RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
C9orf135-202ENST00000466872 ZNF608Q9ULD9 1512 aaPredicted RBP17.19■□□□□ 0.34
C9orf135-202ENST00000466872 WDR97A6NE52 1622 aa17.17■□□□□ 0.34
C9orf135-202ENST00000466872 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
C9orf135-202ENST00000466872 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
C9orf135-202ENST00000466872 BIVM-ERCC5R4GMW8 1640 aa17.15■□□□□ 0.34
C9orf135-202ENST00000466872 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
C9orf135-202ENST00000466872 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
C9orf135-202ENST00000466872 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
C9orf135-202ENST00000466872 DNAJC5Q9H3Z4 198 aa17.09■□□□□ 0.33
C9orf135-202ENST00000466872 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
C9orf135-202ENST00000466872 SOGA1O94964 1423 aa17.06■□□□□ 0.32
C9orf135-202ENST00000466872 WRNQ14191 1432 aaPredicted RBP eCLIP17.06■□□□□ 0.32
C9orf135-202ENST00000466872 AQRO60306 1485 aaKnown RBP eCLIP17.04■□□□□ 0.32
C9orf135-202ENST00000466872 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
C9orf135-202ENST00000466872 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
C9orf135-202ENST00000466872 PBRM1Q86U86 1689 aa16.97■□□□□ 0.31
C9orf135-202ENST00000466872 MKRN4PQ13434 485 aaPredicted RBP16.97■□□□□ 0.31
C9orf135-202ENST00000466872 TDRD9Q8NDG6 1382 aaKnown RBP16.97■□□□□ 0.31
C9orf135-202ENST00000466872 CHD1O14646 1710 aa16.96■□□□□ 0.3
C9orf135-202ENST00000466872 FBLN2P98095 1184 aa16.94■□□□□ 0.3
C9orf135-202ENST00000466872 GRIN2BQ13224 1484 aa16.9■□□□□ 0.3
C9orf135-202ENST00000466872 GAPVD1Q14C86 1478 aa16.9■□□□□ 0.3
C9orf135-202ENST00000466872 SNAPC4Q5SXM2 1469 aa16.9■□□□□ 0.3
C9orf135-202ENST00000466872 MAGI1Q96QZ7 1491 aaPredicted RBP16.88■□□□□ 0.29
C9orf135-202ENST00000466872 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
C9orf135-202ENST00000466872 SYNJ2O15056 1496 aa16.81■□□□□ 0.28
C9orf135-202ENST00000466872 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
C9orf135-202ENST00000466872 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
C9orf135-202ENST00000466872 CLASP1Q7Z460 1538 aa16.79■□□□□ 0.28
C9orf135-202ENST00000466872 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
C9orf135-202ENST00000466872 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
C9orf135-202ENST00000466872 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
C9orf135-202ENST00000466872 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
C9orf135-202ENST00000466872 GRIN2AQ12879 1464 aa16.72■□□□□ 0.27
C9orf135-202ENST00000466872 FHAD1B1AJZ9 1412 aa16.7■□□□□ 0.26
C9orf135-202ENST00000466872 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
C9orf135-202ENST00000466872 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
C9orf135-202ENST00000466872 NUP160Q12769 1436 aa16.68■□□□□ 0.26
C9orf135-202ENST00000466872 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
C9orf135-202ENST00000466872 CUL7Q14999 1698 aa16.66■□□□□ 0.26
C9orf135-202ENST00000466872 IGF1RP08069 1367 aa16.65■□□□□ 0.26
C9orf135-202ENST00000466872 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
C9orf135-202ENST00000466872 SPDYE2BA6NHP3 402 aa16.63■□□□□ 0.25
C9orf135-202ENST00000466872 SPDYE6P0CI01 402 aa16.63■□□□□ 0.25
C9orf135-202ENST00000466872 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
C9orf135-202ENST00000466872 RUSC2Q8N2Y8 1516 aa16.62■□□□□ 0.25
C9orf135-202ENST00000466872 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
C9orf135-202ENST00000466872 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
C9orf135-202ENST00000466872 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
C9orf135-202ENST00000466872 AKT1S1Q96B36 256 aa16.52■□□□□ 0.24
C9orf135-202ENST00000466872 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
C9orf135-202ENST00000466872 SSUH2Q9Y2M2 353 aa16.51■□□□□ 0.23
C9orf135-202ENST00000466872 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
C9orf135-202ENST00000466872 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
C9orf135-202ENST00000466872 SPDYE4A6NLX3 237 aa16.47■□□□□ 0.23
C9orf135-202ENST00000466872 KIAA0586Q9BVV6 1533 aa16.46■□□□□ 0.23
C9orf135-202ENST00000466872 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
C9orf135-202ENST00000466872 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
C9orf135-202ENST00000466872 CTTNBP2Q8WZ74 1663 aa16.39■□□□□ 0.21
C9orf135-202ENST00000466872 IQGAP2Q13576 1575 aa16.38■□□□□ 0.21
C9orf135-202ENST00000466872 PRG4Q92954 1404 aaPredicted RBP16.38■□□□□ 0.21
C9orf135-202ENST00000466872 CYB5RLQ6IPT4 315 aa16.36■□□□□ 0.21
C9orf135-202ENST00000466872 REM2Q8IYK8 340 aaPredicted RBP16.36■□□□□ 0.21
C9orf135-202ENST00000466872 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
C9orf135-202ENST00000466872 EEA1Q15075 1411 aa16.36■□□□□ 0.21
C9orf135-202ENST00000466872 FKBP8Q14318 412 aa16.34■□□□□ 0.21
C9orf135-202ENST00000466872 UGGT2Q9NYU1 1516 aa16.33■□□□□ 0.2
C9orf135-202ENST00000466872 DISP1Q96F81 1524 aa16.31■□□□□ 0.2
C9orf135-202ENST00000466872 KIF21BO75037 1637 aa16.29■□□□□ 0.2
C9orf135-202ENST00000466872 KIAA0556O60303 1618 aa16.27■□□□□ 0.2
C9orf135-202ENST00000466872 PROM2Q8N271 834 aa16.26■□□□□ 0.19
C9orf135-202ENST00000466872 ADCY10Q96PN6 1610 aa16.26■□□□□ 0.19
C9orf135-202ENST00000466872 SAMD9Q5K651 1589 aa16.2■□□□□ 0.18
C9orf135-202ENST00000466872 CARMIL2Q6F5E8 1435 aa16.19■□□□□ 0.18
C9orf135-202ENST00000466872 TNIKQ9UKE5 1360 aa16.18■□□□□ 0.18
C9orf135-202ENST00000466872 PITPNM1O00562 1244 aa16.17■□□□□ 0.18
C9orf135-202ENST00000466872 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
C9orf135-202ENST00000466872 FAM9AQ8IZU1 332 aaPredicted RBP16.15■□□□□ 0.18
C9orf135-202ENST00000466872 PTPRGP23470 1445 aa16.14■□□□□ 0.17
C9orf135-202ENST00000466872 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
C9orf135-202ENST00000466872 KIF13AQ9H1H9 1805 aa16.14■□□□□ 0.17
C9orf135-202ENST00000466872 MAPKBP1O60336 1514 aa16.14■□□□□ 0.17
C9orf135-202ENST00000466872 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
C9orf135-202ENST00000466872 ABCC2Q92887 1545 aa16.12■□□□□ 0.17
C9orf135-202ENST00000466872 ABCA8O94911 1581 aa16.11■□□□□ 0.17
C9orf135-202ENST00000466872 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
C9orf135-202ENST00000466872 UACAQ9BZF9 1416 aa16.09■□□□□ 0.17
C9orf135-202ENST00000466872 KDM5BQ9UGL1 1544 aa16.07■□□□□ 0.16
C9orf135-202ENST00000466872 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
C9orf135-202ENST00000466872 PLB1Q6P1J6 1458 aa16.06■□□□□ 0.16
C9orf135-202ENST00000466872 CLEC11AQ9Y240 323 aa16.06■□□□□ 0.16
C9orf135-202ENST00000466872 ZCCHC11Q5TAX3 1644 aaKnown RBP16.05■□□□□ 0.16
C9orf135-202ENST00000466872 EFCAB5A4FU69 1503 aa16.04■□□□□ 0.16
C9orf135-202ENST00000466872 ABCC10Q5T3U5 1492 aa16.02■□□□□ 0.15
C9orf135-202ENST00000466872 STAG3Q9UJ98 1225 aa16.01■□□□□ 0.15
C9orf135-202ENST00000466872 FHOD3Q2V2M9 1422 aa15.99■□□□□ 0.15
C9orf135-202ENST00000466872 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
C9orf135-202ENST00000466872 RAPGEF6Q8TEU7 1601 aa15.97■□□□□ 0.15
C9orf135-202ENST00000466872 TTBK1Q5TCY1 1321 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms