RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 PHLDB1Q86UU1 1377 aa28.12■■■□□ 2.09
CNEP1R1-203ENST00000458059 MAPKBP1O60336 1514 aa28.05■■■□□ 2.08
CNEP1R1-203ENST00000458059 FGD5Q6ZNL6 1462 aa28.04■■■□□ 2.08
CNEP1R1-203ENST00000458059 SETD5Q9C0A6 1442 aa28.03■■■□□ 2.08
CNEP1R1-203ENST00000458059 TIAM1Q13009 1591 aa28.02■■■□□ 2.08
CNEP1R1-203ENST00000458059 FHOD3Q2V2M9 1422 aa27.98■■■□□ 2.07
CNEP1R1-203ENST00000458059 LRRC9Q6ZRR7 1453 aa27.98■■■□□ 2.07
CNEP1R1-203ENST00000458059 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
CNEP1R1-203ENST00000458059 CADPSQ9ULU8 1353 aa27.96■■■□□ 2.07
CNEP1R1-203ENST00000458059 TRIM52Q96A61 297 aa27.92■■■□□ 2.06
CNEP1R1-203ENST00000458059 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
CNEP1R1-203ENST00000458059 FKBP8Q14318 412 aa27.89■■■□□ 2.05
CNEP1R1-203ENST00000458059 TSHZ2Q9NRE2 1034 aa27.87■■■□□ 2.05
CNEP1R1-203ENST00000458059 MYT1Q01538 1121 aa27.86■■■□□ 2.05
CNEP1R1-203ENST00000458059 PCF11O94913 1555 aaKnown RBP27.86■■■□□ 2.05
CNEP1R1-203ENST00000458059 FHAD1B1AJZ9 1412 aa27.81■■■□□ 2.04
CNEP1R1-203ENST00000458059 FANCD2Q9BXW9 1451 aa27.75■■■□□ 2.03
CNEP1R1-203ENST00000458059 PPP1R15AO75807 674 aaPredicted RBP27.75■■■□□ 2.03
CNEP1R1-203ENST00000458059 ANP32CO43423 234 aa27.71■■■□□ 2.03
CNEP1R1-203ENST00000458059 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
CNEP1R1-203ENST00000458059 NESP48681 1621 aa27.7■■■□□ 2.03
CNEP1R1-203ENST00000458059 MAP3K1Q13233 1512 aa27.7■■■□□ 2.02
CNEP1R1-203ENST00000458059 TONSLQ96HA7 1378 aa27.69■■■□□ 2.02
CNEP1R1-203ENST00000458059 PRDM2Q13029 1718 aa27.68■■■□□ 2.02
CNEP1R1-203ENST00000458059 MTUS2Q5JR59 1369 aa27.67■■■□□ 2.02
CNEP1R1-203ENST00000458059 CHIC2Q9UKJ5 165 aa27.67■■■□□ 2.02
CNEP1R1-203ENST00000458059 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
CNEP1R1-203ENST00000458059 CFAP43Q8NDM7 1665 aa27.62■■■□□ 2.01
CNEP1R1-203ENST00000458059 POLA1P09884 1462 aaPredicted RBP27.61■■■□□ 2.01
CNEP1R1-203ENST00000458059 NEFLP07196 543 aa27.61■■■□□ 2.01
CNEP1R1-203ENST00000458059 RRP7BPQ9NSQ0 103 aa27.61■■■□□ 2.01
CNEP1R1-203ENST00000458059 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
CNEP1R1-203ENST00000458059 PTPRKQ15262 1439 aa27.58■■■□□ 2.01
CNEP1R1-203ENST00000458059 FGD6Q6ZV73 1430 aa27.57■■■□□ 2
CNEP1R1-203ENST00000458059 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
CNEP1R1-203ENST00000458059 CCDC18Q5T9S5 1454 aa27.55■■■□□ 2
CNEP1R1-203ENST00000458059 FYCO1Q9BQS8 1478 aa27.55■■■□□ 2
CNEP1R1-203ENST00000458059 IRX6P78412 446 aaPredicted RBP27.55■■■□□ 2
CNEP1R1-203ENST00000458059 TOPBP1Q92547 1522 aa27.55■■■□□ 2
CNEP1R1-203ENST00000458059 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
CNEP1R1-203ENST00000458059 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
CNEP1R1-203ENST00000458059 DNMBPQ6XZF7 1577 aa27.46■■□□□ 1.99
CNEP1R1-203ENST00000458059 HNRNPUQ00839 825 aaKnown RBP eCLIP27.46■■□□□ 1.99
CNEP1R1-203ENST00000458059 FOXD1Q16676 465 aa27.46■■□□□ 1.99
CNEP1R1-203ENST00000458059 FMN1Q68DA7 1419 aa27.46■■□□□ 1.99
CNEP1R1-203ENST00000458059 AQRO60306 1485 aaKnown RBP eCLIP27.45■■□□□ 1.998e-7■■■□□ 16.1
CNEP1R1-203ENST00000458059 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
CNEP1R1-203ENST00000458059 CCER2I3L3R5 266 aa27.44■■□□□ 1.98
CNEP1R1-203ENST00000458059 CNGB1Q14028 1251 aaPredicted RBP27.42■■□□□ 1.98
CNEP1R1-203ENST00000458059 EFCAB5A4FU69 1503 aa27.41■■□□□ 1.98
CNEP1R1-203ENST00000458059 NCOA2Q15596 1464 aa27.4■■□□□ 1.98
CNEP1R1-203ENST00000458059 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.97
CNEP1R1-203ENST00000458059 NAIPQ13075 1403 aa27.38■■□□□ 1.97
CNEP1R1-203ENST00000458059 UACAQ9BZF9 1416 aa27.38■■□□□ 1.97
CNEP1R1-203ENST00000458059 ANP32EQ9BTT0 268 aa27.37■■□□□ 1.97
CNEP1R1-203ENST00000458059 HFM1A2PYH4 1435 aa27.36■■□□□ 1.97
CNEP1R1-203ENST00000458059 CTTNBP2Q8WZ74 1663 aa27.35■■□□□ 1.97
CNEP1R1-203ENST00000458059 HSPA5P11021 654 aaKnown RBP27.35■■□□□ 1.97
CNEP1R1-203ENST00000458059 RBM19Q9Y4C8 960 aaKnown RBP27.34■■□□□ 1.97
CNEP1R1-203ENST00000458059 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
CNEP1R1-203ENST00000458059 MYOM3Q5VTT5 1437 aa27.33■■□□□ 1.97
CNEP1R1-203ENST00000458059 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.32■■□□□ 1.96
CNEP1R1-203ENST00000458059 URB2Q14146 1524 aaKnown RBP27.32■■□□□ 1.96
CNEP1R1-203ENST00000458059 CCDC184Q52MB2 194 aa27.29■■□□□ 1.96
CNEP1R1-203ENST00000458059 WASHC2AQ641Q2 1341 aa27.29■■□□□ 1.96
CNEP1R1-203ENST00000458059 LRRIQ1Q96JM4 1722 aa27.29■■□□□ 1.96
CNEP1R1-203ENST00000458059 CUL7Q14999 1698 aa27.28■■□□□ 1.96
CNEP1R1-203ENST00000458059 GAPVD1Q14C86 1478 aa27.27■■□□□ 1.96
CNEP1R1-203ENST00000458059 FAM9BQ8IZU0 186 aa27.24■■□□□ 1.95
CNEP1R1-203ENST00000458059 SENP3-EIF4A1A0A087X0R7 540 aa27.22■■□□□ 1.95
CNEP1R1-203ENST00000458059 L3MBTL2Q969R5 705 aa27.21■■□□□ 1.95
CNEP1R1-203ENST00000458059 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
CNEP1R1-203ENST00000458059 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
CNEP1R1-203ENST00000458059 C11orf95C9JLR9 678 aaPredicted RBP27.19■■□□□ 1.94
CNEP1R1-203ENST00000458059 EIF4G2P78344 907 aaKnown RBP eCLIP27.18■■□□□ 1.94
CNEP1R1-203ENST00000458059 MPHOSPH9Q99550 1183 aa27.18■■□□□ 1.94
CNEP1R1-203ENST00000458059 POLR3GLQ9BT43 218 aa27.18■■□□□ 1.94
CNEP1R1-203ENST00000458059 SUPT6HQ7KZ85 1726 aaKnown RBP27.16■■□□□ 1.94
CNEP1R1-203ENST00000458059 KDM6BO15054 1643 aa27.14■■□□□ 1.94
CNEP1R1-203ENST00000458059 KDM5BQ9UGL1 1544 aa27.13■■□□□ 1.93
CNEP1R1-203ENST00000458059 CDK13Q14004 1512 aaKnown RBP27.12■■□□□ 1.93
CNEP1R1-203ENST00000458059 SAMD9Q5K651 1589 aa27.12■■□□□ 1.93
CNEP1R1-203ENST00000458059 ZNF644Q9H582 1327 aaPredicted RBP27.12■■□□□ 1.93
CNEP1R1-203ENST00000458059 ZNF326Q5BKZ1 582 aaKnown RBP27.1■■□□□ 1.93
CNEP1R1-203ENST00000458059 EHBP1L1Q8N3D4 1523 aa27.1■■□□□ 1.93
CNEP1R1-203ENST00000458059 DENND4BO75064 1496 aaPredicted RBP27.09■■□□□ 1.93
CNEP1R1-203ENST00000458059 MRS2Q9HD23 443 aa27.08■■□□□ 1.93
CNEP1R1-203ENST00000458059 UGGT2Q9NYU1 1516 aa27.07■■□□□ 1.92
CNEP1R1-203ENST00000458059 NBPF8Q3BBV2 869 aa27.06■■□□□ 1.92
CNEP1R1-203ENST00000458059 ABCA5Q8WWZ7 1642 aa27.06■■□□□ 1.92
CNEP1R1-203ENST00000458059 LAMC3Q9Y6N6 1575 aa27.03■■□□□ 1.92
CNEP1R1-203ENST00000458059 SLC4A1APQ9BWU0 796 aaKnown RBP27.02■■□□□ 1.92
CNEP1R1-203ENST00000458059 MSH5O43196 834 aa27.01■■□□□ 1.91
CNEP1R1-203ENST00000458059 CDK11AQ9UQ88 783 aaPredicted RBP27■■□□□ 1.91
CNEP1R1-203ENST00000458059 ZNF777Q9ULD5 760 aaPredicted RBP26.99■■□□□ 1.91
CNEP1R1-203ENST00000458059 PRKRIP1Q9H875 184 aaPredicted RBP26.99■■□□□ 1.91
CNEP1R1-203ENST00000458059 EPRSP07814 1512 aaKnown RBP26.98■■□□□ 1.91
CNEP1R1-203ENST00000458059 B4GALNT3Q6L9W6 998 aa26.98■■□□□ 1.91
CNEP1R1-203ENST00000458059 PDS5BQ9NTI5 1447 aa26.98■■□□□ 1.91
CNEP1R1-203ENST00000458059 THOC2Q8NI27 1593 aaKnown RBP26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms