENST00000468619 HIRIP3Q9BW71 556 aaPredicted RBP18.75■□□□□ 0.59
SHANK2-214ENST00000468619 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
SHANK2-214ENST00000468619 PCF11O94913 1555 aaKnown RBP18.72■□□□□ 0.59
SHANK2-214ENST00000468619 NUP160Q12769 1436 aa18.72■□□□□ 0.59
SHANK2-214ENST00000468619 PPP1R15AO75807 674 aaPredicted RBP18.71■□□□□ 0.59
SHANK2-214ENST00000468619 ATP1B4Q9UN42 357 aaPredicted RBP18.7■□□□□ 0.58
SHANK2-214ENST00000468619 NBR1Q14596 966 aa18.7■□□□□ 0.58
SHANK2-214ENST00000468619 UGGT2Q9NYU1 1516 aa18.7■□□□□ 0.58
SHANK2-214ENST00000468619 ANP32CO43423 234 aa18.7■□□□□ 0.58
SHANK2-214ENST00000468619 CCER2I3L3R5 266 aa18.68■□□□□ 0.58
SHANK2-214ENST00000468619 FMN1Q68DA7 1419 aa18.66■□□□□ 0.58
SHANK2-214ENST00000468619 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
SHANK2-214ENST00000468619 KIAA0556O60303 1618 aa18.65■□□□□ 0.58
SHANK2-214ENST00000468619 SALL2Q9Y467 1007 aaPredicted RBP18.64■□□□□ 0.58
SHANK2-214ENST00000468619 SIN3AQ96ST3 1273 aa18.63■□□□□ 0.57
SHANK2-214ENST00000468619 FYCO1Q9BQS8 1478 aa18.62■□□□□ 0.57
SHANK2-214ENST00000468619 CASKIN1Q8WXD9 1431 aa18.62■□□□□ 0.57
SHANK2-214ENST00000468619 JPH4Q96JJ6 628 aa18.62■□□□□ 0.57
SHANK2-214ENST00000468619 TIAM1Q13009 1591 aa18.61■□□□□ 0.57
SHANK2-214ENST00000468619 HNRNPUQ00839 825 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHANK2-214ENST00000468619 LRRIQ1Q96JM4 1722 aa18.59■□□□□ 0.57
SHANK2-214ENST00000468619 RRBP1Q9P2E9 1410 aaKnown RBP18.58■□□□□ 0.57
SHANK2-214ENST00000468619 MAPKBP1O60336 1514 aa18.58■□□□□ 0.57
SHANK2-214ENST00000468619 RAB3GAP2Q9H2M9 1393 aa18.58■□□□□ 0.56
SHANK2-214ENST00000468619 CFAP43Q8NDM7 1665 aa18.58■□□□□ 0.56
SHANK2-214ENST00000468619 PAK3O75914 559 aaPredicted RBP18.57■□□□□ 0.56
SHANK2-214ENST00000468619 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
SHANK2-214ENST00000468619 NOP58Q9Y2X3 529 aaKnown RBP18.57■□□□□ 0.56
SHANK2-214ENST00000468619 CCNB3Q8WWL7 1395 aa18.56■□□□□ 0.56
SHANK2-214ENST00000468619 MAP3K1Q13233 1512 aa18.53■□□□□ 0.56
SHANK2-214ENST00000468619 CARMIL2Q6F5E8 1435 aa18.53■□□□□ 0.56
SHANK2-214ENST00000468619 ARID3CA6NKF2 412 aa18.52■□□□□ 0.55
SHANK2-214ENST00000468619 PPP4R2Q9NY27 417 aa18.52■□□□□ 0.55
SHANK2-214ENST00000468619 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.55
SHANK2-214ENST00000468619 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
SHANK2-214ENST00000468619 PRG4Q92954 1404 aaPredicted RBP18.51■□□□□ 0.55
SHANK2-214ENST00000468619 RTN4Q9NQC3 1192 aaKnown RBP18.5■□□□□ 0.55
SHANK2-214ENST00000468619 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
SHANK2-214ENST00000468619 IL27Q8NEV9 243 aa18.49■□□□□ 0.55
SHANK2-214ENST00000468619 SHROOM2Q13796 1616 aa18.48■□□□□ 0.55
SHANK2-214ENST00000468619 ERICH6BQ5W0A0 696 aa18.48■□□□□ 0.55
SHANK2-214ENST00000468619 CLASP1Q7Z460 1538 aa18.48■□□□□ 0.55
SHANK2-214ENST00000468619 RAPGEF6Q8TEU7 1601 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms