RNA–Protein interactions for RNA: ENST00000442328.1

SYNJ2-IT1-201, SYNJ2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SYNJ2-IT1, Length 599 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2-IT1-201ENST00000442328 AEBP2Q6ZN18 517 aaPredicted RBP18.77■□□□□ 0.6
SYNJ2-IT1-201ENST00000442328 CHIC1Q5VXU3 224 aa18.72■□□□□ 0.59
SYNJ2-IT1-201ENST00000442328 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
SYNJ2-IT1-201ENST00000442328 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
SYNJ2-IT1-201ENST00000442328 SENP3Q9H4L4 574 aaPredicted RBP16.01■□□□□ 0.15
SYNJ2-IT1-201ENST00000442328 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
SYNJ2-IT1-201ENST00000442328 CCDC180Q9P1Z9 1646 aa15.15■□□□□ 0.02
SYNJ2-IT1-201ENST00000442328 FOXD1Q16676 465 aa14.73□□□□□ -0.05
SYNJ2-IT1-201ENST00000442328 ABCC9O60706 1549 aa14.52□□□□□ -0.08
SYNJ2-IT1-201ENST00000442328 ZCCHC6Q5VYS8 1495 aaKnown RBP14.5□□□□□ -0.09
SYNJ2-IT1-201ENST00000442328 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
SYNJ2-IT1-201ENST00000442328 ADRA2BP18089 450 aa14.41□□□□□ -0.1
SYNJ2-IT1-201ENST00000442328 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
SYNJ2-IT1-201ENST00000442328 DCAF1Q9Y4B6 1507 aa14.3□□□□□ -0.12
SYNJ2-IT1-201ENST00000442328 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
SYNJ2-IT1-201ENST00000442328 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
SYNJ2-IT1-201ENST00000442328 NACADO15069 1562 aa14.17□□□□□ -0.14
SYNJ2-IT1-201ENST00000442328 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
SYNJ2-IT1-201ENST00000442328 SHROOM4Q9ULL8 1493 aa14.06□□□□□ -0.16
SYNJ2-IT1-201ENST00000442328 PIAS4Q8N2W9 510 aaPredicted RBP14.03□□□□□ -0.16
SYNJ2-IT1-201ENST00000442328 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
SYNJ2-IT1-201ENST00000442328 SCRIBQ14160 1630 aa13.93□□□□□ -0.18
SYNJ2-IT1-201ENST00000442328 UNC13AQ9UPW8 1703 aa13.76□□□□□ -0.21
SYNJ2-IT1-201ENST00000442328 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
SYNJ2-IT1-201ENST00000442328 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
SYNJ2-IT1-201ENST00000442328 KCNA4P22459 653 aa13.57□□□□□ -0.24
SYNJ2-IT1-201ENST00000442328 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
SYNJ2-IT1-201ENST00000442328 MSH5O43196 834 aa13.56□□□□□ -0.24
SYNJ2-IT1-201ENST00000442328 CECR2Q9BXF3 1484 aa13.48□□□□□ -0.25
SYNJ2-IT1-201ENST00000442328 SUPT5HO00267 1087 aaKnown RBP13.45□□□□□ -0.26
SYNJ2-IT1-201ENST00000442328 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
SYNJ2-IT1-201ENST00000442328 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
SYNJ2-IT1-201ENST00000442328 RSF1Q96T23 1441 aaPredicted RBP13.38□□□□□ -0.27
SYNJ2-IT1-201ENST00000442328 MROH2BQ7Z745 1585 aa13.37□□□□□ -0.27
SYNJ2-IT1-201ENST00000442328 SMARCA4P51532 1647 aa13.34□□□□□ -0.27
SYNJ2-IT1-201ENST00000442328 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
SYNJ2-IT1-201ENST00000442328 EIF4G1Q04637 1599 aaKnown RBP13.27□□□□□ -0.29
SYNJ2-IT1-201ENST00000442328 WIZO95785 1651 aa13.25□□□□□ -0.29
SYNJ2-IT1-201ENST00000442328 ATAD2BQ9ULI0 1458 aa13.17□□□□□ -0.3
SYNJ2-IT1-201ENST00000442328 PEG3Q9GZU2 1588 aa13.17□□□□□ -0.3
SYNJ2-IT1-201ENST00000442328 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
SYNJ2-IT1-201ENST00000442328 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
SYNJ2-IT1-201ENST00000442328 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
SYNJ2-IT1-201ENST00000442328 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
SYNJ2-IT1-201ENST00000442328 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
SYNJ2-IT1-201ENST00000442328 NPM3O75607 178 aaKnown RBP13.09□□□□□ -0.31
SYNJ2-IT1-201ENST00000442328 NCAPD3P42695 1498 aa13.09□□□□□ -0.31
SYNJ2-IT1-201ENST00000442328 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
SYNJ2-IT1-201ENST00000442328 HMGXB3Q12766 1538 aa13.03□□□□□ -0.32
SYNJ2-IT1-201ENST00000442328 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
SYNJ2-IT1-201ENST00000442328 CCDC88BA6NC98 1476 aa12.99□□□□□ -0.33
SYNJ2-IT1-201ENST00000442328 MAPK8IP2Q13387 824 aaPredicted RBP12.96□□□□□ -0.33
SYNJ2-IT1-201ENST00000442328 TRIM41Q8WV44 630 aa12.88□□□□□ -0.35
SYNJ2-IT1-201ENST00000442328 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
SYNJ2-IT1-201ENST00000442328 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
SYNJ2-IT1-201ENST00000442328 CUX2O14529 1486 aa12.77□□□□□ -0.37
SYNJ2-IT1-201ENST00000442328 CFTRP13569 1480 aa12.75□□□□□ -0.37
SYNJ2-IT1-201ENST00000442328 CADPSQ9ULU8 1353 aa12.75□□□□□ -0.37
SYNJ2-IT1-201ENST00000442328 NESP48681 1621 aa12.69□□□□□ -0.38
SYNJ2-IT1-201ENST00000442328 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
SYNJ2-IT1-201ENST00000442328 ABCC8Q09428 1581 aa12.66□□□□□ -0.38
SYNJ2-IT1-201ENST00000442328 LAMC3Q9Y6N6 1575 aa12.66□□□□□ -0.38
SYNJ2-IT1-201ENST00000442328 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
SYNJ2-IT1-201ENST00000442328 PRDM2Q13029 1718 aa12.62□□□□□ -0.39
SYNJ2-IT1-201ENST00000442328 WRNQ14191 1432 aaPredicted RBP eCLIP12.61□□□□□ -0.39
SYNJ2-IT1-201ENST00000442328 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
SYNJ2-IT1-201ENST00000442328 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
SYNJ2-IT1-201ENST00000442328 SYNJ1O43426 1573 aa12.54□□□□□ -0.4
SYNJ2-IT1-201ENST00000442328 CEP164Q9UPV0 1460 aa12.53□□□□□ -0.4
SYNJ2-IT1-201ENST00000442328 CUX1P39880 1505 aa12.51□□□□□ -0.41
SYNJ2-IT1-201ENST00000442328 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
SYNJ2-IT1-201ENST00000442328 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
SYNJ2-IT1-201ENST00000442328 BIVM-ERCC5R4GMW8 1640 aa12.48□□□□□ -0.41
SYNJ2-IT1-201ENST00000442328 ERCC6Q03468 1493 aa12.46□□□□□ -0.41
SYNJ2-IT1-201ENST00000442328 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
SYNJ2-IT1-201ENST00000442328 DNMBPQ6XZF7 1577 aa12.45□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 ZBTB22O15209 634 aa12.45□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 TOPBP1Q92547 1522 aa12.45□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 FGD5Q6ZNL6 1462 aa12.41□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 SOGA1O94964 1423 aa12.4□□□□□ -0.42
SYNJ2-IT1-201ENST00000442328 POLA1P09884 1462 aaPredicted RBP12.37□□□□□ -0.43
SYNJ2-IT1-201ENST00000442328 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
SYNJ2-IT1-201ENST00000442328 WDR62O43379 1518 aa12.36□□□□□ -0.43
SYNJ2-IT1-201ENST00000442328 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
SYNJ2-IT1-201ENST00000442328 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
SYNJ2-IT1-201ENST00000442328 EEA1Q15075 1411 aa12.33□□□□□ -0.44
SYNJ2-IT1-201ENST00000442328 KIF27Q86VH2 1401 aa12.3□□□□□ -0.44
SYNJ2-IT1-201ENST00000442328 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
SYNJ2-IT1-201ENST00000442328 ABCA10Q8WWZ4 1543 aa12.29□□□□□ -0.44
SYNJ2-IT1-201ENST00000442328 DCAF8L1A6NGE4 600 aa12.26□□□□□ -0.45
SYNJ2-IT1-201ENST00000442328 TDRD9Q8NDG6 1382 aaKnown RBP12.26□□□□□ -0.45
SYNJ2-IT1-201ENST00000442328 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
SYNJ2-IT1-201ENST00000442328 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
SYNJ2-IT1-201ENST00000442328 IFT140Q96RY7 1462 aa12.25□□□□□ -0.45
SYNJ2-IT1-201ENST00000442328 WDR97A6NE52 1622 aa12.23□□□□□ -0.45
SYNJ2-IT1-201ENST00000442328 IGF1RP08069 1367 aa12.21□□□□□ -0.45
SYNJ2-IT1-201ENST00000442328 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms