RNA–Protein interactions for RNA: ENST00000453262.2

TRBV21-1-201, Transcript of T cell receptor beta variable 21-1 (pseudogene), humanhuman

BASIC

Gene TRBV21-1, Length 348 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV21-1-201ENST00000453262 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
TRBV21-1-201ENST00000453262 ATXN8OSP0DMR3 200 aa14.24□□□□□ -0.13
TRBV21-1-201ENST00000453262 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
TRBV21-1-201ENST00000453262 URB2Q14146 1524 aaKnown RBP14.23□□□□□ -0.13
TRBV21-1-201ENST00000453262 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
TRBV21-1-201ENST00000453262 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
TRBV21-1-201ENST00000453262 WDR62O43379 1518 aa14.17□□□□□ -0.14
TRBV21-1-201ENST00000453262 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
TRBV21-1-201ENST00000453262 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
TRBV21-1-201ENST00000453262 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
TRBV21-1-201ENST00000453262 PITPNM1O00562 1244 aa14.1□□□□□ -0.15
TRBV21-1-201ENST00000453262 WDR97A6NE52 1622 aa14.08□□□□□ -0.16
TRBV21-1-201ENST00000453262 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
TRBV21-1-201ENST00000453262 SOGA1O94964 1423 aa14.05□□□□□ -0.16
TRBV21-1-201ENST00000453262 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
TRBV21-1-201ENST00000453262 FBLN2P98095 1184 aa14.04□□□□□ -0.16
TRBV21-1-201ENST00000453262 CUX2O14529 1486 aa14.03□□□□□ -0.16
TRBV21-1-201ENST00000453262 IFT140Q96RY7 1462 aa14□□□□□ -0.17
TRBV21-1-201ENST00000453262 FXR2P51116 673 aaKnown RBP eCLIP14□□□□□ -0.17
TRBV21-1-201ENST00000453262 FAM9AQ8IZU1 332 aaPredicted RBP14□□□□□ -0.17
TRBV21-1-201ENST00000453262 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
TRBV21-1-201ENST00000453262 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
TRBV21-1-201ENST00000453262 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
TRBV21-1-201ENST00000453262 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
TRBV21-1-201ENST00000453262 SPDYE2Q495Y8 402 aa13.98□□□□□ -0.17
TRBV21-1-201ENST00000453262 ABCA10Q8WWZ4 1543 aa13.98□□□□□ -0.17
TRBV21-1-201ENST00000453262 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
TRBV21-1-201ENST00000453262 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
TRBV21-1-201ENST00000453262 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.18
TRBV21-1-201ENST00000453262 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
TRBV21-1-201ENST00000453262 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
TRBV21-1-201ENST00000453262 KIF27Q86VH2 1401 aa13.94□□□□□ -0.18
TRBV21-1-201ENST00000453262 TDRD9Q8NDG6 1382 aaKnown RBP13.94□□□□□ -0.18
TRBV21-1-201ENST00000453262 HAX1O00165 279 aa13.9□□□□□ -0.18
TRBV21-1-201ENST00000453262 AQRO60306 1485 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRBV21-1-201ENST00000453262 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
TRBV21-1-201ENST00000453262 EEA1Q15075 1411 aa13.9□□□□□ -0.19
TRBV21-1-201ENST00000453262 EHMT2Q96KQ7 1210 aa13.86□□□□□ -0.19
TRBV21-1-201ENST00000453262 CUL7Q14999 1698 aa13.85□□□□□ -0.19
TRBV21-1-201ENST00000453262 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
TRBV21-1-201ENST00000453262 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
TRBV21-1-201ENST00000453262 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
TRBV21-1-201ENST00000453262 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
TRBV21-1-201ENST00000453262 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
TRBV21-1-201ENST00000453262 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
TRBV21-1-201ENST00000453262 KIF21BO75037 1637 aa13.8□□□□□ -0.2
TRBV21-1-201ENST00000453262 CLEC11AQ9Y240 323 aa13.8□□□□□ -0.2
TRBV21-1-201ENST00000453262 CHD1O14646 1710 aa13.79□□□□□ -0.2
TRBV21-1-201ENST00000453262 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
TRBV21-1-201ENST00000453262 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
TRBV21-1-201ENST00000453262 IGF1RP08069 1367 aa13.79□□□□□ -0.2
TRBV21-1-201ENST00000453262 CARMIL1Q5VZK9 1371 aa13.76□□□□□ -0.21
TRBV21-1-201ENST00000453262 MAGI1Q96QZ7 1491 aaPredicted RBP13.75□□□□□ -0.21
TRBV21-1-201ENST00000453262 EVX2Q03828 476 aa13.74□□□□□ -0.21
TRBV21-1-201ENST00000453262 GOLGA3Q08378 1498 aa13.74□□□□□ -0.21
TRBV21-1-201ENST00000453262 PRXQ9BXM0 1461 aa13.74□□□□□ -0.21
TRBV21-1-201ENST00000453262 RAPGEF2Q9Y4G8 1499 aa13.74□□□□□ -0.21
TRBV21-1-201ENST00000453262 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
TRBV21-1-201ENST00000453262 LOC105371045A0A1W2PR82 267 aa13.73□□□□□ -0.21
TRBV21-1-201ENST00000453262 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
TRBV21-1-201ENST00000453262 CTTNBP2Q8WZ74 1663 aa13.72□□□□□ -0.21
TRBV21-1-201ENST00000453262 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
TRBV21-1-201ENST00000453262 UBTFP17480 764 aaKnown RBP13.69□□□□□ -0.22
TRBV21-1-201ENST00000453262 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
TRBV21-1-201ENST00000453262 GRIN2AQ12879 1464 aa13.67□□□□□ -0.22
TRBV21-1-201ENST00000453262 CEP170Q5SW79 1584 aa13.62□□□□□ -0.23
TRBV21-1-201ENST00000453262 RANGAP1P46060 587 aaPredicted RBP13.61□□□□□ -0.23
TRBV21-1-201ENST00000453262 IQGAP2Q13576 1575 aa13.58□□□□□ -0.23
TRBV21-1-201ENST00000453262 TNIKQ9UKE5 1360 aa13.58□□□□□ -0.24
TRBV21-1-201ENST00000453262 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
TRBV21-1-201ENST00000453262 NUP160Q12769 1436 aa13.56□□□□□ -0.24
TRBV21-1-201ENST00000453262 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
TRBV21-1-201ENST00000453262 PRR29P0C7W0 189 aa13.54□□□□□ -0.24
TRBV21-1-201ENST00000453262 CEP162Q5TB80 1403 aa13.53□□□□□ -0.24
TRBV21-1-201ENST00000453262 KIAA0586Q9BVV6 1533 aa13.53□□□□□ -0.24
TRBV21-1-201ENST00000453262 CLASP1Q7Z460 1538 aa13.5□□□□□ -0.25
TRBV21-1-201ENST00000453262 CLIP1P30622 1438 aa13.5□□□□□ -0.25
TRBV21-1-201ENST00000453262 SHROOM2Q13796 1616 aa13.46□□□□□ -0.25
TRBV21-1-201ENST00000453262 SAMD9Q5K651 1589 aa13.46□□□□□ -0.25
TRBV21-1-201ENST00000453262 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.25
TRBV21-1-201ENST00000453262 EFCAB5A4FU69 1503 aa13.45□□□□□ -0.26
TRBV21-1-201ENST00000453262 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
TRBV21-1-201ENST00000453262 ARHGAP35Q9NRY4 1499 aa13.44□□□□□ -0.26
TRBV21-1-201ENST00000453262 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
TRBV21-1-201ENST00000453262 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
TRBV21-1-201ENST00000453262 TTBK1Q5TCY1 1321 aaPredicted RBP13.41□□□□□ -0.26
TRBV21-1-201ENST00000453262 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
TRBV21-1-201ENST00000453262 DISP1Q96F81 1524 aa13.41□□□□□ -0.26
TRBV21-1-201ENST00000453262 ARAP1Q96P48 1450 aa13.41□□□□□ -0.26
TRBV21-1-201ENST00000453262 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
TRBV21-1-201ENST00000453262 PRG4Q92954 1404 aaPredicted RBP13.4□□□□□ -0.26
TRBV21-1-201ENST00000453262 GABBR2O75899 941 aa13.4□□□□□ -0.26
TRBV21-1-201ENST00000453262 CARMIL2Q6F5E8 1435 aa13.39□□□□□ -0.27
TRBV21-1-201ENST00000453262 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
TRBV21-1-201ENST00000453262 FARP1Q9Y4F1 1045 aaPredicted RBP13.33□□□□□ -0.28
TRBV21-1-201ENST00000453262 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
TRBV21-1-201ENST00000453262 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
TRBV21-1-201ENST00000453262 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
TRBV21-1-201ENST00000453262 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
TRBV21-1-201ENST00000453262 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms