RNA–Protein interactions for RNA: ENST00000468342.1

APPL1-204, Transcript of adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1, humanhuman

TSL 2

Gene APPL1, Length 419 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1-204ENST00000468342 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
APPL1-204ENST00000468342 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
APPL1-204ENST00000468342 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
APPL1-204ENST00000468342 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
APPL1-204ENST00000468342 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
APPL1-204ENST00000468342 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
APPL1-204ENST00000468342 FOXD1Q16676 465 aa18.14■□□□□ 0.49
APPL1-204ENST00000468342 PPP6R1Q9UPN7 881 aa17.73■□□□□ 0.43
APPL1-204ENST00000468342 ADRA2BP18089 450 aa17.69■□□□□ 0.42
APPL1-204ENST00000468342 PIAS4Q8N2W9 510 aaPredicted RBP17.11■□□□□ 0.33
APPL1-204ENST00000468342 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
APPL1-204ENST00000468342 ABCC9O60706 1549 aa16.72■□□□□ 0.27
APPL1-204ENST00000468342 MSH5O43196 834 aa16.52■□□□□ 0.24
APPL1-204ENST00000468342 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
APPL1-204ENST00000468342 KCNA4P22459 653 aa16.49■□□□□ 0.23
APPL1-204ENST00000468342 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
APPL1-204ENST00000468342 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
APPL1-204ENST00000468342 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
APPL1-204ENST00000468342 MAPK8IP2Q13387 824 aaPredicted RBP15.98■□□□□ 0.15
APPL1-204ENST00000468342 CNKSR2Q8WXI2 1034 aa15.95■□□□□ 0.14
APPL1-204ENST00000468342 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
APPL1-204ENST00000468342 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
APPL1-204ENST00000468342 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
APPL1-204ENST00000468342 NACADO15069 1562 aa15.76■□□□□ 0.11
APPL1-204ENST00000468342 SLC4A1APQ9BWU0 796 aaKnown RBP15.7■□□□□ 0.1
APPL1-204ENST00000468342 ZCCHC6Q5VYS8 1495 aaKnown RBP15.66■□□□□ 0.1
APPL1-204ENST00000468342 DMRT2Q9Y5R5 561 aa15.65■□□□□ 0.1
APPL1-204ENST00000468342 MYO15BQ96JP2 1530 aa15.6■□□□□ 0.09
APPL1-204ENST00000468342 EHMT2Q96KQ7 1210 aa15.6■□□□□ 0.09
APPL1-204ENST00000468342 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
APPL1-204ENST00000468342 UNC13AQ9UPW8 1703 aa15.59■□□□□ 0.09
APPL1-204ENST00000468342 RNF216Q9NWF9 866 aaPredicted RBP15.57■□□□□ 0.08
APPL1-204ENST00000468342 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
APPL1-204ENST00000468342 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
APPL1-204ENST00000468342 DNAJC5Q9H3Z4 198 aa15.44■□□□□ 0.06
APPL1-204ENST00000468342 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
APPL1-204ENST00000468342 CSRNP3Q8WYN3 585 aa15.36■□□□□ 0.05
APPL1-204ENST00000468342 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
APPL1-204ENST00000468342 ZBTB22O15209 634 aa15.23■□□□□ 0.03
APPL1-204ENST00000468342 CECR2Q9BXF3 1484 aa15.13■□□□□ 0.01
APPL1-204ENST00000468342 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0
APPL1-204ENST00000468342 FOXD4L1Q9NU39 408 aa15.04■□□□□ -0
APPL1-204ENST00000468342 SLC4A2P04920 1241 aa15.02■□□□□ -0
APPL1-204ENST00000468342 CC2D2AQ9P2K1 1620 aa15□□□□□ -0.01
APPL1-204ENST00000468342 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
APPL1-204ENST00000468342 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
APPL1-204ENST00000468342 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
APPL1-204ENST00000468342 MYCNP04198 464 aaPredicted RBP14.67□□□□□ -0.06
APPL1-204ENST00000468342 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
APPL1-204ENST00000468342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
APPL1-204ENST00000468342 CUX2O14529 1486 aa14.61□□□□□ -0.07
APPL1-204ENST00000468342 ATAD2BQ9ULI0 1458 aa14.6□□□□□ -0.07
APPL1-204ENST00000468342 MROH2BQ7Z745 1585 aa14.58□□□□□ -0.08
APPL1-204ENST00000468342 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
APPL1-204ENST00000468342 BAZ1AQ9NRL2 1556 aaPredicted RBP14.57□□□□□ -0.08
APPL1-204ENST00000468342 U3KPZ7 1027 aaPredicted RBP14.54□□□□□ -0.08
APPL1-204ENST00000468342 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
APPL1-204ENST00000468342 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
APPL1-204ENST00000468342 PEG3Q9GZU2 1588 aa14.47□□□□□ -0.09
APPL1-204ENST00000468342 HMGXB3Q12766 1538 aa14.46□□□□□ -0.09
APPL1-204ENST00000468342 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
APPL1-204ENST00000468342 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
APPL1-204ENST00000468342 WIZO95785 1651 aa14.43□□□□□ -0.1
APPL1-204ENST00000468342 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
APPL1-204ENST00000468342 RSF1Q96T23 1441 aaPredicted RBP14.36□□□□□ -0.11
APPL1-204ENST00000468342 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
APPL1-204ENST00000468342 NESP48681 1621 aa14.35□□□□□ -0.11
APPL1-204ENST00000468342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
APPL1-204ENST00000468342 HNRNPUL2Q1KMD3 747 aaKnown RBP14.34□□□□□ -0.11
APPL1-204ENST00000468342 SAMD1Q6SPF0 538 aaPredicted RBP14.33□□□□□ -0.12
APPL1-204ENST00000468342 RNF39Q9H2S5 420 aa14.24□□□□□ -0.13
APPL1-204ENST00000468342 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
APPL1-204ENST00000468342 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
APPL1-204ENST00000468342 CADPSQ9ULU8 1353 aa14.16□□□□□ -0.14
APPL1-204ENST00000468342 KIF21AQ7Z4S6 1674 aa14.16□□□□□ -0.14
APPL1-204ENST00000468342 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
APPL1-204ENST00000468342 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
APPL1-204ENST00000468342 CCDC88BA6NC98 1476 aa14.08□□□□□ -0.16
APPL1-204ENST00000468342 APLP2Q06481 763 aa14.08□□□□□ -0.16
APPL1-204ENST00000468342 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
APPL1-204ENST00000468342 CFTRP13569 1480 aa14.05□□□□□ -0.16
APPL1-204ENST00000468342 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
APPL1-204ENST00000468342 ZNF219Q9P2Y4 722 aaPredicted RBP14.02□□□□□ -0.17
APPL1-204ENST00000468342 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
APPL1-204ENST00000468342 SUPT5HO00267 1087 aaKnown RBP13.99□□□□□ -0.17
APPL1-204ENST00000468342 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
APPL1-204ENST00000468342 CEP164Q9UPV0 1460 aa13.97□□□□□ -0.17
APPL1-204ENST00000468342 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
APPL1-204ENST00000468342 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
APPL1-204ENST00000468342 WDR62O43379 1518 aa13.93□□□□□ -0.18
APPL1-204ENST00000468342 TRHP20396 242 aaPredicted RBP13.91□□□□□ -0.18
APPL1-204ENST00000468342 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
APPL1-204ENST00000468342 CAPN15O75808 1086 aa13.89□□□□□ -0.19
APPL1-204ENST00000468342 FKBP8Q14318 412 aa13.8□□□□□ -0.2
APPL1-204ENST00000468342 POLA2Q14181 598 aa13.78□□□□□ -0.2
APPL1-204ENST00000468342 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
APPL1-204ENST00000468342 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
APPL1-204ENST00000468342 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
APPL1-204ENST00000468342 ZNF608Q9ULD9 1512 aaPredicted RBP13.7□□□□□ -0.22
APPL1-204ENST00000468342 ABCB7O75027 752 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms