RNA–Protein interactions for RNA: ENST00000460838.5

CCDC66-210, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 744 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-210ENST00000460838 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
CCDC66-210ENST00000460838 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
CCDC66-210ENST00000460838 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
CCDC66-210ENST00000460838 SENP3Q9H4L4 574 aaPredicted RBP23.27■■□□□ 1.32
CCDC66-210ENST00000460838 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
CCDC66-210ENST00000460838 PLPPR3Q6T4P5 718 aa21.75■■□□□ 1.07
CCDC66-210ENST00000460838 FOXD1Q16676 465 aa21.54■■□□□ 1.04
CCDC66-210ENST00000460838 ADRA2BP18089 450 aa20.75■□□□□ 0.91
CCDC66-210ENST00000460838 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
CCDC66-210ENST00000460838 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
CCDC66-210ENST00000460838 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
CCDC66-210ENST00000460838 MSH5O43196 834 aa19.93■□□□□ 0.78
CCDC66-210ENST00000460838 ABCC9O60706 1549 aa19.69■□□□□ 0.74
CCDC66-210ENST00000460838 PPP4R3CPQ6ZMV5 832 aa19.16■□□□□ 0.66
CCDC66-210ENST00000460838 ZCCHC6Q5VYS8 1495 aaKnown RBP19.15■□□□□ 0.66
CCDC66-210ENST00000460838 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
CCDC66-210ENST00000460838 NACADO15069 1562 aa19.03■□□□□ 0.64
CCDC66-210ENST00000460838 RB1CC1Q8TDY2 1594 aa19.01■□□□□ 0.63
CCDC66-210ENST00000460838 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
CCDC66-210ENST00000460838 DCAF1Q9Y4B6 1507 aa18.97■□□□□ 0.63
CCDC66-210ENST00000460838 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
CCDC66-210ENST00000460838 MAPK8IP2Q13387 824 aaPredicted RBP18.81■□□□□ 0.6
CCDC66-210ENST00000460838 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
CCDC66-210ENST00000460838 KCNA4P22459 653 aa18.7■□□□□ 0.58
CCDC66-210ENST00000460838 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
CCDC66-210ENST00000460838 UNC13AQ9UPW8 1703 aa18.62■□□□□ 0.57
CCDC66-210ENST00000460838 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
CCDC66-210ENST00000460838 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
CCDC66-210ENST00000460838 BICRAQ9NZM4 1560 aa18.48■□□□□ 0.55
CCDC66-210ENST00000460838 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
CCDC66-210ENST00000460838 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
CCDC66-210ENST00000460838 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
CCDC66-210ENST00000460838 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
CCDC66-210ENST00000460838 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
CCDC66-210ENST00000460838 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
CCDC66-210ENST00000460838 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
CCDC66-210ENST00000460838 DNAJC5BQ9UF47 199 aa17.94■□□□□ 0.46
CCDC66-210ENST00000460838 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
CCDC66-210ENST00000460838 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
CCDC66-210ENST00000460838 CECR2Q9BXF3 1484 aa17.84■□□□□ 0.45
CCDC66-210ENST00000460838 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.44
CCDC66-210ENST00000460838 SMARCA4P51532 1647 aa17.75■□□□□ 0.43
CCDC66-210ENST00000460838 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
CCDC66-210ENST00000460838 MROH2BQ7Z745 1585 aa17.67■□□□□ 0.42
CCDC66-210ENST00000460838 ATAD2BQ9ULI0 1458 aa17.6■□□□□ 0.41
CCDC66-210ENST00000460838 PEG3Q9GZU2 1588 aa17.6■□□□□ 0.41
CCDC66-210ENST00000460838 SMARCA2P51531 1590 aa17.57■□□□□ 0.4
CCDC66-210ENST00000460838 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
CCDC66-210ENST00000460838 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
CCDC66-210ENST00000460838 HMGXB3Q12766 1538 aa17.51■□□□□ 0.39
CCDC66-210ENST00000460838 WIZO95785 1651 aa17.48■□□□□ 0.39
CCDC66-210ENST00000460838 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
CCDC66-210ENST00000460838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.42■□□□□ 0.38
CCDC66-210ENST00000460838 EHMT2Q96KQ7 1210 aa17.39■□□□□ 0.37
CCDC66-210ENST00000460838 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
CCDC66-210ENST00000460838 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
CCDC66-210ENST00000460838 FOXD4L1Q9NU39 408 aa17.23■□□□□ 0.35
CCDC66-210ENST00000460838 ZBTB22O15209 634 aa17.13■□□□□ 0.33
CCDC66-210ENST00000460838 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
CCDC66-210ENST00000460838 NESP48681 1621 aa17.11■□□□□ 0.33
CCDC66-210ENST00000460838 CCDC88BA6NC98 1476 aa17.09■□□□□ 0.33
CCDC66-210ENST00000460838 CSRNP3Q8WYN3 585 aa17.07■□□□□ 0.32
CCDC66-210ENST00000460838 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
CCDC66-210ENST00000460838 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
CCDC66-210ENST00000460838 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
CCDC66-210ENST00000460838 U3KPZ7 1027 aaPredicted RBP17.01■□□□□ 0.31
CCDC66-210ENST00000460838 CFTRP13569 1480 aa17■□□□□ 0.31
CCDC66-210ENST00000460838 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
CCDC66-210ENST00000460838 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
CCDC66-210ENST00000460838 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
CCDC66-210ENST00000460838 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
CCDC66-210ENST00000460838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
CCDC66-210ENST00000460838 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
CCDC66-210ENST00000460838 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
CCDC66-210ENST00000460838 C1QBPQ07021 282 aaKnown RBP16.86■□□□□ 0.29
CCDC66-210ENST00000460838 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
CCDC66-210ENST00000460838 THOC2Q8NI27 1593 aaKnown RBP16.84■□□□□ 0.29
CCDC66-210ENST00000460838 SAMD1Q6SPF0 538 aaPredicted RBP16.83■□□□□ 0.28
CCDC66-210ENST00000460838 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
CCDC66-210ENST00000460838 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
CCDC66-210ENST00000460838 APLP2Q06481 763 aa16.76■□□□□ 0.27
CCDC66-210ENST00000460838 WDR62O43379 1518 aa16.73■□□□□ 0.27
CCDC66-210ENST00000460838 URB2Q14146 1524 aaKnown RBP16.71■□□□□ 0.27
CCDC66-210ENST00000460838 CUX2O14529 1486 aa16.71■□□□□ 0.27
CCDC66-210ENST00000460838 CACNB1Q02641 598 aaPredicted RBP16.7■□□□□ 0.26
CCDC66-210ENST00000460838 TOPBP1Q92547 1522 aa16.62■□□□□ 0.25
CCDC66-210ENST00000460838 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
CCDC66-210ENST00000460838 ATXN8OSP0DMR3 200 aa16.61■□□□□ 0.25
CCDC66-210ENST00000460838 CAPN15O75808 1086 aa16.6■□□□□ 0.25
CCDC66-210ENST00000460838 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
CCDC66-210ENST00000460838 CUX1P39880 1505 aa16.57■□□□□ 0.24
CCDC66-210ENST00000460838 SPINK5Q9NQ38 1064 aaPredicted RBP16.56■□□□□ 0.24
CCDC66-210ENST00000460838 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
CCDC66-210ENST00000460838 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
CCDC66-210ENST00000460838 SYNJ1O43426 1573 aa16.49■□□□□ 0.23
CCDC66-210ENST00000460838 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
CCDC66-210ENST00000460838 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
CCDC66-210ENST00000460838 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
CCDC66-210ENST00000460838 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
CCDC66-210ENST00000460838 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms