RNA–Protein interactions for RNA: ENST00000467235.1

MUC4-212, Transcript of mucin 4, cell surface associated, humanhuman

TSL 2

Gene MUC4, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-212ENST00000467235 ITGAEP38570 1179 aa22.04■■□□□ 1.12
MUC4-212ENST00000467235 CEP162Q5TB80 1403 aa21.99■■□□□ 1.11
MUC4-212ENST00000467235 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
MUC4-212ENST00000467235 CDK11AQ9UQ88 783 aaPredicted RBP21.94■■□□□ 1.1
MUC4-212ENST00000467235 KCNH8Q96L42 1107 aa21.94■■□□□ 1.1
MUC4-212ENST00000467235 HNRNPUL2Q1KMD3 747 aaKnown RBP21.93■■□□□ 1.1
MUC4-212ENST00000467235 CUX1P39880 1505 aa21.93■■□□□ 1.1
MUC4-212ENST00000467235 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.1
MUC4-212ENST00000467235 TARBP1Q13395 1621 aaKnown RBP21.87■■□□□ 1.09
MUC4-212ENST00000467235 FGD5Q6ZNL6 1462 aa21.84■■□□□ 1.09
MUC4-212ENST00000467235 BIVM-ERCC5R4GMW8 1640 aa21.84■■□□□ 1.09
MUC4-212ENST00000467235 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
MUC4-212ENST00000467235 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.82■■□□□ 1.08
MUC4-212ENST00000467235 TNIKQ9UKE5 1360 aa21.82■■□□□ 1.08
MUC4-212ENST00000467235 TOP2BQ02880 1626 aa21.81■■□□□ 1.08
MUC4-212ENST00000467235 IL27Q8NEV9 243 aa21.81■■□□□ 1.08
MUC4-212ENST00000467235 PLEKHG5O94827 1062 aa21.79■■□□□ 1.08
MUC4-212ENST00000467235 NOP58Q9Y2X3 529 aaKnown RBP21.78■■□□□ 1.08
MUC4-212ENST00000467235 EIF4G3O43432 1585 aaKnown RBP21.77■■□□□ 1.08
MUC4-212ENST00000467235 NBR1Q14596 966 aa21.77■■□□□ 1.08
MUC4-212ENST00000467235 SOGA1O94964 1423 aa21.77■■□□□ 1.08
MUC4-212ENST00000467235 ZNF608Q9ULD9 1512 aaPredicted RBP21.77■■□□□ 1.08
MUC4-212ENST00000467235 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
MUC4-212ENST00000467235 RAD54L2Q9Y4B4 1467 aa21.74■■□□□ 1.07
MUC4-212ENST00000467235 DHX57Q6P158 1386 aaKnown RBP21.72■■□□□ 1.07
MUC4-212ENST00000467235 PKNOX2Q96KN3 472 aa21.71■■□□□ 1.07
MUC4-212ENST00000467235 RTN4Q9NQC3 1192 aaKnown RBP21.7■■□□□ 1.06
MUC4-212ENST00000467235 RTL5Q5HYW3 569 aaPredicted RBP21.69■■□□□ 1.06
MUC4-212ENST00000467235 ABCA10Q8WWZ4 1543 aa21.68■■□□□ 1.06
MUC4-212ENST00000467235 AQRO60306 1485 aaKnown RBP eCLIP21.64■■□□□ 1.05
MUC4-212ENST00000467235 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
MUC4-212ENST00000467235 PAK3O75914 559 aaPredicted RBP21.61■■□□□ 1.05
MUC4-212ENST00000467235 TRIM52Q96A61 297 aa21.6■■□□□ 1.05
MUC4-212ENST00000467235 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
MUC4-212ENST00000467235 CCER2I3L3R5 266 aa21.59■■□□□ 1.05
MUC4-212ENST00000467235 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.05
MUC4-212ENST00000467235 PBRM1Q86U86 1689 aa21.58■■□□□ 1.04
MUC4-212ENST00000467235 GRIN2BQ13224 1484 aa21.56■■□□□ 1.04
MUC4-212ENST00000467235 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
MUC4-212ENST00000467235 MAGI1Q96QZ7 1491 aaPredicted RBP21.53■■□□□ 1.04
MUC4-212ENST00000467235 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
MUC4-212ENST00000467235 PPP4R2Q9NY27 417 aa21.5■■□□□ 1.03
MUC4-212ENST00000467235 SNAPC4Q5SXM2 1469 aa21.5■■□□□ 1.03
MUC4-212ENST00000467235 CHD1O14646 1710 aa21.5■■□□□ 1.03
MUC4-212ENST00000467235 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
MUC4-212ENST00000467235 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
MUC4-212ENST00000467235 UBTFP17480 764 aaKnown RBP21.45■■□□□ 1.02
MUC4-212ENST00000467235 EEA1Q15075 1411 aa21.45■■□□□ 1.02
MUC4-212ENST00000467235 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
MUC4-212ENST00000467235 IRX6P78412 446 aaPredicted RBP21.44■■□□□ 1.02
MUC4-212ENST00000467235 OSCARQ8IYS5 282 aa21.44■■□□□ 1.02
MUC4-212ENST00000467235 IPO9Q96P70 1041 aaKnown RBP21.43■■□□□ 1.02
MUC4-212ENST00000467235 SYNJ2O15056 1496 aa21.42■■□□□ 1.02
MUC4-212ENST00000467235 GOLGA3Q08378 1498 aa21.42■■□□□ 1.02
MUC4-212ENST00000467235 PPP1R15AO75807 674 aaPredicted RBP21.41■■□□□ 1.02
MUC4-212ENST00000467235 WASHC2CQ9Y4E1 1318 aa21.4■■□□□ 1.02
MUC4-212ENST00000467235 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
MUC4-212ENST00000467235 ANP32AP39687 249 aaKnown RBP21.39■■□□□ 1.01
MUC4-212ENST00000467235 ANP32CO43423 234 aa21.38■■□□□ 1.01
MUC4-212ENST00000467235 ZBTB47Q9UFB7 747 aaPredicted RBP21.37■■□□□ 1.01
MUC4-212ENST00000467235 KIF27Q86VH2 1401 aa21.35■■□□□ 1.01
MUC4-212ENST00000467235 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
MUC4-212ENST00000467235 USP35Q9P2H5 1018 aa21.35■■□□□ 1.01
MUC4-212ENST00000467235 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1
MUC4-212ENST00000467235 CHMP7Q8WUX9 453 aaPredicted RBP21.31■■□□□ 1
MUC4-212ENST00000467235 RSPH6AQ9H0K4 717 aa21.31■■□□□ 1
MUC4-212ENST00000467235 CLIP1P30622 1438 aa21.31■■□□□ 1
MUC4-212ENST00000467235 CUL7Q14999 1698 aa21.3■■□□□ 1
MUC4-212ENST00000467235 FBLN2P98095 1184 aa21.29■■□□□ 1
MUC4-212ENST00000467235 GLIPR1L2Q4G1C9 344 aa21.29■■□□□ 1
MUC4-212ENST00000467235 GRIN2AQ12879 1464 aa21.28■■□□□ 1
MUC4-212ENST00000467235 PODXL2Q9NZ53 605 aa21.28■■□□□ 1
MUC4-212ENST00000467235 CLASP1Q7Z460 1538 aa21.27■■□□□ 1
MUC4-212ENST00000467235 B4GALNT3Q6L9W6 998 aa21.26■□□□□ 0.99
MUC4-212ENST00000467235 HNRNPUQ00839 825 aaKnown RBP eCLIP21.23■□□□□ 0.99
MUC4-212ENST00000467235 BRPF3Q9ULD4 1205 aa21.23■□□□□ 0.99
MUC4-212ENST00000467235 IGF1RP08069 1367 aa21.21■□□□□ 0.99
MUC4-212ENST00000467235 NUP160Q12769 1436 aa21.2■□□□□ 0.98
MUC4-212ENST00000467235 NEFMP07197 916 aa21.2■□□□□ 0.98
MUC4-212ENST00000467235 CEP170Q5SW79 1584 aa21.17■□□□□ 0.98
MUC4-212ENST00000467235 RIMBP3CA6NJZ7 1639 aa21.17■□□□□ 0.98
MUC4-212ENST00000467235 RIMBP3BA6NNM3 1639 aa21.17■□□□□ 0.98
MUC4-212ENST00000467235 RIMBP3Q9UFD9 1639 aa21.17■□□□□ 0.98
MUC4-212ENST00000467235 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
MUC4-212ENST00000467235 ARHGEF11O15085 1522 aa21.15■□□□□ 0.98
MUC4-212ENST00000467235 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
MUC4-212ENST00000467235 ZMYND15Q9H091 742 aa21.15■□□□□ 0.98
MUC4-212ENST00000467235 MAPKBP1O60336 1514 aa21.14■□□□□ 0.97
MUC4-212ENST00000467235 PPM1GO15355 546 aaPredicted RBP21.11■□□□□ 0.97
MUC4-212ENST00000467235 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
MUC4-212ENST00000467235 RRBP1Q9P2E9 1410 aaKnown RBP21.09■□□□□ 0.97
MUC4-212ENST00000467235 KIF21BO75037 1637 aa21.08■□□□□ 0.97
MUC4-212ENST00000467235 SHROOM2Q13796 1616 aa21.08■□□□□ 0.97
MUC4-212ENST00000467235 GSE1Q14687 1217 aa21.07■□□□□ 0.96
MUC4-212ENST00000467235 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
MUC4-212ENST00000467235 FAM43AQ8N2R8 423 aa21.07■□□□□ 0.96
MUC4-212ENST00000467235 LAS1LQ9Y4W2 734 aaKnown RBP21.05■□□□□ 0.96
MUC4-212ENST00000467235 NCBP3Q53F19 620 aaKnown RBP21.02■□□□□ 0.96
MUC4-212ENST00000467235 RAPGEF2Q9Y4G8 1499 aa21.02■□□□□ 0.96
MUC4-212ENST00000467235 KIAA0586Q9BVV6 1533 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms