RNA–Protein interactions for RNA: ENST00000457153.6

SYT1-204, Transcript of synaptotagmin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYT1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-204ENST00000457153 CFTRP13569 1480 aa19.54■□□□□ 0.72
SYT1-204ENST00000457153 ARHGAP35Q9NRY4 1499 aa19.54■□□□□ 0.72
SYT1-204ENST00000457153 FMN1Q68DA7 1419 aa19.53■□□□□ 0.72
SYT1-204ENST00000457153 PRXQ9BXM0 1461 aa19.52■□□□□ 0.71
SYT1-204ENST00000457153 PDS5BQ9NTI5 1447 aa19.5■□□□□ 0.71
SYT1-204ENST00000457153 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
SYT1-204ENST00000457153 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
SYT1-204ENST00000457153 IGF1RP08069 1367 aa19.49■□□□□ 0.71
SYT1-204ENST00000457153 RAB3GAP2Q9H2M9 1393 aa19.49■□□□□ 0.71
SYT1-204ENST00000457153 FANCD2Q9BXW9 1451 aa19.47■□□□□ 0.71
SYT1-204ENST00000457153 BCANQ96GW7 911 aa19.47■□□□□ 0.71
SYT1-204ENST00000457153 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
SYT1-204ENST00000457153 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
SYT1-204ENST00000457153 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
SYT1-204ENST00000457153 SIN3AQ96ST3 1273 aa19.42■□□□□ 0.7
SYT1-204ENST00000457153 RRP7BPQ9NSQ0 103 aa19.41■□□□□ 0.7
SYT1-204ENST00000457153 CNGB1Q14028 1251 aaPredicted RBP19.4■□□□□ 0.7
SYT1-204ENST00000457153 MYT1LQ9UL68 1186 aa19.4■□□□□ 0.7
SYT1-204ENST00000457153 CUX1P39880 1505 aa19.4■□□□□ 0.7
SYT1-204ENST00000457153 EIF4G2P78344 907 aaKnown RBP eCLIP19.39■□□□□ 0.7
SYT1-204ENST00000457153 FKBP8Q14318 412 aa19.39■□□□□ 0.69
SYT1-204ENST00000457153 CHMP7Q8WUX9 453 aaPredicted RBP19.39■□□□□ 0.69
SYT1-204ENST00000457153 FHOD3Q2V2M9 1422 aa19.37■□□□□ 0.69
SYT1-204ENST00000457153 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
SYT1-204ENST00000457153 RRBP1Q9P2E9 1410 aaKnown RBP19.35■□□□□ 0.69
SYT1-204ENST00000457153 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
SYT1-204ENST00000457153 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.69
SYT1-204ENST00000457153 HIRIP3Q9BW71 556 aaPredicted RBP19.31■□□□□ 0.68
SYT1-204ENST00000457153 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
SYT1-204ENST00000457153 TSPY4P0CV99 314 aa19.3■□□□□ 0.68
SYT1-204ENST00000457153 TSPY10P0CW01 314 aa19.3■□□□□ 0.68
SYT1-204ENST00000457153 BIVM-ERCC5R4GMW8 1640 aa19.3■□□□□ 0.68
SYT1-204ENST00000457153 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
SYT1-204ENST00000457153 LRRC9Q6ZRR7 1453 aa19.27■□□□□ 0.67
SYT1-204ENST00000457153 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
SYT1-204ENST00000457153 PLEKHD1A6NEE1 506 aa19.25■□□□□ 0.67
SYT1-204ENST00000457153 CFDP1Q9UEE9 299 aaPredicted RBP19.25■□□□□ 0.67
SYT1-204ENST00000457153 RAD54L2Q9Y4B4 1467 aa19.2■□□□□ 0.66
SYT1-204ENST00000457153 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
SYT1-204ENST00000457153 EFCAB5A4FU69 1503 aa19.19■□□□□ 0.66
SYT1-204ENST00000457153 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
SYT1-204ENST00000457153 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
SYT1-204ENST00000457153 GAPVD1Q14C86 1478 aa19.18■□□□□ 0.66
SYT1-204ENST00000457153 FYCO1Q9BQS8 1478 aa19.17■□□□□ 0.66
SYT1-204ENST00000457153 SUPT16HQ9Y5B9 1047 aaKnown RBP19.17■□□□□ 0.66
SYT1-204ENST00000457153 PHLDB1Q86UU1 1377 aa19.17■□□□□ 0.66
SYT1-204ENST00000457153 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
SYT1-204ENST00000457153 MAP3K1Q13233 1512 aa19.14■□□□□ 0.66
SYT1-204ENST00000457153 ERCC6Q03468 1493 aa19.14■□□□□ 0.65
SYT1-204ENST00000457153 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
SYT1-204ENST00000457153 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
SYT1-204ENST00000457153 DNMBPQ6XZF7 1577 aa19.12■□□□□ 0.65
SYT1-204ENST00000457153 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
SYT1-204ENST00000457153 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
SYT1-204ENST00000457153 TMC1Q8TDI8 760 aa19.09■□□□□ 0.65
SYT1-204ENST00000457153 CARMIL2Q6F5E8 1435 aa19.09■□□□□ 0.65
SYT1-204ENST00000457153 POLA1P09884 1462 aaPredicted RBP19.08■□□□□ 0.64
SYT1-204ENST00000457153 DAXXQ9UER7 740 aaPredicted RBP19.08■□□□□ 0.64
SYT1-204ENST00000457153 MPHOSPH9Q99550 1183 aa19.07■□□□□ 0.64
SYT1-204ENST00000457153 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
SYT1-204ENST00000457153 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.64
SYT1-204ENST00000457153 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
SYT1-204ENST00000457153 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
SYT1-204ENST00000457153 UACAQ9BZF9 1416 aa19.03■□□□□ 0.64
SYT1-204ENST00000457153 KDM2AQ9Y2K7 1162 aa19.02■□□□□ 0.63
SYT1-204ENST00000457153 AQRO60306 1485 aaKnown RBP eCLIP19■□□□□ 0.63
SYT1-204ENST00000457153 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.63
SYT1-204ENST00000457153 NCOA2Q15596 1464 aa18.98■□□□□ 0.63
SYT1-204ENST00000457153 CUL7Q14999 1698 aa18.98■□□□□ 0.63
SYT1-204ENST00000457153 NESP48681 1621 aa18.97■□□□□ 0.63
SYT1-204ENST00000457153 RTL5Q5HYW3 569 aaPredicted RBP18.96■□□□□ 0.63
SYT1-204ENST00000457153 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
SYT1-204ENST00000457153 ANKRD30AQ9BXX3 1397 aa18.96■□□□□ 0.63
SYT1-204ENST00000457153 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
SYT1-204ENST00000457153 L3MBTL2Q969R5 705 aa18.93■□□□□ 0.62
SYT1-204ENST00000457153 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
SYT1-204ENST00000457153 ANP32AP39687 249 aaKnown RBP18.91■□□□□ 0.62
SYT1-204ENST00000457153 PCF11O94913 1555 aaKnown RBP18.9■□□□□ 0.62
SYT1-204ENST00000457153 CCDC136Q96JN2 1154 aa18.9■□□□□ 0.62
SYT1-204ENST00000457153 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
SYT1-204ENST00000457153 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
SYT1-204ENST00000457153 GRIN2BQ13224 1484 aa18.9■□□□□ 0.62
SYT1-204ENST00000457153 PKD2Q13563 968 aa18.89■□□□□ 0.61
SYT1-204ENST00000457153 FOXD1Q16676 465 aa18.88■□□□□ 0.61
SYT1-204ENST00000457153 PPP4R2Q9NY27 417 aa18.88■□□□□ 0.61
SYT1-204ENST00000457153 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
SYT1-204ENST00000457153 MIA2Q96PC5 1412 aa18.85■□□□□ 0.61
SYT1-204ENST00000457153 JPH4Q96JJ6 628 aa18.84■□□□□ 0.61
SYT1-204ENST00000457153 RSPH4AQ5TD94 716 aa18.84■□□□□ 0.61
SYT1-204ENST00000457153 KCNH8Q96L42 1107 aa18.83■□□□□ 0.61
SYT1-204ENST00000457153 NPM1P06748 294 aaKnown RBP eCLIP18.83■□□□□ 0.6
SYT1-204ENST00000457153 NUP155O75694 1391 aa18.82■□□□□ 0.6
SYT1-204ENST00000457153 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
SYT1-204ENST00000457153 RGL3Q3MIN7 710 aa18.81■□□□□ 0.6
SYT1-204ENST00000457153 CDCA8Q53HL2 280 aa18.81■□□□□ 0.6
SYT1-204ENST00000457153 MRC2Q9UBG0 1479 aa18.81■□□□□ 0.6
SYT1-204ENST00000457153 HECW1Q76N89 1606 aa18.81■□□□□ 0.6
SYT1-204ENST00000457153 DCAF11Q8TEB1 546 aa18.79■□□□□ 0.6
SYT1-204ENST00000457153 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
SYT1-204ENST00000457153 IFT140Q96RY7 1462 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms