RNA–Protein interactions for RNA: ENST00000443509.6

PRUNE2-208, Transcript of prune homolog 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRUNE2, Length 12,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-208ENST00000443509 PABPN1Q86U42 306 aaKnown RBP eCLIP6.34□□□□□ -1.39
PRUNE2-208ENST00000443509 CCDC18Q5T9S5 1454 aa6.34□□□□□ -1.39
PRUNE2-208ENST00000443509 HNRNPUL2Q1KMD3 747 aaKnown RBP6.33□□□□□ -1.4
PRUNE2-208ENST00000443509 ARID4BQ4LE39 1312 aaPredicted RBP6.33□□□□□ -1.4
PRUNE2-208ENST00000443509 MAP3K1Q13233 1512 aa6.33□□□□□ -1.4
PRUNE2-208ENST00000443509 PTMSP20962 102 aa6.33□□□□□ -1.4
PRUNE2-208ENST00000443509 FAM50AQ14320 339 aaKnown RBP6.32□□□□□ -1.4
PRUNE2-208ENST00000443509 WDR97A6NE52 1622 aa6.32□□□□□ -1.4
PRUNE2-208ENST00000443509 THOC2Q8NI27 1593 aaKnown RBP6.32□□□□□ -1.4
PRUNE2-208ENST00000443509 EIF4G1Q04637 1599 aaKnown RBP6.32□□□□□ -1.4
PRUNE2-208ENST00000443509 RAPGEF2Q9Y4G8 1499 aa6.32□□□□□ -1.4
PRUNE2-208ENST00000443509 CCNB3Q8WWL7 1395 aa6.31□□□□□ -1.4
PRUNE2-208ENST00000443509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.31□□□□□ -1.4
PRUNE2-208ENST00000443509 LAMC3Q9Y6N6 1575 aa6.29□□□□□ -1.4
PRUNE2-208ENST00000443509 FYCO1Q9BQS8 1478 aa6.29□□□□□ -1.4
PRUNE2-208ENST00000443509 SUPT6HQ7KZ85 1726 aaKnown RBP6.29□□□□□ -1.4
PRUNE2-208ENST00000443509 CTTNBP2Q8WZ74 1663 aa6.29□□□□□ -1.4
PRUNE2-208ENST00000443509 CUX2O14529 1486 aa6.28□□□□□ -1.4
PRUNE2-208ENST00000443509 CADPSQ9ULU8 1353 aa6.28□□□□□ -1.4
PRUNE2-208ENST00000443509 DNMBPQ6XZF7 1577 aa6.28□□□□□ -1.4
PRUNE2-208ENST00000443509 CFTRP13569 1480 aa6.28□□□□□ -1.4
PRUNE2-208ENST00000443509 HECW1Q76N89 1606 aa6.27□□□□□ -1.41
PRUNE2-208ENST00000443509 CARMIL2Q6F5E8 1435 aa6.27□□□□□ -1.41
PRUNE2-208ENST00000443509 CARMIL1Q5VZK9 1371 aa6.27□□□□□ -1.41
PRUNE2-208ENST00000443509 ZBTB47Q9UFB7 747 aaPredicted RBP6.27□□□□□ -1.41
PRUNE2-208ENST00000443509 SCAF1Q9H7N4 1312 aaKnown RBP6.26□□□□□ -1.41
PRUNE2-208ENST00000443509 AQRO60306 1485 aaKnown RBP eCLIP6.25□□□□□ -1.41
PRUNE2-208ENST00000443509 PPM1GO15355 546 aaPredicted RBP6.25□□□□□ -1.41
PRUNE2-208ENST00000443509 SETD5Q9C0A6 1442 aa6.24□□□□□ -1.41
PRUNE2-208ENST00000443509 CDCA8Q53HL2 280 aa6.24□□□□□ -1.41
PRUNE2-208ENST00000443509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.24□□□□□ -1.41
PRUNE2-208ENST00000443509 BICRAQ9NZM4 1560 aa6.24□□□□□ -1.41
PRUNE2-208ENST00000443509 NEFMP07197 916 aa6.24□□□□□ -1.41
PRUNE2-208ENST00000443509 DDRGK1Q96HY6 314 aa6.23□□□□□ -1.41
PRUNE2-208ENST00000443509 EHBP1L1Q8N3D4 1523 aa6.23□□□□□ -1.41
PRUNE2-208ENST00000443509 TRIM52Q96A61 297 aa6.23□□□□□ -1.41
PRUNE2-208ENST00000443509 ROCK2O75116 1388 aaKnown RBP6.23□□□□□ -1.41
PRUNE2-208ENST00000443509 RSPH6AQ9H0K4 717 aa6.23□□□□□ -1.41
PRUNE2-208ENST00000443509 ITSN2Q9NZM3 1697 aa6.23□□□□□ -1.41
PRUNE2-208ENST00000443509 SYNJ1O43426 1573 aa6.23□□□□□ -1.41
PRUNE2-208ENST00000443509 CFAP43Q8NDM7 1665 aa6.22□□□□□ -1.41
PRUNE2-208ENST00000443509 ERCC6Q03468 1493 aa6.22□□□□□ -1.41
PRUNE2-208ENST00000443509 RSPH4AQ5TD94 716 aa6.22□□□□□ -1.41
PRUNE2-208ENST00000443509 ITGAEP38570 1179 aa6.22□□□□□ -1.41
PRUNE2-208ENST00000443509 UPF2Q9HAU5 1272 aaKnown RBP6.21□□□□□ -1.41
PRUNE2-208ENST00000443509 SOGA1O94964 1423 aa6.21□□□□□ -1.41
PRUNE2-208ENST00000443509 FANCD2Q9BXW9 1451 aa6.21□□□□□ -1.42
PRUNE2-208ENST00000443509 PPARGC1BQ86YN6 1023 aaKnown RBP6.21□□□□□ -1.42
PRUNE2-208ENST00000443509 LAS1LQ9Y4W2 734 aaKnown RBP6.21□□□□□ -1.42
PRUNE2-208ENST00000443509 TIAM1Q13009 1591 aa6.21□□□□□ -1.42
PRUNE2-208ENST00000443509 CCER2I3L3R5 266 aa6.2□□□□□ -1.42
PRUNE2-208ENST00000443509 TSPY4P0CV99 314 aa6.19□□□□□ -1.42
PRUNE2-208ENST00000443509 TSPY10P0CW01 314 aa6.19□□□□□ -1.42
PRUNE2-208ENST00000443509 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.19□□□□□ -1.42
PRUNE2-208ENST00000443509 CASKIN1Q8WXD9 1431 aa6.19□□□□□ -1.42
PRUNE2-208ENST00000443509 PHLDB1Q86UU1 1377 aa6.19□□□□□ -1.42
PRUNE2-208ENST00000443509 EIF4G2P78344 907 aaKnown RBP eCLIP6.19□□□□□ -1.42
PRUNE2-208ENST00000443509 CNGB1Q14028 1251 aaPredicted RBP6.18□□□□□ -1.42
PRUNE2-208ENST00000443509 HSP90AA1P07900 732 aaKnown RBP6.18□□□□□ -1.42
PRUNE2-208ENST00000443509 KTN1Q86UP2 1357 aaKnown RBP6.18□□□□□ -1.42
PRUNE2-208ENST00000443509 PRKCSHP14314 528 aaPredicted RBP6.18□□□□□ -1.42
PRUNE2-208ENST00000443509 PRXQ9BXM0 1461 aa6.18□□□□□ -1.42
PRUNE2-208ENST00000443509 STAC3Q96MF2 364 aa6.17□□□□□ -1.42
PRUNE2-208ENST00000443509 RRBP1Q9P2E9 1410 aaKnown RBP6.17□□□□□ -1.42
PRUNE2-208ENST00000443509 FGD5Q6ZNL6 1462 aa6.17□□□□□ -1.42
PRUNE2-208ENST00000443509 SCAPERQ9BY12 1400 aa6.17□□□□□ -1.42
PRUNE2-208ENST00000443509 ABCA10Q8WWZ4 1543 aa6.17□□□□□ -1.42
PRUNE2-208ENST00000443509 CALRP27797 417 aaKnown RBP6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 EIF3AQ14152 1382 aaKnown RBP6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 NEUROD1Q13562 356 aa6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 KANK1Q14678 1352 aa6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 GAPVD1Q14C86 1478 aa6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 UACAQ9BZF9 1416 aa6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 CHMP4BQ9H444 224 aaKnown RBP6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 PODXL2Q9NZ53 605 aa6.16□□□□□ -1.42
PRUNE2-208ENST00000443509 L1TD1Q5T7N2 865 aaKnown RBP6.15□□□□□ -1.42
PRUNE2-208ENST00000443509 PLEKHD1A6NEE1 506 aa6.15□□□□□ -1.42
PRUNE2-208ENST00000443509 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.42
PRUNE2-208ENST00000443509 PLEKHH2Q8IVE3 1493 aa6.15□□□□□ -1.42
PRUNE2-208ENST00000443509 CHMP7Q8WUX9 453 aaPredicted RBP6.15□□□□□ -1.43
PRUNE2-208ENST00000443509 NESP48681 1621 aa6.15□□□□□ -1.43
PRUNE2-208ENST00000443509 LRRC9Q6ZRR7 1453 aa6.15□□□□□ -1.43
PRUNE2-208ENST00000443509 MIA2Q96PC5 1412 aa6.15□□□□□ -1.43
PRUNE2-208ENST00000443509 AKNAQ7Z591 1439 aa6.14□□□□□ -1.43
PRUNE2-208ENST00000443509 MYOM3Q5VTT5 1437 aa6.14□□□□□ -1.43
PRUNE2-208ENST00000443509 IQGAP2Q13576 1575 aa6.14□□□□□ -1.43
PRUNE2-208ENST00000443509 GRIN2BQ13224 1484 aa6.14□□□□□ -1.43
PRUNE2-208ENST00000443509 ANKRD30AQ9BXX3 1397 aa6.14□□□□□ -1.43
PRUNE2-208ENST00000443509 USP35Q9P2H5 1018 aa6.13□□□□□ -1.43
PRUNE2-208ENST00000443509 BECN1Q14457 450 aa6.13□□□□□ -1.43
PRUNE2-208ENST00000443509 NGEFQ8N5V2 710 aa6.13□□□□□ -1.43
PRUNE2-208ENST00000443509 PKNOX2Q96KN3 472 aa6.13□□□□□ -1.43
PRUNE2-208ENST00000443509 CFAP44Q96MT7 982 aa6.13□□□□□ -1.43
PRUNE2-208ENST00000443509 NAP1L5Q96NT1 182 aaPredicted RBP6.13□□□□□ -1.43
PRUNE2-208ENST00000443509 IFT140Q96RY7 1462 aa6.13□□□□□ -1.43
PRUNE2-208ENST00000443509 NPM1P06748 294 aaKnown RBP eCLIP6.12□□□□□ -1.43
PRUNE2-208ENST00000443509 MRC2Q9UBG0 1479 aa6.12□□□□□ -1.43
PRUNE2-208ENST00000443509 FKBP8Q14318 412 aa6.12□□□□□ -1.43
PRUNE2-208ENST00000443509 CFDP1Q9UEE9 299 aaPredicted RBP6.11□□□□□ -1.43
PRUNE2-208ENST00000443509 A0A0U1RQG5 324 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms