RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
PLOD3-211ENST00000466881 WDR62O43379 1518 aa19.81■□□□□ 0.76
PLOD3-211ENST00000466881 BIVM-ERCC5R4GMW8 1640 aa19.8■□□□□ 0.76
PLOD3-211ENST00000466881 FKBP8Q14318 412 aa19.74■□□□□ 0.75
PLOD3-211ENST00000466881 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
PLOD3-211ENST00000466881 SOGA1O94964 1423 aa19.71■□□□□ 0.75
PLOD3-211ENST00000466881 LOC105371045A0A1W2PR82 267 aa19.69■□□□□ 0.74
PLOD3-211ENST00000466881 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
PLOD3-211ENST00000466881 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
PLOD3-211ENST00000466881 FBLN2P98095 1184 aa19.66■□□□□ 0.74
PLOD3-211ENST00000466881 EEA1Q15075 1411 aa19.65■□□□□ 0.74
PLOD3-211ENST00000466881 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
PLOD3-211ENST00000466881 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
PLOD3-211ENST00000466881 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
PLOD3-211ENST00000466881 ZBTB12Q9Y330 459 aaPredicted RBP19.6■□□□□ 0.73
PLOD3-211ENST00000466881 RIMBP3CA6NJZ7 1639 aa19.59■□□□□ 0.73
PLOD3-211ENST00000466881 RIMBP3BA6NNM3 1639 aa19.59■□□□□ 0.73
PLOD3-211ENST00000466881 RIMBP3Q9UFD9 1639 aa19.59■□□□□ 0.73
PLOD3-211ENST00000466881 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
PLOD3-211ENST00000466881 KIF27Q86VH2 1401 aa19.53■□□□□ 0.72
PLOD3-211ENST00000466881 RAD54L2Q9Y4B4 1467 aa19.52■□□□□ 0.72
PLOD3-211ENST00000466881 ARHGEF11O15085 1522 aa19.45■□□□□ 0.7
PLOD3-211ENST00000466881 SPDYE4A6NLX3 237 aa19.44■□□□□ 0.7
PLOD3-211ENST00000466881 ABCA10Q8WWZ4 1543 aa19.43■□□□□ 0.7
PLOD3-211ENST00000466881 UBTFP17480 764 aaKnown RBP19.42■□□□□ 0.7
PLOD3-211ENST00000466881 GOLGA3Q08378 1498 aa19.38■□□□□ 0.69
PLOD3-211ENST00000466881 KIF21BO75037 1637 aa19.37■□□□□ 0.69
PLOD3-211ENST00000466881 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
PLOD3-211ENST00000466881 WDR97A6NE52 1622 aa19.35■□□□□ 0.69
PLOD3-211ENST00000466881 TARBP1Q13395 1621 aaKnown RBP19.35■□□□□ 0.69
PLOD3-211ENST00000466881 IGF1RP08069 1367 aa19.34■□□□□ 0.69
PLOD3-211ENST00000466881 IFT140Q96RY7 1462 aa19.34■□□□□ 0.69
PLOD3-211ENST00000466881 GAPVD1Q14C86 1478 aa19.3■□□□□ 0.68
PLOD3-211ENST00000466881 PRXQ9BXM0 1461 aa19.3■□□□□ 0.68
PLOD3-211ENST00000466881 RAPGEF2Q9Y4G8 1499 aa19.3■□□□□ 0.68
PLOD3-211ENST00000466881 CYB5RLQ6IPT4 315 aa19.3■□□□□ 0.68
PLOD3-211ENST00000466881 TNIKQ9UKE5 1360 aa19.29■□□□□ 0.68
PLOD3-211ENST00000466881 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
PLOD3-211ENST00000466881 ZNF608Q9ULD9 1512 aaPredicted RBP19.27■□□□□ 0.68
PLOD3-211ENST00000466881 ABCA5Q8WWZ7 1642 aa19.27■□□□□ 0.68
PLOD3-211ENST00000466881 PROM2Q8N271 834 aa19.27■□□□□ 0.68
PLOD3-211ENST00000466881 ERICH3Q5RHP9 1530 aa19.26■□□□□ 0.67
PLOD3-211ENST00000466881 AQRO60306 1485 aaKnown RBP eCLIP19.25■□□□□ 0.672e-7■■■■□ 26.3
PLOD3-211ENST00000466881 CUL7Q14999 1698 aa19.2■□□□□ 0.66
PLOD3-211ENST00000466881 ARAP1Q96P48 1450 aa19.2■□□□□ 0.66
PLOD3-211ENST00000466881 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
PLOD3-211ENST00000466881 RANGAP1P46060 587 aaPredicted RBP19.19■□□□□ 0.66
PLOD3-211ENST00000466881 PBRM1Q86U86 1689 aa19.18■□□□□ 0.66
PLOD3-211ENST00000466881 CHD1O14646 1710 aa19.18■□□□□ 0.66
PLOD3-211ENST00000466881 CEP162Q5TB80 1403 aa19.17■□□□□ 0.66
PLOD3-211ENST00000466881 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
PLOD3-211ENST00000466881 SPDYE2BA6NHP3 402 aa19.17■□□□□ 0.66
PLOD3-211ENST00000466881 SPDYE6P0CI01 402 aa19.17■□□□□ 0.66
PLOD3-211ENST00000466881 SPDYE2Q495Y8 402 aa19.17■□□□□ 0.66
PLOD3-211ENST00000466881 SSUH2Q9Y2M2 353 aa19.15■□□□□ 0.66
PLOD3-211ENST00000466881 ZNF692Q9BU19 519 aaPredicted RBP19.13■□□□□ 0.65
PLOD3-211ENST00000466881 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.65
PLOD3-211ENST00000466881 CLIP1P30622 1438 aa19.08■□□□□ 0.65
PLOD3-211ENST00000466881 SNAPC4Q5SXM2 1469 aa19.06■□□□□ 0.64
PLOD3-211ENST00000466881 ADAMTS12P58397 1594 aa19.05■□□□□ 0.64
PLOD3-211ENST00000466881 CHMP7Q8WUX9 453 aaPredicted RBP19■□□□□ 0.63
PLOD3-211ENST00000466881 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
PLOD3-211ENST00000466881 CTTNBP2Q8WZ74 1663 aa18.97■□□□□ 0.63
PLOD3-211ENST00000466881 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
PLOD3-211ENST00000466881 GRIN2AQ12879 1464 aa18.92■□□□□ 0.62
PLOD3-211ENST00000466881 CLASP1Q7Z460 1538 aa18.9■□□□□ 0.62
PLOD3-211ENST00000466881 P3H3Q8IVL6 736 aa18.89■□□□□ 0.61
PLOD3-211ENST00000466881 ARHGAP35Q9NRY4 1499 aa18.89■□□□□ 0.61
PLOD3-211ENST00000466881 RBM42Q9BTD8 480 aaKnown RBP18.88■□□□□ 0.61
PLOD3-211ENST00000466881 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
PLOD3-211ENST00000466881 PPARGC1BQ86YN6 1023 aaKnown RBP18.84■□□□□ 0.61
PLOD3-211ENST00000466881 FBXO3Q9UK99 471 aa18.83■□□□□ 0.6
PLOD3-211ENST00000466881 IQGAP2Q13576 1575 aa18.83■□□□□ 0.6
PLOD3-211ENST00000466881 EFCAB5A4FU69 1503 aa18.82■□□□□ 0.6
PLOD3-211ENST00000466881 KIAA0586Q9BVV6 1533 aa18.81■□□□□ 0.6
PLOD3-211ENST00000466881 CEP170Q5SW79 1584 aa18.79■□□□□ 0.6
PLOD3-211ENST00000466881 FHOD3Q2V2M9 1422 aa18.77■□□□□ 0.6
PLOD3-211ENST00000466881 AKT1S1Q96B36 256 aa18.77■□□□□ 0.6
PLOD3-211ENST00000466881 TTBK1Q5TCY1 1321 aaPredicted RBP18.75■□□□□ 0.59
PLOD3-211ENST00000466881 NUP160Q12769 1436 aa18.75■□□□□ 0.59
PLOD3-211ENST00000466881 ATP1B4Q9UN42 357 aaPredicted RBP18.74■□□□□ 0.59
PLOD3-211ENST00000466881 SAMD9Q5K651 1589 aa18.73■□□□□ 0.59
PLOD3-211ENST00000466881 UGGT2Q9NYU1 1516 aa18.72■□□□□ 0.59
PLOD3-211ENST00000466881 VASPP50552 380 aaPredicted RBP18.7■□□□□ 0.58
PLOD3-211ENST00000466881 JPH4Q96JJ6 628 aa18.7■□□□□ 0.58
PLOD3-211ENST00000466881 TRIM26Q12899 539 aaPredicted RBP18.69■□□□□ 0.58
PLOD3-211ENST00000466881 FMN1Q68DA7 1419 aa18.68■□□□□ 0.58
PLOD3-211ENST00000466881 PCGF6Q9BYE7 350 aa18.67■□□□□ 0.58
PLOD3-211ENST00000466881 CARMIL2Q6F5E8 1435 aa18.65■□□□□ 0.58
PLOD3-211ENST00000466881 REM2Q8IYK8 340 aaPredicted RBP18.64■□□□□ 0.57
PLOD3-211ENST00000466881 PCF11O94913 1555 aaKnown RBP18.63■□□□□ 0.57
PLOD3-211ENST00000466881 KIAA0556O60303 1618 aa18.63■□□□□ 0.57
PLOD3-211ENST00000466881 DISP1Q96F81 1524 aa18.62■□□□□ 0.57
PLOD3-211ENST00000466881 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
PLOD3-211ENST00000466881 FYCO1Q9BQS8 1478 aa18.59■□□□□ 0.57
PLOD3-211ENST00000466881 PRG4Q92954 1404 aaPredicted RBP18.57■□□□□ 0.56
PLOD3-211ENST00000466881 KANK4Q5T7N3 995 aaPredicted RBP18.56■□□□□ 0.56
PLOD3-211ENST00000466881 STAG3Q9UJ98 1225 aa18.56■□□□□ 0.56
PLOD3-211ENST00000466881 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
PLOD3-211ENST00000466881 KIF13AQ9H1H9 1805 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms