RNA–Protein interactions for RNA: ENST00000457478.1

LINC01250-201, Transcript of long intergenic non-protein coding RNA 1250, humanhuman

TSL 2 BASIC

Gene LINC01250, Length 2,344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01250-201ENST00000457478 RAD54L2Q9Y4B4 1467 aa20.87■□□□□ 0.93
LINC01250-201ENST00000457478 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
LINC01250-201ENST00000457478 BCANQ96GW7 911 aa20.83■□□□□ 0.92
LINC01250-201ENST00000457478 CCDC136Q96JN2 1154 aa20.83■□□□□ 0.92
LINC01250-201ENST00000457478 EIF4G3O43432 1585 aaKnown RBP20.82■□□□□ 0.92
LINC01250-201ENST00000457478 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
LINC01250-201ENST00000457478 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.929e-24■■■■■ 80.5
LINC01250-201ENST00000457478 FKBP8Q14318 412 aa20.8■□□□□ 0.92
LINC01250-201ENST00000457478 TDRD9Q8NDG6 1382 aaKnown RBP20.77■□□□□ 0.92
LINC01250-201ENST00000457478 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
LINC01250-201ENST00000457478 DAXXQ9UER7 740 aaPredicted RBP20.76■□□□□ 0.91
LINC01250-201ENST00000457478 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
LINC01250-201ENST00000457478 BIVM-ERCC5R4GMW8 1640 aa20.73■□□□□ 0.91
LINC01250-201ENST00000457478 PKNOX2Q96KN3 472 aa20.72■□□□□ 0.91
LINC01250-201ENST00000457478 NEFLP07196 543 aa20.68■□□□□ 0.9
LINC01250-201ENST00000457478 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
LINC01250-201ENST00000457478 ABCA10Q8WWZ4 1543 aa20.67■□□□□ 0.9
LINC01250-201ENST00000457478 OSCARQ8IYS5 282 aa20.66■□□□□ 0.9
LINC01250-201ENST00000457478 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
LINC01250-201ENST00000457478 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
LINC01250-201ENST00000457478 FBLN2P98095 1184 aa20.61■□□□□ 0.89
LINC01250-201ENST00000457478 SNAPC4Q5SXM2 1469 aa20.61■□□□□ 0.89
LINC01250-201ENST00000457478 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.59■□□□□ 0.89
LINC01250-201ENST00000457478 ABCA5Q8WWZ7 1642 aa20.58■□□□□ 0.89
LINC01250-201ENST00000457478 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
LINC01250-201ENST00000457478 CHD1O14646 1710 aa20.55■□□□□ 0.88
LINC01250-201ENST00000457478 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
LINC01250-201ENST00000457478 ITGAEP38570 1179 aa20.54■□□□□ 0.88
LINC01250-201ENST00000457478 IL27Q8NEV9 243 aa20.54■□□□□ 0.88
LINC01250-201ENST00000457478 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
LINC01250-201ENST00000457478 CHMP7Q8WUX9 453 aaPredicted RBP20.52■□□□□ 0.88
LINC01250-201ENST00000457478 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
LINC01250-201ENST00000457478 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
LINC01250-201ENST00000457478 NOP58Q9Y2X3 529 aaKnown RBP20.45■□□□□ 0.86
LINC01250-201ENST00000457478 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
LINC01250-201ENST00000457478 ADAMTS12P58397 1594 aa20.4■□□□□ 0.86
LINC01250-201ENST00000457478 KIF27Q86VH2 1401 aa20.39■□□□□ 0.85
LINC01250-201ENST00000457478 NBR1Q14596 966 aa20.38■□□□□ 0.85
LINC01250-201ENST00000457478 RTN4Q9NQC3 1192 aaKnown RBP20.38■□□□□ 0.85
LINC01250-201ENST00000457478 PODXL2Q9NZ53 605 aa20.38■□□□□ 0.85
LINC01250-201ENST00000457478 FHAD1B1AJZ9 1412 aa20.37■□□□□ 0.85
LINC01250-201ENST00000457478 PLEKHG5O94827 1062 aa20.37■□□□□ 0.85
LINC01250-201ENST00000457478 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
LINC01250-201ENST00000457478 C11orf95C9JLR9 678 aaPredicted RBP20.36■□□□□ 0.85
LINC01250-201ENST00000457478 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
LINC01250-201ENST00000457478 GRIN2AQ12879 1464 aa20.35■□□□□ 0.85
LINC01250-201ENST00000457478 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
LINC01250-201ENST00000457478 RIMBP3CA6NJZ7 1639 aa20.32■□□□□ 0.84
LINC01250-201ENST00000457478 RIMBP3BA6NNM3 1639 aa20.32■□□□□ 0.84
LINC01250-201ENST00000457478 RIMBP3Q9UFD9 1639 aa20.32■□□□□ 0.84
LINC01250-201ENST00000457478 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
LINC01250-201ENST00000457478 CEP162Q5TB80 1403 aa20.3■□□□□ 0.84
LINC01250-201ENST00000457478 IGF1RP08069 1367 aa20.3■□□□□ 0.84
LINC01250-201ENST00000457478 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
LINC01250-201ENST00000457478 CEP170Q5SW79 1584 aa20.25■□□□□ 0.83
LINC01250-201ENST00000457478 NUP160Q12769 1436 aa20.24■□□□□ 0.83
LINC01250-201ENST00000457478 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
LINC01250-201ENST00000457478 GLIPR1L2Q4G1C9 344 aa20.23■□□□□ 0.83
LINC01250-201ENST00000457478 CUL7Q14999 1698 aa20.23■□□□□ 0.83
LINC01250-201ENST00000457478 RUSC2Q8N2Y8 1516 aa20.21■□□□□ 0.83
LINC01250-201ENST00000457478 WASHC2CQ9Y4E1 1318 aa20.2■□□□□ 0.82
LINC01250-201ENST00000457478 CARMIL1Q5VZK9 1371 aa20.19■□□□□ 0.82
LINC01250-201ENST00000457478 RSPH6AQ9H0K4 717 aa20.19■□□□□ 0.82
LINC01250-201ENST00000457478 CYB5RLQ6IPT4 315 aa20.18■□□□□ 0.82
LINC01250-201ENST00000457478 HNRNPUL2Q1KMD3 747 aaKnown RBP20.18■□□□□ 0.82
LINC01250-201ENST00000457478 ARAP1Q96P48 1450 aa20.15■□□□□ 0.82
LINC01250-201ENST00000457478 TNIKQ9UKE5 1360 aa20.15■□□□□ 0.82
LINC01250-201ENST00000457478 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
LINC01250-201ENST00000457478 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
LINC01250-201ENST00000457478 USP35Q9P2H5 1018 aa20.11■□□□□ 0.81
LINC01250-201ENST00000457478 IPO9Q96P70 1041 aaKnown RBP20.09■□□□□ 0.81
LINC01250-201ENST00000457478 PPP4R2Q9NY27 417 aa20.09■□□□□ 0.81
LINC01250-201ENST00000457478 ZMYND15Q9H091 742 aa20.08■□□□□ 0.81
LINC01250-201ENST00000457478 JPH4Q96JJ6 628 aa20.08■□□□□ 0.8
LINC01250-201ENST00000457478 SHROOM2Q13796 1616 aa20.07■□□□□ 0.8
LINC01250-201ENST00000457478 ERCC6L2Q5T890 1561 aa20.07■□□□□ 0.8
LINC01250-201ENST00000457478 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
LINC01250-201ENST00000457478 KIAA0586Q9BVV6 1533 aa20.05■□□□□ 0.8
LINC01250-201ENST00000457478 PRG4Q92954 1404 aaPredicted RBP20.04■□□□□ 0.8
LINC01250-201ENST00000457478 TRIM52Q96A61 297 aa20.04■□□□□ 0.8
LINC01250-201ENST00000457478 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
LINC01250-201ENST00000457478 ZBTB47Q9UFB7 747 aaPredicted RBP20.02■□□□□ 0.79
LINC01250-201ENST00000457478 EEA1Q15075 1411 aa19.99■□□□□ 0.79
LINC01250-201ENST00000457478 PRXQ9BXM0 1461 aa19.97■□□□□ 0.79
LINC01250-201ENST00000457478 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
LINC01250-201ENST00000457478 BRPF3Q9ULD4 1205 aa19.95■□□□□ 0.78
LINC01250-201ENST00000457478 TIMELESSQ9UNS1 1208 aa19.94■□□□□ 0.78
LINC01250-201ENST00000457478 IQGAP2Q13576 1575 aa19.94■□□□□ 0.78
LINC01250-201ENST00000457478 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
LINC01250-201ENST00000457478 PPP1R15AO75807 674 aaPredicted RBP19.9■□□□□ 0.78
LINC01250-201ENST00000457478 IRX6P78412 446 aaPredicted RBP19.89■□□□□ 0.77
LINC01250-201ENST00000457478 NEFMP07197 916 aa19.88■□□□□ 0.77
LINC01250-201ENST00000457478 CARMIL2Q6F5E8 1435 aa19.86■□□□□ 0.77
LINC01250-201ENST00000457478 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
LINC01250-201ENST00000457478 CTTNBP2Q8WZ74 1663 aa19.85■□□□□ 0.77
LINC01250-201ENST00000457478 ANP32CO43423 234 aa19.84■□□□□ 0.77
LINC01250-201ENST00000457478 PPM1GO15355 546 aaPredicted RBP19.82■□□□□ 0.76
LINC01250-201ENST00000457478 UGGT2Q9NYU1 1516 aa19.82■□□□□ 0.76
LINC01250-201ENST00000457478 GSE1Q14687 1217 aa19.81■□□□□ 0.76
LINC01250-201ENST00000457478 TRHP20396 242 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms