RNA–Protein interactions for RNA: ENST00000443509.6

PRUNE2-208, Transcript of prune homolog 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRUNE2, Length 12,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-208ENST00000443509 NISCHQ9Y2I1 1504 aa8.63□□□□□ -1.03
PRUNE2-208ENST00000443509 MYT1Q01538 1121 aa8.19□□□□□ -1.1
PRUNE2-208ENST00000443509 PELP1Q8IZL8 1130 aaKnown RBP8.01□□□□□ -1.13
PRUNE2-208ENST00000443509 CCDC180Q9P1Z9 1646 aa7.72□□□□□ -1.17
PRUNE2-208ENST00000443509 TTBK1Q5TCY1 1321 aaPredicted RBP7.64□□□□□ -1.19
PRUNE2-208ENST00000443509 DCAF8L2P0C7V8 631 aa7.36□□□□□ -1.23
PRUNE2-208ENST00000443509 ERICH6Q7L0X2 663 aa7.34□□□□□ -1.23
PRUNE2-208ENST00000443509 CCER1Q8TC90 406 aaPredicted RBP7.33□□□□□ -1.24
PRUNE2-208ENST00000443509 YTHDC1Q96MU7 727 aaKnown RBP7.28□□□□□ -1.24
PRUNE2-208ENST00000443509 DCAF1Q9Y4B6 1507 aa7.28□□□□□ -1.24
PRUNE2-208ENST00000443509 CENPBP07199 599 aaPredicted RBP7.27□□□□□ -1.25
PRUNE2-208ENST00000443509 ZCCHC6Q5VYS8 1495 aaKnown RBP7.26□□□□□ -1.25
PRUNE2-208ENST00000443509 ZEB1P37275 1124 aaPredicted RBP7.24□□□□□ -1.25
PRUNE2-208ENST00000443509 SUPT5HO00267 1087 aaKnown RBP7.22□□□□□ -1.25
PRUNE2-208ENST00000443509 MYO15BQ96JP2 1530 aa7.17□□□□□ -1.26
PRUNE2-208ENST00000443509 SHROOM4Q9ULL8 1493 aa7.15□□□□□ -1.26
PRUNE2-208ENST00000443509 NACADO15069 1562 aa7.13□□□□□ -1.27
PRUNE2-208ENST00000443509 FAM9AQ8IZU1 332 aaPredicted RBP7.11□□□□□ -1.27
PRUNE2-208ENST00000443509 APLP2Q06481 763 aa7.08□□□□□ -1.28
PRUNE2-208ENST00000443509 RB1CC1Q8TDY2 1594 aa7.05□□□□□ -1.28
PRUNE2-208ENST00000443509 TRIM41Q8WV44 630 aa6.98□□□□□ -1.29
PRUNE2-208ENST00000443509 ABCC9O60706 1549 aa6.95□□□□□ -1.3
PRUNE2-208ENST00000443509 GLIPR1L2Q4G1C9 344 aa6.94□□□□□ -1.3
PRUNE2-208ENST00000443509 MYT1LQ9UL68 1186 aa6.94□□□□□ -1.3
PRUNE2-208ENST00000443509 TRIM26Q12899 539 aaPredicted RBP6.91□□□□□ -1.3
PRUNE2-208ENST00000443509 EEA1Q15075 1411 aa6.89□□□□□ -1.31
PRUNE2-208ENST00000443509 NEFLP07196 543 aa6.89□□□□□ -1.31
PRUNE2-208ENST00000443509 SCRIBQ14160 1630 aa6.89□□□□□ -1.31
PRUNE2-208ENST00000443509 BAZ1AQ9NRL2 1556 aaPredicted RBP6.89□□□□□ -1.31
PRUNE2-208ENST00000443509 RANGAP1P46060 587 aaPredicted RBP6.85□□□□□ -1.31
PRUNE2-208ENST00000443509 ACIN1Q9UKV3 1341 aaKnown RBP6.84□□□□□ -1.31
PRUNE2-208ENST00000443509 CHIC1Q5VXU3 224 aa6.83□□□□□ -1.32
PRUNE2-208ENST00000443509 CLSPNQ9HAW4 1339 aa6.82□□□□□ -1.32
PRUNE2-208ENST00000443509 HRCP23327 699 aa6.8□□□□□ -1.32
PRUNE2-208ENST00000443509 PCGF6Q9BYE7 350 aa6.79□□□□□ -1.32
PRUNE2-208ENST00000443509 RTL5Q5HYW3 569 aaPredicted RBP6.79□□□□□ -1.32
PRUNE2-208ENST00000443509 SMARCA2P51531 1590 aa6.77□□□□□ -1.33
PRUNE2-208ENST00000443509 UBTFP17480 764 aaKnown RBP6.74□□□□□ -1.33
PRUNE2-208ENST00000443509 DAXXQ9UER7 740 aaPredicted RBP6.72□□□□□ -1.33
PRUNE2-208ENST00000443509 TOP2AP11388 1531 aaKnown RBP6.69□□□□□ -1.34
PRUNE2-208ENST00000443509 RSF1Q96T23 1441 aaPredicted RBP6.67□□□□□ -1.34
PRUNE2-208ENST00000443509 SMARCA4P51532 1647 aa6.65□□□□□ -1.34
PRUNE2-208ENST00000443509 GOLGA3Q08378 1498 aa6.65□□□□□ -1.35
PRUNE2-208ENST00000443509 CEP164Q9UPV0 1460 aa6.64□□□□□ -1.35
PRUNE2-208ENST00000443509 BAZ1BQ9UIG0 1483 aaKnown RBP6.64□□□□□ -1.35
PRUNE2-208ENST00000443509 SLC24A1O60721 1099 aa6.63□□□□□ -1.35
PRUNE2-208ENST00000443509 EHMT2Q96KQ7 1210 aa6.57□□□□□ -1.36
PRUNE2-208ENST00000443509 WRNQ14191 1432 aaPredicted RBP eCLIP6.56□□□□□ -1.36
PRUNE2-208ENST00000443509 TNIKQ9UKE5 1360 aa6.55□□□□□ -1.36
PRUNE2-208ENST00000443509 PRDM2Q13029 1718 aa6.55□□□□□ -1.36
PRUNE2-208ENST00000443509 NCLP19338 710 aaKnown RBP6.55□□□□□ -1.36
PRUNE2-208ENST00000443509 CSRNP3Q8WYN3 585 aa6.55□□□□□ -1.36
PRUNE2-208ENST00000443509 FHAD1B1AJZ9 1412 aa6.55□□□□□ -1.36
PRUNE2-208ENST00000443509 KIF27Q86VH2 1401 aa6.55□□□□□ -1.36
PRUNE2-208ENST00000443509 ZNF316A6NFI3 1004 aaPredicted RBP6.54□□□□□ -1.36
PRUNE2-208ENST00000443509 ABCC8Q09428 1581 aa6.54□□□□□ -1.36
PRUNE2-208ENST00000443509 CLIP1P30622 1438 aa6.53□□□□□ -1.36
PRUNE2-208ENST00000443509 WIZO95785 1651 aa6.52□□□□□ -1.37
PRUNE2-208ENST00000443509 KIF21BO75037 1637 aa6.52□□□□□ -1.37
PRUNE2-208ENST00000443509 HMGXB3Q12766 1538 aa6.51□□□□□ -1.37
PRUNE2-208ENST00000443509 PEG3Q9GZU2 1588 aa6.51□□□□□ -1.37
PRUNE2-208ENST00000443509 EIF5BO60841 1220 aaKnown RBP6.51□□□□□ -1.37
PRUNE2-208ENST00000443509 GTF3C3Q9Y5Q9 886 aa6.5□□□□□ -1.37
PRUNE2-208ENST00000443509 CDK11AQ9UQ88 783 aaPredicted RBP6.5□□□□□ -1.37
PRUNE2-208ENST00000443509 TNNT2P45379 298 aaPredicted RBP6.5□□□□□ -1.37
PRUNE2-208ENST00000443509 UNC13AQ9UPW8 1703 aa6.49□□□□□ -1.37
PRUNE2-208ENST00000443509 CEP162Q5TB80 1403 aa6.49□□□□□ -1.37
PRUNE2-208ENST00000443509 ERICH3Q5RHP9 1530 aa6.49□□□□□ -1.37
PRUNE2-208ENST00000443509 MROH2BQ7Z745 1585 aa6.48□□□□□ -1.37
PRUNE2-208ENST00000443509 DIEXFQ68CQ4 756 aaKnown RBP6.48□□□□□ -1.37
PRUNE2-208ENST00000443509 TRIM44Q96DX7 344 aaPredicted RBP6.46□□□□□ -1.38
PRUNE2-208ENST00000443509 ANP32EQ9BTT0 268 aa6.45□□□□□ -1.38
PRUNE2-208ENST00000443509 TIMELESSQ9UNS1 1208 aa6.45□□□□□ -1.38
PRUNE2-208ENST00000443509 ANP32AP39687 249 aaKnown RBP6.45□□□□□ -1.38
PRUNE2-208ENST00000443509 BCL11AQ9H165 835 aa6.45□□□□□ -1.38
PRUNE2-208ENST00000443509 VPS8Q8N3P4 1428 aa6.44□□□□□ -1.38
PRUNE2-208ENST00000443509 ANP32BQ92688 251 aaKnown RBP6.43□□□□□ -1.38
PRUNE2-208ENST00000443509 ZNF326Q5BKZ1 582 aaKnown RBP6.43□□□□□ -1.38
PRUNE2-208ENST00000443509 CCDC88BA6NC98 1476 aa6.43□□□□□ -1.38
PRUNE2-208ENST00000443509 LOC105371045A0A1W2PR82 267 aa6.43□□□□□ -1.38
PRUNE2-208ENST00000443509 POLR3GLQ9BT43 218 aa6.42□□□□□ -1.38
PRUNE2-208ENST00000443509 ERICH6BQ5W0A0 696 aa6.42□□□□□ -1.38
PRUNE2-208ENST00000443509 FMN1Q68DA7 1419 aa6.41□□□□□ -1.38
PRUNE2-208ENST00000443509 KIF21AQ7Z4S6 1674 aa6.41□□□□□ -1.38
PRUNE2-208ENST00000443509 TOP2BQ02880 1626 aa6.4□□□□□ -1.38
PRUNE2-208ENST00000443509 CUL7Q14999 1698 aa6.4□□□□□ -1.39
PRUNE2-208ENST00000443509 CUX1P39880 1505 aa6.4□□□□□ -1.39
PRUNE2-208ENST00000443509 ATP1B4Q9UN42 357 aaPredicted RBP6.4□□□□□ -1.39
PRUNE2-208ENST00000443509 EFCAB5A4FU69 1503 aa6.39□□□□□ -1.39
PRUNE2-208ENST00000443509 CECR2Q9BXF3 1484 aa6.39□□□□□ -1.39
PRUNE2-208ENST00000443509 PDS5BQ9NTI5 1447 aa6.38□□□□□ -1.39
PRUNE2-208ENST00000443509 ATAD2BQ9ULI0 1458 aa6.37□□□□□ -1.39
PRUNE2-208ENST00000443509 ANP32CO43423 234 aa6.37□□□□□ -1.39
PRUNE2-208ENST00000443509 BIVM-ERCC5R4GMW8 1640 aa6.37□□□□□ -1.39
PRUNE2-208ENST00000443509 TONSLQ96HA7 1378 aa6.36□□□□□ -1.39
PRUNE2-208ENST00000443509 CC2D2AQ9P2K1 1620 aa6.36□□□□□ -1.39
PRUNE2-208ENST00000443509 NCAPD3P42695 1498 aa6.35□□□□□ -1.39
PRUNE2-208ENST00000443509 CDK11BP21127 795 aaKnown RBP6.35□□□□□ -1.39
PRUNE2-208ENST00000443509 ARHGAP35Q9NRY4 1499 aa6.35□□□□□ -1.39
PRUNE2-208ENST00000443509 MTUS2Q5JR59 1369 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms