RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 CCER2I3L3R5 266 aa22.19■■□□□ 1.14
CHD1L-205ENST00000467213 WDR97A6NE52 1622 aa22.16■■□□□ 1.14
CHD1L-205ENST00000467213 FHAD1B1AJZ9 1412 aa22.13■■□□□ 1.13
CHD1L-205ENST00000467213 PPP1R15AO75807 674 aaPredicted RBP22.13■■□□□ 1.13
CHD1L-205ENST00000467213 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
CHD1L-205ENST00000467213 IGF1RP08069 1367 aa22.07■■□□□ 1.12
CHD1L-205ENST00000467213 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.126e-7■■■■■ 27.9
CHD1L-205ENST00000467213 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
CHD1L-205ENST00000467213 EFCAB5A4FU69 1503 aa22.01■■□□□ 1.11
CHD1L-205ENST00000467213 KCNH8Q96L42 1107 aa22■■□□□ 1.11
CHD1L-205ENST00000467213 FYCO1Q9BQS8 1478 aa22■■□□□ 1.11
CHD1L-205ENST00000467213 NEFLP07196 543 aa21.99■■□□□ 1.11
CHD1L-205ENST00000467213 FKBP8Q14318 412 aa21.99■■□□□ 1.11
CHD1L-205ENST00000467213 PCF11O94913 1555 aaKnown RBP21.98■■□□□ 1.11
CHD1L-205ENST00000467213 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
CHD1L-205ENST00000467213 DDX10Q13206 875 aaKnown RBP21.94■■□□□ 1.1
CHD1L-205ENST00000467213 FGD5Q6ZNL6 1462 aa21.94■■□□□ 1.1
CHD1L-205ENST00000467213 ANP32CO43423 234 aa21.92■■□□□ 1.1
CHD1L-205ENST00000467213 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
CHD1L-205ENST00000467213 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
CHD1L-205ENST00000467213 ERICH6BQ5W0A0 696 aa21.88■■□□□ 1.09
CHD1L-205ENST00000467213 ITGAEP38570 1179 aa21.87■■□□□ 1.09
CHD1L-205ENST00000467213 CC2D2AQ9P2K1 1620 aa21.87■■□□□ 1.09
CHD1L-205ENST00000467213 SIN3AQ96ST3 1273 aa21.85■■□□□ 1.09
CHD1L-205ENST00000467213 UACAQ9BZF9 1416 aa21.85■■□□□ 1.09
CHD1L-205ENST00000467213 HFM1A2PYH4 1435 aa21.84■■□□□ 1.09
CHD1L-205ENST00000467213 CUL7Q14999 1698 aa21.84■■□□□ 1.09
CHD1L-205ENST00000467213 FANCIQ9NVI1 1328 aa21.83■■□□□ 1.09
CHD1L-205ENST00000467213 CTTNBP2Q8WZ74 1663 aa21.83■■□□□ 1.08
CHD1L-205ENST00000467213 BCL11AQ9H165 835 aa21.82■■□□□ 1.08
CHD1L-205ENST00000467213 FGD6Q6ZV73 1430 aa21.8■■□□□ 1.08
CHD1L-205ENST00000467213 PTPN23Q9H3S7 1636 aa21.8■■□□□ 1.08
CHD1L-205ENST00000467213 THOC2Q8NI27 1593 aaKnown RBP21.79■■□□□ 1.08
CHD1L-205ENST00000467213 CADPSQ9ULU8 1353 aa21.79■■□□□ 1.08
CHD1L-205ENST00000467213 CCDC18Q5T9S5 1454 aa21.78■■□□□ 1.08
CHD1L-205ENST00000467213 BCANQ96GW7 911 aa21.78■■□□□ 1.08
CHD1L-205ENST00000467213 KDM5BQ9UGL1 1544 aa21.77■■□□□ 1.08
CHD1L-205ENST00000467213 TONSLQ96HA7 1378 aa21.77■■□□□ 1.08
CHD1L-205ENST00000467213 FMN1Q68DA7 1419 aa21.76■■□□□ 1.07
CHD1L-205ENST00000467213 FAM50AQ14320 339 aaKnown RBP21.76■■□□□ 1.07
CHD1L-205ENST00000467213 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
CHD1L-205ENST00000467213 SNAPC4Q5SXM2 1469 aa21.72■■□□□ 1.07
CHD1L-205ENST00000467213 MYT1LQ9UL68 1186 aa21.7■■□□□ 1.07
CHD1L-205ENST00000467213 NCOA2Q15596 1464 aa21.7■■□□□ 1.06
CHD1L-205ENST00000467213 DNMBPQ6XZF7 1577 aa21.7■■□□□ 1.06
CHD1L-205ENST00000467213 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
CHD1L-205ENST00000467213 SAMD9Q5K651 1589 aa21.68■■□□□ 1.06
CHD1L-205ENST00000467213 HECW1Q76N89 1606 aa21.68■■□□□ 1.06
CHD1L-205ENST00000467213 AKNAQ7Z591 1439 aa21.67■■□□□ 1.06
CHD1L-205ENST00000467213 GCC2Q8IWJ2 1684 aa21.67■■□□□ 1.06
CHD1L-205ENST00000467213 NAIPQ13075 1403 aa21.67■■□□□ 1.06
CHD1L-205ENST00000467213 TRIM52Q96A61 297 aa21.67■■□□□ 1.06
CHD1L-205ENST00000467213 FHOD3Q2V2M9 1422 aa21.66■■□□□ 1.06
CHD1L-205ENST00000467213 SUPT6HQ7KZ85 1726 aaKnown RBP21.65■■□□□ 1.06
CHD1L-205ENST00000467213 ARHGEF11O15085 1522 aa21.64■■□□□ 1.05
CHD1L-205ENST00000467213 EHBP1L1Q8N3D4 1523 aa21.63■■□□□ 1.05
CHD1L-205ENST00000467213 MYOM3Q5VTT5 1437 aa21.63■■□□□ 1.05
CHD1L-205ENST00000467213 CDK11AQ9UQ88 783 aaPredicted RBP21.62■■□□□ 1.05
CHD1L-205ENST00000467213 LRRIQ1Q96JM4 1722 aa21.61■■□□□ 1.05
CHD1L-205ENST00000467213 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
CHD1L-205ENST00000467213 MSH5O43196 834 aa21.6■■□□□ 1.05
CHD1L-205ENST00000467213 TCOF1Q13428 1488 aaKnown RBP21.6■■□□□ 1.05
CHD1L-205ENST00000467213 POLR1AO95602 1720 aaPredicted RBP21.59■■□□□ 1.05
CHD1L-205ENST00000467213 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
CHD1L-205ENST00000467213 UGGT2Q9NYU1 1516 aa21.57■■□□□ 1.04
CHD1L-205ENST00000467213 ABCA5Q8WWZ7 1642 aa21.55■■□□□ 1.04
CHD1L-205ENST00000467213 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
CHD1L-205ENST00000467213 FANCD2Q9BXW9 1451 aa21.55■■□□□ 1.04
CHD1L-205ENST00000467213 PPP4R2Q9NY27 417 aa21.55■■□□□ 1.04
CHD1L-205ENST00000467213 MTUS2Q5JR59 1369 aa21.54■■□□□ 1.04
CHD1L-205ENST00000467213 POLA1P09884 1462 aaPredicted RBP21.52■■□□□ 1.04
CHD1L-205ENST00000467213 TOPBP1Q92547 1522 aa21.52■■□□□ 1.04
CHD1L-205ENST00000467213 HNRNPUQ00839 825 aaKnown RBP eCLIP21.51■■□□□ 1.03
CHD1L-205ENST00000467213 HIRIP3Q9BW71 556 aaPredicted RBP21.5■■□□□ 1.03
CHD1L-205ENST00000467213 WASHC2AQ641Q2 1341 aa21.49■■□□□ 1.03
CHD1L-205ENST00000467213 NCOA1Q15788 1441 aa21.48■■□□□ 1.03
CHD1L-205ENST00000467213 DENND4BO75064 1496 aaPredicted RBP21.47■■□□□ 1.03
CHD1L-205ENST00000467213 ZBED9Q6R2W3 1325 aa21.45■■□□□ 1.02
CHD1L-205ENST00000467213 MIA2Q96PC5 1412 aa21.43■■□□□ 1.02
CHD1L-205ENST00000467213 EIF4G2P78344 907 aaKnown RBP eCLIP21.43■■□□□ 1.02
CHD1L-205ENST00000467213 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
CHD1L-205ENST00000467213 HSPA5P11021 654 aaKnown RBP21.42■■□□□ 1.02
CHD1L-205ENST00000467213 P3H3Q8IVL6 736 aa21.42■■□□□ 1.02
CHD1L-205ENST00000467213 ERICH6Q7L0X2 663 aa21.4■■□□□ 1.02
CHD1L-205ENST00000467213 CCDC7Q96M83 1385 aa21.39■■□□□ 1.01
CHD1L-205ENST00000467213 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
CHD1L-205ENST00000467213 PRKRIP1Q9H875 184 aaPredicted RBP21.36■■□□□ 1.01
CHD1L-205ENST00000467213 SPATA31E1Q6ZUB1 1445 aa21.34■■□□□ 1.01
CHD1L-205ENST00000467213 RPRD2Q5VT52 1461 aaKnown RBP21.34■■□□□ 1.01
CHD1L-205ENST00000467213 MAGI3Q5TCQ9 1506 aa21.34■■□□□ 1.01
CHD1L-205ENST00000467213 ROCK1Q13464 1354 aa21.34■■□□□ 1.01
CHD1L-205ENST00000467213 SMG6Q86US8 1419 aaKnown RBP21.32■■□□□ 1
CHD1L-205ENST00000467213 TEX14Q8IWB6 1497 aa21.31■■□□□ 1
CHD1L-205ENST00000467213 RNF123Q5XPI4 1314 aa21.3■■□□□ 1
CHD1L-205ENST00000467213 KDM6BO15054 1643 aa21.29■■□□□ 1
CHD1L-205ENST00000467213 LAMC3Q9Y6N6 1575 aa21.29■■□□□ 1
CHD1L-205ENST00000467213 ANKRD30BQ9BXX2 1392 aa21.26■□□□□ 0.99
CHD1L-205ENST00000467213 NESP48681 1621 aa21.26■□□□□ 0.99
CHD1L-205ENST00000467213 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
CHD1L-205ENST00000467213 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms