RNA–Protein interactions for RNA: ENST00000442328.1

SYNJ2-IT1-201, SYNJ2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SYNJ2-IT1, Length 599 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2-IT1-201ENST00000442328 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 ABCA5Q8WWZ7 1642 aa12.19□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 PRXQ9BXM0 1461 aa12.16□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 KIF21BO75037 1637 aa12.16□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 GOLGA3Q08378 1498 aa12.15□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 MYCNP04198 464 aaPredicted RBP12.15□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 CARMIL1Q5VZK9 1371 aa12.15□□□□□ -0.46
SYNJ2-IT1-201ENST00000442328 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 ILDR1Q86SU0 546 aaPredicted RBP12.14□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 GRIN2BQ13224 1484 aa12.13□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 PBRM1Q86U86 1689 aa12.11□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 CUL7Q14999 1698 aa12.1□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 TNIKQ9UKE5 1360 aa12.09□□□□□ -0.47
SYNJ2-IT1-201ENST00000442328 FHAD1B1AJZ9 1412 aa12.06□□□□□ -0.48
SYNJ2-IT1-201ENST00000442328 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
SYNJ2-IT1-201ENST00000442328 ADAMTS12P58397 1594 aa12.05□□□□□ -0.48
SYNJ2-IT1-201ENST00000442328 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
SYNJ2-IT1-201ENST00000442328 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
SYNJ2-IT1-201ENST00000442328 RANGAP1P46060 587 aaPredicted RBP12.02□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 FBLN2P98095 1184 aa12.01□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 CHMP7Q8WUX9 453 aaPredicted RBP12.01□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 SYNJ2O15056 1496 aa12□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 CLIP1P30622 1438 aa11.97□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.97□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 OSCARQ8IYS5 282 aa11.97□□□□□ -0.49
SYNJ2-IT1-201ENST00000442328 RIMBP3CA6NJZ7 1639 aa11.95□□□□□ -0.5
SYNJ2-IT1-201ENST00000442328 RIMBP3BA6NNM3 1639 aa11.95□□□□□ -0.5
SYNJ2-IT1-201ENST00000442328 RIMBP3Q9UFD9 1639 aa11.95□□□□□ -0.5
SYNJ2-IT1-201ENST00000442328 CTTNBP2Q8WZ74 1663 aa11.94□□□□□ -0.5
SYNJ2-IT1-201ENST00000442328 SAMD1Q6SPF0 538 aaPredicted RBP11.91□□□□□ -0.5
SYNJ2-IT1-201ENST00000442328 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
SYNJ2-IT1-201ENST00000442328 CHD1O14646 1710 aa11.89□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 CEP170Q5SW79 1584 aa11.89□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 NUP160Q12769 1436 aa11.89□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 P3H3Q8IVL6 736 aa11.88□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 ARAP1Q96P48 1450 aa11.86□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 EFCAB5A4FU69 1503 aa11.84□□□□□ -0.51
SYNJ2-IT1-201ENST00000442328 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 FHOD3Q2V2M9 1422 aa11.82□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 SAMD9Q5K651 1589 aa11.82□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 APLP2Q06481 763 aa11.79□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 ARHGEF11O15085 1522 aa11.79□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 DISP1Q96F81 1524 aa11.78□□□□□ -0.52
SYNJ2-IT1-201ENST00000442328 CARMIL2Q6F5E8 1435 aa11.77□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 CLASP1Q7Z460 1538 aa11.76□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 KIAA0556O60303 1618 aa11.76□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 PPARGC1BQ86YN6 1023 aaKnown RBP11.76□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 PRG4Q92954 1404 aaPredicted RBP11.76□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 SHROOM2Q13796 1616 aa11.73□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 CASKIN1Q8WXD9 1431 aa11.71□□□□□ -0.53
SYNJ2-IT1-201ENST00000442328 PCF11O94913 1555 aaKnown RBP11.71□□□□□ -0.54
SYNJ2-IT1-201ENST00000442328 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
SYNJ2-IT1-201ENST00000442328 FYCO1Q9BQS8 1478 aa11.69□□□□□ -0.54
SYNJ2-IT1-201ENST00000442328 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
SYNJ2-IT1-201ENST00000442328 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
SYNJ2-IT1-201ENST00000442328 PTPRGP23470 1445 aa11.68□□□□□ -0.54
SYNJ2-IT1-201ENST00000442328 KANK4Q5T7N3 995 aaPredicted RBP11.65□□□□□ -0.54
SYNJ2-IT1-201ENST00000442328 PLB1Q6P1J6 1458 aa11.64□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 ARID3CA6NKF2 412 aa11.64□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 HECW1Q76N89 1606 aa11.64□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 TIAM1Q13009 1591 aa11.63□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 MAP3K1Q13233 1512 aa11.63□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 RAPGEF6Q8TEU7 1601 aa11.63□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 EPRSP07814 1512 aaKnown RBP11.61□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 NUP153P49790 1475 aaKnown RBP11.61□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 ABCA8O94911 1581 aa11.61□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 CFAP43Q8NDM7 1665 aa11.6□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 CCDC18Q5T9S5 1454 aa11.6□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 LRRC9Q6ZRR7 1453 aa11.59□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 UACAQ9BZF9 1416 aa11.59□□□□□ -0.55
SYNJ2-IT1-201ENST00000442328 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 MTUS2Q5JR59 1369 aa11.56□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 ZNF219Q9P2Y4 722 aaPredicted RBP11.56□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 PCGF6Q9BYE7 350 aa11.55□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 CDK11AQ9UQ88 783 aaPredicted RBP11.55□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 ATP10BO94823 1461 aa11.55□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 UHRF1BP1LA0JNW5 1464 aa11.53□□□□□ -0.56
SYNJ2-IT1-201ENST00000442328 C1QBPQ07021 282 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms