RNA–Protein interactions for RNA: ENST00000468342.1

APPL1-204, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

TSL 2

Gene APPL1, Length 419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-204ENST00000468342 ABCC8Q09428 1581 aa13.69□□□□□ -0.22
APPL1-204ENST00000468342 CYB5RLQ6IPT4 315 aa13.68□□□□□ -0.22
APPL1-204ENST00000468342 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
APPL1-204ENST00000468342 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
APPL1-204ENST00000468342 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
APPL1-204ENST00000468342 CUX1P39880 1505 aa13.67□□□□□ -0.22
APPL1-204ENST00000468342 IFT140Q96RY7 1462 aa13.67□□□□□ -0.22
APPL1-204ENST00000468342 DSG3P32926 999 aa13.66□□□□□ -0.22
APPL1-204ENST00000468342 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
APPL1-204ENST00000468342 TARBP1Q13395 1621 aaKnown RBP13.65□□□□□ -0.22
APPL1-204ENST00000468342 RAD54L2Q9Y4B4 1467 aa13.65□□□□□ -0.22
APPL1-204ENST00000468342 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
APPL1-204ENST00000468342 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.23
APPL1-204ENST00000468342 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
APPL1-204ENST00000468342 SOGA1O94964 1423 aa13.6□□□□□ -0.23
APPL1-204ENST00000468342 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
APPL1-204ENST00000468342 FBLN2P98095 1184 aa13.58□□□□□ -0.24
APPL1-204ENST00000468342 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
APPL1-204ENST00000468342 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
APPL1-204ENST00000468342 SYNJ1O43426 1573 aa13.53□□□□□ -0.24
APPL1-204ENST00000468342 ZBTB12Q9Y330 459 aaPredicted RBP13.51□□□□□ -0.25
APPL1-204ENST00000468342 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
APPL1-204ENST00000468342 WRNQ14191 1432 aaPredicted RBP eCLIP13.5□□□□□ -0.25
APPL1-204ENST00000468342 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
APPL1-204ENST00000468342 CHD1O14646 1710 aa13.49□□□□□ -0.25
APPL1-204ENST00000468342 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
APPL1-204ENST00000468342 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
APPL1-204ENST00000468342 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
APPL1-204ENST00000468342 ABCA10Q8WWZ4 1543 aa13.44□□□□□ -0.26
APPL1-204ENST00000468342 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
APPL1-204ENST00000468342 GAPVD1Q14C86 1478 aa13.43□□□□□ -0.26
APPL1-204ENST00000468342 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
APPL1-204ENST00000468342 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
APPL1-204ENST00000468342 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
APPL1-204ENST00000468342 PROM2Q8N271 834 aa13.4□□□□□ -0.26
APPL1-204ENST00000468342 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
APPL1-204ENST00000468342 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
APPL1-204ENST00000468342 SYNJ2O15056 1496 aa13.34□□□□□ -0.27
APPL1-204ENST00000468342 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
APPL1-204ENST00000468342 ADAMTS12P58397 1594 aa13.29□□□□□ -0.28
APPL1-204ENST00000468342 GRIN2AQ12879 1464 aa13.26□□□□□ -0.29
APPL1-204ENST00000468342 ERICH3Q5RHP9 1530 aa13.26□□□□□ -0.29
APPL1-204ENST00000468342 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
APPL1-204ENST00000468342 FHAD1B1AJZ9 1412 aa13.25□□□□□ -0.29
APPL1-204ENST00000468342 IGF1RP08069 1367 aa13.23□□□□□ -0.29
APPL1-204ENST00000468342 CEP170Q5SW79 1584 aa13.23□□□□□ -0.29
APPL1-204ENST00000468342 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
APPL1-204ENST00000468342 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
APPL1-204ENST00000468342 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
APPL1-204ENST00000468342 KIF27Q86VH2 1401 aa13.21□□□□□ -0.3
APPL1-204ENST00000468342 RUSC2Q8N2Y8 1516 aa13.2□□□□□ -0.3
APPL1-204ENST00000468342 ZNF692Q9BU19 519 aaPredicted RBP13.2□□□□□ -0.3
APPL1-204ENST00000468342 SSUH2Q9Y2M2 353 aa13.2□□□□□ -0.3
APPL1-204ENST00000468342 NUP160Q12769 1436 aa13.2□□□□□ -0.3
APPL1-204ENST00000468342 ERCC6L2Q5T890 1561 aa13.19□□□□□ -0.3
APPL1-204ENST00000468342 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
APPL1-204ENST00000468342 CARMIL1Q5VZK9 1371 aa13.12□□□□□ -0.31
APPL1-204ENST00000468342 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
APPL1-204ENST00000468342 SHROOM2Q13796 1616 aa13.12□□□□□ -0.31
APPL1-204ENST00000468342 CUL7Q14999 1698 aa13.12□□□□□ -0.31
APPL1-204ENST00000468342 JPH4Q96JJ6 628 aa13.11□□□□□ -0.31
APPL1-204ENST00000468342 KDM4FA0A1W2PPD8 638 aa13.08□□□□□ -0.32
APPL1-204ENST00000468342 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
APPL1-204ENST00000468342 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
APPL1-204ENST00000468342 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
APPL1-204ENST00000468342 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
APPL1-204ENST00000468342 RAPGEF2Q9Y4G8 1499 aa13.01□□□□□ -0.33
APPL1-204ENST00000468342 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
APPL1-204ENST00000468342 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
APPL1-204ENST00000468342 IQGAP2Q13576 1575 aa12.96□□□□□ -0.33
APPL1-204ENST00000468342 PRXQ9BXM0 1461 aa12.96□□□□□ -0.34
APPL1-204ENST00000468342 IFNLR1Q8IU57 520 aaPredicted RBP12.93□□□□□ -0.34
APPL1-204ENST00000468342 CTTNBP2Q8WZ74 1663 aa12.92□□□□□ -0.34
APPL1-204ENST00000468342 DISP1Q96F81 1524 aa12.92□□□□□ -0.34
APPL1-204ENST00000468342 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
APPL1-204ENST00000468342 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
APPL1-204ENST00000468342 ADCY10Q96PN6 1610 aa12.91□□□□□ -0.34
APPL1-204ENST00000468342 PTPRGP23470 1445 aa12.89□□□□□ -0.35
APPL1-204ENST00000468342 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
APPL1-204ENST00000468342 UGGT2Q9NYU1 1516 aa12.88□□□□□ -0.35
APPL1-204ENST00000468342 CARMIL2Q6F5E8 1435 aa12.88□□□□□ -0.35
APPL1-204ENST00000468342 TNIKQ9UKE5 1360 aa12.87□□□□□ -0.35
APPL1-204ENST00000468342 AKT1S1Q96B36 256 aa12.86□□□□□ -0.35
APPL1-204ENST00000468342 KIF13AQ9H1H9 1805 aa12.85□□□□□ -0.35
APPL1-204ENST00000468342 ABCC10Q5T3U5 1492 aa12.85□□□□□ -0.35
APPL1-204ENST00000468342 KIAA0556O60303 1618 aa12.84□□□□□ -0.35
APPL1-204ENST00000468342 EEA1Q15075 1411 aa12.84□□□□□ -0.35
APPL1-204ENST00000468342 P3H3Q8IVL6 736 aa12.83□□□□□ -0.36
APPL1-204ENST00000468342 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
APPL1-204ENST00000468342 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
APPL1-204ENST00000468342 UACAQ9BZF9 1416 aa12.79□□□□□ -0.36
APPL1-204ENST00000468342 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
APPL1-204ENST00000468342 MAPKBP1O60336 1514 aa12.78□□□□□ -0.36
APPL1-204ENST00000468342 KIF21BO75037 1637 aa12.77□□□□□ -0.36
APPL1-204ENST00000468342 ABCC2Q92887 1545 aa12.77□□□□□ -0.37
APPL1-204ENST00000468342 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
APPL1-204ENST00000468342 UHRF1BP1LA0JNW5 1464 aa12.76□□□□□ -0.37
APPL1-204ENST00000468342 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
APPL1-204ENST00000468342 TSPOAP1O95153 1857 aa12.74□□□□□ -0.37
APPL1-204ENST00000468342 DIP2BQ9P265 1576 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms