RNA–Protein interactions for RNA: ENST00000460838.5

CCDC66-210, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-210ENST00000460838 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
CCDC66-210ENST00000460838 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
CCDC66-210ENST00000460838 IFT140Q96RY7 1462 aa16.45■□□□□ 0.22
CCDC66-210ENST00000460838 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
CCDC66-210ENST00000460838 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
CCDC66-210ENST00000460838 SOGA1O94964 1423 aa16.38■□□□□ 0.21
CCDC66-210ENST00000460838 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
CCDC66-210ENST00000460838 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
CCDC66-210ENST00000460838 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
CCDC66-210ENST00000460838 AQRO60306 1485 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCDC66-210ENST00000460838 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
CCDC66-210ENST00000460838 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.2
CCDC66-210ENST00000460838 ABCB7O75027 752 aa16.25■□□□□ 0.19
CCDC66-210ENST00000460838 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
CCDC66-210ENST00000460838 DSG3P32926 999 aa16.2■□□□□ 0.18
CCDC66-210ENST00000460838 POLA2Q14181 598 aa16.2■□□□□ 0.18
CCDC66-210ENST00000460838 PBRM1Q86U86 1689 aa16.2■□□□□ 0.18
CCDC66-210ENST00000460838 GRIN2BQ13224 1484 aa16.19■□□□□ 0.18
CCDC66-210ENST00000460838 SNAPC4Q5SXM2 1469 aa16.16■□□□□ 0.18
CCDC66-210ENST00000460838 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
CCDC66-210ENST00000460838 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
CCDC66-210ENST00000460838 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
CCDC66-210ENST00000460838 KIF27Q86VH2 1401 aa16.11■□□□□ 0.17
CCDC66-210ENST00000460838 CHD1O14646 1710 aa16.1■□□□□ 0.17
CCDC66-210ENST00000460838 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
CCDC66-210ENST00000460838 SYNJ2O15056 1496 aa16.08■□□□□ 0.16
CCDC66-210ENST00000460838 RUSC2Q8N2Y8 1516 aa16.07■□□□□ 0.16
CCDC66-210ENST00000460838 IGF1RP08069 1367 aa16.05■□□□□ 0.16
CCDC66-210ENST00000460838 FHAD1B1AJZ9 1412 aa16.03■□□□□ 0.16
CCDC66-210ENST00000460838 CUL7Q14999 1698 aa16.01■□□□□ 0.15
CCDC66-210ENST00000460838 GRIN2AQ12879 1464 aa16■□□□□ 0.15
CCDC66-210ENST00000460838 FBLN2P98095 1184 aa16■□□□□ 0.15
CCDC66-210ENST00000460838 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
CCDC66-210ENST00000460838 CHMP7Q8WUX9 453 aaPredicted RBP15.99■□□□□ 0.15
CCDC66-210ENST00000460838 DNAJC5Q9H3Z4 198 aa15.99■□□□□ 0.15
CCDC66-210ENST00000460838 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.15
CCDC66-210ENST00000460838 CLASP1Q7Z460 1538 aa15.94■□□□□ 0.14
CCDC66-210ENST00000460838 CEP170Q5SW79 1584 aa15.94■□□□□ 0.14
CCDC66-210ENST00000460838 NUP160Q12769 1436 aa15.94■□□□□ 0.14
CCDC66-210ENST00000460838 CARMIL1Q5VZK9 1371 aa15.93■□□□□ 0.14
CCDC66-210ENST00000460838 EEA1Q15075 1411 aa15.91■□□□□ 0.14
CCDC66-210ENST00000460838 PRXQ9BXM0 1461 aa15.89■□□□□ 0.13
CCDC66-210ENST00000460838 RAPGEF2Q9Y4G8 1499 aa15.87■□□□□ 0.13
CCDC66-210ENST00000460838 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
CCDC66-210ENST00000460838 SHROOM2Q13796 1616 aa15.82■□□□□ 0.12
CCDC66-210ENST00000460838 ARHGEF11O15085 1522 aa15.81■□□□□ 0.12
CCDC66-210ENST00000460838 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
CCDC66-210ENST00000460838 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
CCDC66-210ENST00000460838 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
CCDC66-210ENST00000460838 KIAA0586Q9BVV6 1533 aa15.79■□□□□ 0.12
CCDC66-210ENST00000460838 KIF21BO75037 1637 aa15.78■□□□□ 0.12
CCDC66-210ENST00000460838 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
CCDC66-210ENST00000460838 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
CCDC66-210ENST00000460838 ERCC6L2Q5T890 1561 aa15.75■□□□□ 0.11
CCDC66-210ENST00000460838 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
CCDC66-210ENST00000460838 PRG4Q92954 1404 aaPredicted RBP15.7■□□□□ 0.1
CCDC66-210ENST00000460838 JPH4Q96JJ6 628 aa15.7■□□□□ 0.1
CCDC66-210ENST00000460838 ARAP1Q96P48 1450 aa15.7■□□□□ 0.1
CCDC66-210ENST00000460838 UGGT2Q9NYU1 1516 aa15.68■□□□□ 0.1
CCDC66-210ENST00000460838 GOLGA3Q08378 1498 aa15.66■□□□□ 0.1
CCDC66-210ENST00000460838 DISP1Q96F81 1524 aa15.64■□□□□ 0.09
CCDC66-210ENST00000460838 KIAA0556O60303 1618 aa15.61■□□□□ 0.09
CCDC66-210ENST00000460838 CYB5RLQ6IPT4 315 aa15.59■□□□□ 0.09
CCDC66-210ENST00000460838 CARMIL2Q6F5E8 1435 aa15.59■□□□□ 0.09
CCDC66-210ENST00000460838 SAMD9Q5K651 1589 aa15.57■□□□□ 0.08
CCDC66-210ENST00000460838 UBTFP17480 764 aaKnown RBP15.55■□□□□ 0.08
CCDC66-210ENST00000460838 TNIKQ9UKE5 1360 aa15.54■□□□□ 0.08
CCDC66-210ENST00000460838 FKBP8Q14318 412 aa15.53■□□□□ 0.08
CCDC66-210ENST00000460838 RBM42Q9BTD8 480 aaKnown RBP15.52■□□□□ 0.08
CCDC66-210ENST00000460838 PTPRGP23470 1445 aa15.51■□□□□ 0.07
CCDC66-210ENST00000460838 EFCAB5A4FU69 1503 aa15.5■□□□□ 0.07
CCDC66-210ENST00000460838 SPDYE4A6NLX3 237 aa15.5■□□□□ 0.07
CCDC66-210ENST00000460838 SPDYE2BA6NHP3 402 aa15.49■□□□□ 0.07
CCDC66-210ENST00000460838 SPDYE6P0CI01 402 aa15.49■□□□□ 0.07
CCDC66-210ENST00000460838 SPDYE2Q495Y8 402 aa15.49■□□□□ 0.07
CCDC66-210ENST00000460838 ADCY10Q96PN6 1610 aa15.48■□□□□ 0.07
CCDC66-210ENST00000460838 ZNF692Q9BU19 519 aaPredicted RBP15.48■□□□□ 0.07
CCDC66-210ENST00000460838 RANGAP1P46060 587 aaPredicted RBP15.47■□□□□ 0.07
CCDC66-210ENST00000460838 ARHGAP35Q9NRY4 1499 aa15.46■□□□□ 0.06
CCDC66-210ENST00000460838 FHOD3Q2V2M9 1422 aa15.45■□□□□ 0.06
CCDC66-210ENST00000460838 P3H3Q8IVL6 736 aa15.45■□□□□ 0.06
CCDC66-210ENST00000460838 TTBK1Q5TCY1 1321 aaPredicted RBP15.44■□□□□ 0.06
CCDC66-210ENST00000460838 LOC105371045A0A1W2PR82 267 aa15.43■□□□□ 0.06
CCDC66-210ENST00000460838 UHRF1BP1LA0JNW5 1464 aa15.43■□□□□ 0.06
CCDC66-210ENST00000460838 PLB1Q6P1J6 1458 aa15.43■□□□□ 0.06
CCDC66-210ENST00000460838 ABCA8O94911 1581 aa15.43■□□□□ 0.06
CCDC66-210ENST00000460838 ABCC2Q92887 1545 aa15.43■□□□□ 0.06
CCDC66-210ENST00000460838 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
CCDC66-210ENST00000460838 CLIP1P30622 1438 aa15.39■□□□□ 0.05
CCDC66-210ENST00000460838 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
CCDC66-210ENST00000460838 KDM5BQ9UGL1 1544 aa15.36■□□□□ 0.05
CCDC66-210ENST00000460838 RAPGEF6Q8TEU7 1601 aa15.35■□□□□ 0.05
CCDC66-210ENST00000460838 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
CCDC66-210ENST00000460838 ZCCHC11Q5TAX3 1644 aaKnown RBP15.33■□□□□ 0.04
CCDC66-210ENST00000460838 NUP153P49790 1475 aaKnown RBP15.33■□□□□ 0.04
CCDC66-210ENST00000460838 FMN1Q68DA7 1419 aa15.32■□□□□ 0.04
CCDC66-210ENST00000460838 AKT1S1Q96B36 256 aa15.3■□□□□ 0.04
CCDC66-210ENST00000460838 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
CCDC66-210ENST00000460838 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC66-210ENST00000460838 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms