RNA–Protein interactions for RNA: ENST00000467235.1

MUC4-212, Transcript of mucin 4, cell surface associated, humanhuman

TSL 2

Gene MUC4, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-212ENST00000467235 NISCHQ9Y2I1 1504 aa30.37■■■□□ 2.45
MUC4-212ENST00000467235 CCDC180Q9P1Z9 1646 aa27.1■■□□□ 1.93
MUC4-212ENST00000467235 PELP1Q8IZL8 1130 aaKnown RBP26.99■■□□□ 1.91
MUC4-212ENST00000467235 HRCP23327 699 aa26.57■■□□□ 1.84
MUC4-212ENST00000467235 MYT1Q01538 1121 aa26.25■■□□□ 1.79
MUC4-212ENST00000467235 ABCC9O60706 1549 aa26.24■■□□□ 1.79
MUC4-212ENST00000467235 PPARGC1BQ86YN6 1023 aaKnown RBP25.77■■□□□ 1.72
MUC4-212ENST00000467235 SCAF1Q9H7N4 1312 aaKnown RBP25.5■■□□□ 1.67
MUC4-212ENST00000467235 PCGF6Q9BYE7 350 aa25.48■■□□□ 1.67
MUC4-212ENST00000467235 NACADO15069 1562 aa25.41■■□□□ 1.66
MUC4-212ENST00000467235 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
MUC4-212ENST00000467235 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
MUC4-212ENST00000467235 MYO15BQ96JP2 1530 aa25.33■■□□□ 1.65
MUC4-212ENST00000467235 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
MUC4-212ENST00000467235 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
MUC4-212ENST00000467235 TTBK1Q5TCY1 1321 aaPredicted RBP24.91■■□□□ 1.58
MUC4-212ENST00000467235 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
MUC4-212ENST00000467235 ZEB1P37275 1124 aaPredicted RBP24.77■■□□□ 1.56
MUC4-212ENST00000467235 ACIN1Q9UKV3 1341 aaKnown RBP24.7■■□□□ 1.54
MUC4-212ENST00000467235 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
MUC4-212ENST00000467235 BICRAQ9NZM4 1560 aa24.6■■□□□ 1.53
MUC4-212ENST00000467235 TRIM26Q12899 539 aaPredicted RBP24.6■■□□□ 1.53
MUC4-212ENST00000467235 SUPT5HO00267 1087 aaKnown RBP24.58■■□□□ 1.53
MUC4-212ENST00000467235 SCRIBQ14160 1630 aa24.58■■□□□ 1.53
MUC4-212ENST00000467235 NEUROD1Q13562 356 aa24.5■■□□□ 1.51
MUC4-212ENST00000467235 SHROOM4Q9ULL8 1493 aa24.49■■□□□ 1.51
MUC4-212ENST00000467235 GTF3C3Q9Y5Q9 886 aa24.46■■□□□ 1.51
MUC4-212ENST00000467235 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
MUC4-212ENST00000467235 CENPBP07199 599 aaPredicted RBP24.31■■□□□ 1.48
MUC4-212ENST00000467235 BCL11AQ9H165 835 aa24.21■■□□□ 1.47
MUC4-212ENST00000467235 PRKCSHP14314 528 aaPredicted RBP24.04■■□□□ 1.44
MUC4-212ENST00000467235 LOC105371045A0A1W2PR82 267 aa23.98■■□□□ 1.43
MUC4-212ENST00000467235 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
MUC4-212ENST00000467235 EIF4G1Q04637 1599 aaKnown RBP23.95■■□□□ 1.42
MUC4-212ENST00000467235 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
MUC4-212ENST00000467235 SLC24A1O60721 1099 aa23.89■■□□□ 1.42
MUC4-212ENST00000467235 CC2D2AQ9P2K1 1620 aa23.82■■□□□ 1.4
MUC4-212ENST00000467235 DIEXFQ68CQ4 756 aaKnown RBP23.8■■□□□ 1.4
MUC4-212ENST00000467235 ANP32EQ9BTT0 268 aa23.75■■□□□ 1.39
MUC4-212ENST00000467235 CECR2Q9BXF3 1484 aa23.62■■□□□ 1.37
MUC4-212ENST00000467235 SMARCA4P51532 1647 aa23.58■■□□□ 1.37
MUC4-212ENST00000467235 BAZ1AQ9NRL2 1556 aaPredicted RBP23.56■■□□□ 1.36
MUC4-212ENST00000467235 ERICH6Q7L0X2 663 aa23.47■■□□□ 1.35
MUC4-212ENST00000467235 SMARCA2P51531 1590 aa23.43■■□□□ 1.34
MUC4-212ENST00000467235 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
MUC4-212ENST00000467235 APLP2Q06481 763 aa23.42■■□□□ 1.34
MUC4-212ENST00000467235 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
MUC4-212ENST00000467235 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
MUC4-212ENST00000467235 NCAPD3P42695 1498 aa23.39■■□□□ 1.34
MUC4-212ENST00000467235 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
MUC4-212ENST00000467235 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
MUC4-212ENST00000467235 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
MUC4-212ENST00000467235 MROH2BQ7Z745 1585 aa23.36■■□□□ 1.33
MUC4-212ENST00000467235 HMGXB3Q12766 1538 aa23.35■■□□□ 1.33
MUC4-212ENST00000467235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
MUC4-212ENST00000467235 CLSPNQ9HAW4 1339 aa23.3■■□□□ 1.32
MUC4-212ENST00000467235 TSHZ2Q9NRE2 1034 aa23.26■■□□□ 1.31
MUC4-212ENST00000467235 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
MUC4-212ENST00000467235 ZNF316A6NFI3 1004 aaPredicted RBP23.19■■□□□ 1.3
MUC4-212ENST00000467235 SUPT16HQ9Y5B9 1047 aaKnown RBP23.14■■□□□ 1.29
MUC4-212ENST00000467235 WIZO95785 1651 aa23.12■■□□□ 1.29
MUC4-212ENST00000467235 RSF1Q96T23 1441 aaPredicted RBP23.1■■□□□ 1.29
MUC4-212ENST00000467235 MIER1Q8N108 512 aa23.06■■□□□ 1.28
MUC4-212ENST00000467235 TOP2AP11388 1531 aaKnown RBP22.94■■□□□ 1.26
MUC4-212ENST00000467235 LAMC3Q9Y6N6 1575 aa22.82■■□□□ 1.24
MUC4-212ENST00000467235 NESP48681 1621 aa22.72■■□□□ 1.23
MUC4-212ENST00000467235 CADPSQ9ULU8 1353 aa22.68■■□□□ 1.22
MUC4-212ENST00000467235 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
MUC4-212ENST00000467235 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
MUC4-212ENST00000467235 RBM19Q9Y4C8 960 aaKnown RBP22.62■■□□□ 1.21
MUC4-212ENST00000467235 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
MUC4-212ENST00000467235 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
MUC4-212ENST00000467235 CFTRP13569 1480 aa22.59■■□□□ 1.21
MUC4-212ENST00000467235 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
MUC4-212ENST00000467235 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
MUC4-212ENST00000467235 PRDM2Q13029 1718 aa22.56■■□□□ 1.2
MUC4-212ENST00000467235 ANO8Q9HCE9 1232 aaPredicted RBP22.54■■□□□ 1.2
MUC4-212ENST00000467235 THOC2Q8NI27 1593 aaKnown RBP22.49■■□□□ 1.19
MUC4-212ENST00000467235 EHMT2Q96KQ7 1210 aa22.49■■□□□ 1.19
MUC4-212ENST00000467235 CUX2O14529 1486 aa22.49■■□□□ 1.19
MUC4-212ENST00000467235 MSH5O43196 834 aa22.48■■□□□ 1.19
MUC4-212ENST00000467235 FANCD2Q9BXW9 1451 aa22.42■■□□□ 1.18
MUC4-212ENST00000467235 CEP164Q9UPV0 1460 aa22.42■■□□□ 1.18
MUC4-212ENST00000467235 WRNQ14191 1432 aaPredicted RBP eCLIP22.39■■□□□ 1.17
MUC4-212ENST00000467235 MRC2Q9UBG0 1479 aa22.38■■□□□ 1.17
MUC4-212ENST00000467235 BCANQ96GW7 911 aa22.38■■□□□ 1.17
MUC4-212ENST00000467235 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
MUC4-212ENST00000467235 DEKP35659 375 aaKnown RBP22.35■■□□□ 1.17
MUC4-212ENST00000467235 ERICH6BQ5W0A0 696 aa22.34■■□□□ 1.17
MUC4-212ENST00000467235 WDR62O43379 1518 aa22.33■■□□□ 1.17
MUC4-212ENST00000467235 UBE2Q2Q8WVN8 375 aa22.31■■□□□ 1.16
MUC4-212ENST00000467235 FKBP8Q14318 412 aa22.3■■□□□ 1.16
MUC4-212ENST00000467235 SALL2Q9Y467 1007 aaPredicted RBP22.24■■□□□ 1.15
MUC4-212ENST00000467235 URB2Q14146 1524 aaKnown RBP22.19■■□□□ 1.14
MUC4-212ENST00000467235 ABCC8Q09428 1581 aa22.15■■□□□ 1.14
MUC4-212ENST00000467235 NEFLP07196 543 aa22.15■■□□□ 1.14
MUC4-212ENST00000467235 DNMBPQ6XZF7 1577 aa22.11■■□□□ 1.13
MUC4-212ENST00000467235 EIF5BO60841 1220 aaKnown RBP22.11■■□□□ 1.13
MUC4-212ENST00000467235 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
MUC4-212ENST00000467235 CCDC136Q96JN2 1154 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms