RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 SENP3-EIF4A1A0A087X0R7 540 aa19.4■□□□□ 0.7
OTUD4-201ENST00000447906 IRX6P78412 446 aaPredicted RBP19.39■□□□□ 0.7
OTUD4-201ENST00000447906 FAM9BQ8IZU0 186 aa19.39■□□□□ 0.7
OTUD4-201ENST00000447906 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
OTUD4-201ENST00000447906 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
OTUD4-201ENST00000447906 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
OTUD4-201ENST00000447906 KCNH8Q96L42 1107 aa19.29■□□□□ 0.68
OTUD4-201ENST00000447906 HMGXB3Q12766 1538 aa19.28■□□□□ 0.68
OTUD4-201ENST00000447906 CFTRP13569 1480 aa19.28■□□□□ 0.68
OTUD4-201ENST00000447906 RAB3GAP2Q9H2M9 1393 aa19.28■□□□□ 0.68
OTUD4-201ENST00000447906 TDRD9Q8NDG6 1382 aaKnown RBP19.28■□□□□ 0.68
OTUD4-201ENST00000447906 CLSPNQ9HAW4 1339 aa19.27■□□□□ 0.68
OTUD4-201ENST00000447906 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
OTUD4-201ENST00000447906 SALL2Q9Y467 1007 aaPredicted RBP19.26■□□□□ 0.67
OTUD4-201ENST00000447906 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
OTUD4-201ENST00000447906 KDM2AQ9Y2K7 1162 aa19.26■□□□□ 0.67
OTUD4-201ENST00000447906 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
OTUD4-201ENST00000447906 DHX57Q6P158 1386 aaKnown RBP19.23■□□□□ 0.67
OTUD4-201ENST00000447906 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
OTUD4-201ENST00000447906 FOXD1Q16676 465 aa19.22■□□□□ 0.67
OTUD4-201ENST00000447906 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
OTUD4-201ENST00000447906 IGF1RP08069 1367 aa19.19■□□□□ 0.66
OTUD4-201ENST00000447906 MRS2Q9HD23 443 aa19.19■□□□□ 0.66
OTUD4-201ENST00000447906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.665e-6■■■□□ 15.4
OTUD4-201ENST00000447906 EIF4G2P78344 907 aaKnown RBP eCLIP19.18■□□□□ 0.66
OTUD4-201ENST00000447906 SETD5Q9C0A6 1442 aa19.17■□□□□ 0.66
OTUD4-201ENST00000447906 FHOD3Q2V2M9 1422 aa19.17■□□□□ 0.66
OTUD4-201ENST00000447906 FGD5Q6ZNL6 1462 aa19.17■□□□□ 0.66
OTUD4-201ENST00000447906 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
OTUD4-201ENST00000447906 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
OTUD4-201ENST00000447906 CC2D2AQ9P2K1 1620 aa19.14■□□□□ 0.65
OTUD4-201ENST00000447906 CUX1P39880 1505 aa19.12■□□□□ 0.65
OTUD4-201ENST00000447906 KIF21BO75037 1637 aa19.12■□□□□ 0.65
OTUD4-201ENST00000447906 ERCC6Q03468 1493 aa19.08■□□□□ 0.65
OTUD4-201ENST00000447906 RAD54L2Q9Y4B4 1467 aa19.08■□□□□ 0.65
OTUD4-201ENST00000447906 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
OTUD4-201ENST00000447906 TSPY4P0CV99 314 aa19.07■□□□□ 0.64
OTUD4-201ENST00000447906 TSPY10P0CW01 314 aa19.07■□□□□ 0.64
OTUD4-201ENST00000447906 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
OTUD4-201ENST00000447906 RGL3Q3MIN7 710 aa19.06■□□□□ 0.64
OTUD4-201ENST00000447906 NESP48681 1621 aa19.06■□□□□ 0.64
OTUD4-201ENST00000447906 PRXQ9BXM0 1461 aa19.06■□□□□ 0.64
OTUD4-201ENST00000447906 ARAP1Q96P48 1450 aa19.05■□□□□ 0.64
OTUD4-201ENST00000447906 TMC1Q8TDI8 760 aa19.03■□□□□ 0.64
OTUD4-201ENST00000447906 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.64
OTUD4-201ENST00000447906 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
OTUD4-201ENST00000447906 PLEKHD1A6NEE1 506 aa18.98■□□□□ 0.63
OTUD4-201ENST00000447906 HSPA5P11021 654 aaKnown RBP18.98■□□□□ 0.63
OTUD4-201ENST00000447906 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
OTUD4-201ENST00000447906 PHLDB1Q86UU1 1377 aa18.96■□□□□ 0.63
OTUD4-201ENST00000447906 FMN1Q68DA7 1419 aa18.95■□□□□ 0.62
OTUD4-201ENST00000447906 DAXXQ9UER7 740 aaPredicted RBP18.95■□□□□ 0.62
OTUD4-201ENST00000447906 NBR1Q14596 966 aa18.94■□□□□ 0.62
OTUD4-201ENST00000447906 NPM2Q86SE8 214 aaKnown RBP18.94■□□□□ 0.62
OTUD4-201ENST00000447906 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
OTUD4-201ENST00000447906 TSHZ2Q9NRE2 1034 aa18.92■□□□□ 0.62
OTUD4-201ENST00000447906 MPHOSPH9Q99550 1183 aa18.92■□□□□ 0.62
OTUD4-201ENST00000447906 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
OTUD4-201ENST00000447906 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
OTUD4-201ENST00000447906 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
OTUD4-201ENST00000447906 L3MBTL2Q969R5 705 aa18.9■□□□□ 0.62
OTUD4-201ENST00000447906 ANP32EQ9BTT0 268 aa18.9■□□□□ 0.62
OTUD4-201ENST00000447906 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
OTUD4-201ENST00000447906 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.61
OTUD4-201ENST00000447906 POLA1P09884 1462 aaPredicted RBP18.88■□□□□ 0.61
OTUD4-201ENST00000447906 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
OTUD4-201ENST00000447906 B4GALNT3Q6L9W6 998 aa18.84■□□□□ 0.61
OTUD4-201ENST00000447906 RTL5Q5HYW3 569 aaPredicted RBP18.84■□□□□ 0.61
OTUD4-201ENST00000447906 BIVM-ERCC5R4GMW8 1640 aa18.83■□□□□ 0.61
OTUD4-201ENST00000447906 PKD2Q13563 968 aa18.82■□□□□ 0.6
OTUD4-201ENST00000447906 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
OTUD4-201ENST00000447906 DCAF11Q8TEB1 546 aa18.81■□□□□ 0.6
OTUD4-201ENST00000447906 RBM19Q9Y4C8 960 aaKnown RBP18.8■□□□□ 0.6
OTUD4-201ENST00000447906 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
OTUD4-201ENST00000447906 AQRO60306 1485 aaKnown RBP eCLIP18.78■□□□□ 0.61e-6■■□□□ 14.5
OTUD4-201ENST00000447906 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
OTUD4-201ENST00000447906 ZNF644Q9H582 1327 aaPredicted RBP18.78■□□□□ 0.6
OTUD4-201ENST00000447906 LRRC9Q6ZRR7 1453 aa18.77■□□□□ 0.59
OTUD4-201ENST00000447906 RRBP1Q9P2E9 1410 aaKnown RBP18.74■□□□□ 0.59
OTUD4-201ENST00000447906 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
OTUD4-201ENST00000447906 ABCA10Q8WWZ4 1543 aa18.72■□□□□ 0.59
OTUD4-201ENST00000447906 CANXP27824 592 aaKnown RBP18.7■□□□□ 0.58
OTUD4-201ENST00000447906 LAMC3Q9Y6N6 1575 aa18.7■□□□□ 0.58
OTUD4-201ENST00000447906 CC2D1BQ5T0F9 858 aaKnown RBP18.7■□□□□ 0.58
OTUD4-201ENST00000447906 JPH4Q96JJ6 628 aa18.69■□□□□ 0.58
OTUD4-201ENST00000447906 HNRNPMP52272 730 aaKnown RBP eCLIP18.69■□□□□ 0.58
OTUD4-201ENST00000447906 CCDC18Q5T9S5 1454 aa18.68■□□□□ 0.58
OTUD4-201ENST00000447906 CARMIL2Q6F5E8 1435 aa18.67■□□□□ 0.58
OTUD4-201ENST00000447906 FGD6Q6ZV73 1430 aa18.67■□□□□ 0.58
OTUD4-201ENST00000447906 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
OTUD4-201ENST00000447906 NUP155O75694 1391 aa18.65■□□□□ 0.58
OTUD4-201ENST00000447906 PPP4R2Q9NY27 417 aa18.64■□□□□ 0.58
OTUD4-201ENST00000447906 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
OTUD4-201ENST00000447906 WDR43Q15061 677 aaKnown RBP eCLIP18.62■□□□□ 0.57
OTUD4-201ENST00000447906 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
OTUD4-201ENST00000447906 GRIN2BQ13224 1484 aa18.61■□□□□ 0.57
OTUD4-201ENST00000447906 NPM1P06748 294 aaKnown RBP eCLIP18.58■□□□□ 0.56
OTUD4-201ENST00000447906 PRKRIP1Q9H875 184 aaPredicted RBP18.57■□□□□ 0.56
OTUD4-201ENST00000447906 FYCO1Q9BQS8 1478 aa18.57■□□□□ 0.56
OTUD4-201ENST00000447906 EFCAB5A4FU69 1503 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms