RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 PITPNM1O00562 1244 aa14.49□□□□□ -0.09
LINC00578-204ENST00000446548 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
LINC00578-204ENST00000446548 CLEC11AQ9Y240 323 aa14.47□□□□□ -0.09
LINC00578-204ENST00000446548 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
LINC00578-204ENST00000446548 TOP2BQ02880 1626 aa14.43□□□□□ -0.1
LINC00578-204ENST00000446548 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
LINC00578-204ENST00000446548 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
LINC00578-204ENST00000446548 CUX1P39880 1505 aa14.38□□□□□ -0.11
LINC00578-204ENST00000446548 PROM2Q8N271 834 aa14.37□□□□□ -0.11
LINC00578-204ENST00000446548 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
LINC00578-204ENST00000446548 LOC105371045A0A1W2PR82 267 aa14.35□□□□□ -0.11
LINC00578-204ENST00000446548 NESP48681 1621 aa14.34□□□□□ -0.11
LINC00578-204ENST00000446548 SOGA1O94964 1423 aa14.33□□□□□ -0.11
LINC00578-204ENST00000446548 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
LINC00578-204ENST00000446548 PRR29P0C7W0 189 aa14.32□□□□□ -0.12
LINC00578-204ENST00000446548 RUSC2Q8N2Y8 1516 aa14.31□□□□□ -0.12
LINC00578-204ENST00000446548 FANCD2Q9BXW9 1451 aa14.31□□□□□ -0.12
LINC00578-204ENST00000446548 EEA1Q15075 1411 aa14.29□□□□□ -0.12
LINC00578-204ENST00000446548 KIF21AQ7Z4S6 1674 aa14.26□□□□□ -0.13
LINC00578-204ENST00000446548 FXR2P51116 673 aaKnown RBP eCLIP14.25□□□□□ -0.13
LINC00578-204ENST00000446548 POTEHQ6S545 545 aa14.25□□□□□ -0.13
LINC00578-204ENST00000446548 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
LINC00578-204ENST00000446548 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
LINC00578-204ENST00000446548 CEP164Q9UPV0 1460 aa14.21□□□□□ -0.13
LINC00578-204ENST00000446548 KIF21BO75037 1637 aa14.19□□□□□ -0.14
LINC00578-204ENST00000446548 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
LINC00578-204ENST00000446548 TOPBP1Q92547 1522 aa14.18□□□□□ -0.14
LINC00578-204ENST00000446548 URB2Q14146 1524 aaKnown RBP14.17□□□□□ -0.14
LINC00578-204ENST00000446548 PDS5BQ9NTI5 1447 aa14.16□□□□□ -0.14
LINC00578-204ENST00000446548 PRKAR2AP13861 404 aaKnown RBP14.15□□□□□ -0.14
LINC00578-204ENST00000446548 FBXO3Q9UK99 471 aa14.14□□□□□ -0.15
LINC00578-204ENST00000446548 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
LINC00578-204ENST00000446548 GOLGA3Q08378 1498 aa14.12□□□□□ -0.15
LINC00578-204ENST00000446548 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
LINC00578-204ENST00000446548 KIF27Q86VH2 1401 aa14.09□□□□□ -0.15
LINC00578-204ENST00000446548 CUX2O14529 1486 aa14.07□□□□□ -0.16
LINC00578-204ENST00000446548 TNIKQ9UKE5 1360 aa14.07□□□□□ -0.16
LINC00578-204ENST00000446548 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
LINC00578-204ENST00000446548 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
LINC00578-204ENST00000446548 ABCA10Q8WWZ4 1543 aa14.06□□□□□ -0.16
LINC00578-204ENST00000446548 CHADLQ6NUI6 762 aa14.06□□□□□ -0.16
LINC00578-204ENST00000446548 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
LINC00578-204ENST00000446548 RAPGEF2Q9Y4G8 1499 aa14.06□□□□□ -0.16
LINC00578-204ENST00000446548 PLEKHG5O94827 1062 aa14.04□□□□□ -0.16
LINC00578-204ENST00000446548 MRC2Q9UBG0 1479 aa14.04□□□□□ -0.16
LINC00578-204ENST00000446548 TARBP1Q13395 1621 aaKnown RBP14.02□□□□□ -0.16
LINC00578-204ENST00000446548 CEP162Q5TB80 1403 aa14.01□□□□□ -0.17
LINC00578-204ENST00000446548 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
LINC00578-204ENST00000446548 ABCA5Q8WWZ7 1642 aa14.01□□□□□ -0.17
LINC00578-204ENST00000446548 WDR62O43379 1518 aa14□□□□□ -0.17
LINC00578-204ENST00000446548 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
LINC00578-204ENST00000446548 MIER1Q8N108 512 aa13.99□□□□□ -0.17
LINC00578-204ENST00000446548 IGF1RP08069 1367 aa13.97□□□□□ -0.17
LINC00578-204ENST00000446548 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
LINC00578-204ENST00000446548 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
LINC00578-204ENST00000446548 CUL7Q14999 1698 aa13.95□□□□□ -0.18
LINC00578-204ENST00000446548 UBTFP17480 764 aaKnown RBP13.94□□□□□ -0.18
LINC00578-204ENST00000446548 PBRM1Q86U86 1689 aa13.92□□□□□ -0.18
LINC00578-204ENST00000446548 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
LINC00578-204ENST00000446548 CARMIL1Q5VZK9 1371 aa13.89□□□□□ -0.19
LINC00578-204ENST00000446548 HAX1O00165 279 aa13.89□□□□□ -0.19
LINC00578-204ENST00000446548 NPM1P06748 294 aaKnown RBP eCLIP13.89□□□□□ -0.19
LINC00578-204ENST00000446548 GAPVD1Q14C86 1478 aa13.88□□□□□ -0.19
LINC00578-204ENST00000446548 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
LINC00578-204ENST00000446548 ZBTB47Q9UFB7 747 aaPredicted RBP13.87□□□□□ -0.19
LINC00578-204ENST00000446548 CLIP1P30622 1438 aa13.87□□□□□ -0.19
LINC00578-204ENST00000446548 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
LINC00578-204ENST00000446548 CTTNBP2Q8WZ74 1663 aa13.85□□□□□ -0.19
LINC00578-204ENST00000446548 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
LINC00578-204ENST00000446548 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
LINC00578-204ENST00000446548 ADAMTS12P58397 1594 aa13.81□□□□□ -0.2
LINC00578-204ENST00000446548 MNX1P50219 401 aaPredicted RBP13.81□□□□□ -0.2
LINC00578-204ENST00000446548 ARAP1Q96P48 1450 aa13.8□□□□□ -0.2
LINC00578-204ENST00000446548 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
LINC00578-204ENST00000446548 AQRO60306 1485 aaKnown RBP eCLIP13.79□□□□□ -0.2
LINC00578-204ENST00000446548 VPS8Q8N3P4 1428 aa13.78□□□□□ -0.2
LINC00578-204ENST00000446548 C19orf67A6NJJ6 358 aa13.77□□□□□ -0.21
LINC00578-204ENST00000446548 ARHGAP35Q9NRY4 1499 aa13.77□□□□□ -0.21
LINC00578-204ENST00000446548 GRIN2BQ13224 1484 aa13.76□□□□□ -0.21
LINC00578-204ENST00000446548 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
LINC00578-204ENST00000446548 KLHL34Q8N239 644 aa13.74□□□□□ -0.21
LINC00578-204ENST00000446548 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
LINC00578-204ENST00000446548 FHAD1B1AJZ9 1412 aa13.73□□□□□ -0.21
LINC00578-204ENST00000446548 TRIM26Q12899 539 aaPredicted RBP13.71□□□□□ -0.21
LINC00578-204ENST00000446548 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
LINC00578-204ENST00000446548 SNAPC4Q5SXM2 1469 aa13.69□□□□□ -0.22
LINC00578-204ENST00000446548 RANGAP1P46060 587 aaPredicted RBP13.69□□□□□ -0.22
LINC00578-204ENST00000446548 EFCAB5A4FU69 1503 aa13.69□□□□□ -0.22
LINC00578-204ENST00000446548 SAMD9Q5K651 1589 aa13.68□□□□□ -0.22
LINC00578-204ENST00000446548 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
LINC00578-204ENST00000446548 MAGI1Q96QZ7 1491 aaPredicted RBP13.66□□□□□ -0.22
LINC00578-204ENST00000446548 ZRANB1Q9UGI0 708 aa13.64□□□□□ -0.23
LINC00578-204ENST00000446548 EVX2Q03828 476 aa13.63□□□□□ -0.23
LINC00578-204ENST00000446548 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
LINC00578-204ENST00000446548 IQGAP2Q13576 1575 aa13.62□□□□□ -0.23
LINC00578-204ENST00000446548 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
LINC00578-204ENST00000446548 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
LINC00578-204ENST00000446548 PCF11O94913 1555 aaKnown RBP13.62□□□□□ -0.23
LINC00578-204ENST00000446548 SYNJ2O15056 1496 aa13.6□□□□□ -0.23
LINC00578-204ENST00000446548 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms