RNA–Protein interactions for RNA: ENST00000442019.6

CAGE1-204, Transcript of cancer antigen 1, humanhuman

TSL 1 (best)

Gene CAGE1, Length 2,832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-204ENST00000442019 PRXQ9BXM0 1461 aa10.33□□□□□ -0.76
CAGE1-204ENST00000442019 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
CAGE1-204ENST00000442019 URB2Q14146 1524 aaKnown RBP10.3□□□□□ -0.76
CAGE1-204ENST00000442019 DNMBPQ6XZF7 1577 aa10.27□□□□□ -0.76
CAGE1-204ENST00000442019 CCNB3Q8WWL7 1395 aa10.26□□□□□ -0.77
CAGE1-204ENST00000442019 RIMBP3CA6NJZ7 1639 aa10.26□□□□□ -0.77
CAGE1-204ENST00000442019 RIMBP3BA6NNM3 1639 aa10.26□□□□□ -0.77
CAGE1-204ENST00000442019 RIMBP3Q9UFD9 1639 aa10.26□□□□□ -0.77
CAGE1-204ENST00000442019 MAPKBP1O60336 1514 aa10.25□□□□□ -0.77
CAGE1-204ENST00000442019 TARBP1Q13395 1621 aaKnown RBP10.23□□□□□ -0.77
CAGE1-204ENST00000442019 TIMELESSQ9UNS1 1208 aa10.23□□□□□ -0.77
CAGE1-204ENST00000442019 BCL11AQ9H165 835 aa10.22□□□□□ -0.77
CAGE1-204ENST00000442019 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
CAGE1-204ENST00000442019 CCER2I3L3R5 266 aa10.2□□□□□ -0.78
CAGE1-204ENST00000442019 TOPBP1Q92547 1522 aa10.2□□□□□ -0.78
CAGE1-204ENST00000442019 EIF4G3O43432 1585 aaKnown RBP10.2□□□□□ -0.78
CAGE1-204ENST00000442019 TIAM1Q13009 1591 aa10.19□□□□□ -0.78
CAGE1-204ENST00000442019 ARHGAP35Q9NRY4 1499 aa10.18□□□□□ -0.78
CAGE1-204ENST00000442019 KIF27Q86VH2 1401 aa10.18□□□□□ -0.78
CAGE1-204ENST00000442019 RAB3GAP2Q9H2M9 1393 aa10.17□□□□□ -0.78
CAGE1-204ENST00000442019 CFAP43Q8NDM7 1665 aa10.17□□□□□ -0.78
CAGE1-204ENST00000442019 NEFLP07196 543 aa10.17□□□□□ -0.78
CAGE1-204ENST00000442019 KANK4Q5T7N3 995 aaPredicted RBP10.17□□□□□ -0.78
CAGE1-204ENST00000442019 SETD5Q9C0A6 1442 aa10.17□□□□□ -0.78
CAGE1-204ENST00000442019 ARHGEF11O15085 1522 aa10.17□□□□□ -0.78
CAGE1-204ENST00000442019 CLASP1Q7Z460 1538 aa10.16□□□□□ -0.78
CAGE1-204ENST00000442019 CHD1O14646 1710 aa10.14□□□□□ -0.79
CAGE1-204ENST00000442019 FKBP8Q14318 412 aa10.14□□□□□ -0.79
CAGE1-204ENST00000442019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.14□□□□□ -0.79
CAGE1-204ENST00000442019 CUX1P39880 1505 aa10.14□□□□□ -0.79
CAGE1-204ENST00000442019 PPP1R15AO75807 674 aaPredicted RBP10.13□□□□□ -0.79
CAGE1-204ENST00000442019 RBM19Q9Y4C8 960 aaKnown RBP10.13□□□□□ -0.79
CAGE1-204ENST00000442019 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
CAGE1-204ENST00000442019 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
CAGE1-204ENST00000442019 FANCIQ9NVI1 1328 aa10.11□□□□□ -0.79
CAGE1-204ENST00000442019 LRRC9Q6ZRR7 1453 aa10.11□□□□□ -0.79
CAGE1-204ENST00000442019 ERICH6BQ5W0A0 696 aa10.1□□□□□ -0.79
CAGE1-204ENST00000442019 FHAD1B1AJZ9 1412 aa10.09□□□□□ -0.79
CAGE1-204ENST00000442019 KCNH8Q96L42 1107 aa10.07□□□□□ -0.8
CAGE1-204ENST00000442019 ANP32CO43423 234 aa10.07□□□□□ -0.8
CAGE1-204ENST00000442019 BCANQ96GW7 911 aa10.05□□□□□ -0.8
CAGE1-204ENST00000442019 AQRO60306 1485 aaKnown RBP eCLIP10.05□□□□□ -0.8
CAGE1-204ENST00000442019 ZNF608Q9ULD9 1512 aaPredicted RBP10.04□□□□□ -0.8
CAGE1-204ENST00000442019 DDX10Q13206 875 aaKnown RBP10.04□□□□□ -0.8
CAGE1-204ENST00000442019 POLA1P09884 1462 aaPredicted RBP10.04□□□□□ -0.8
CAGE1-204ENST00000442019 EFCAB5A4FU69 1503 aa10.03□□□□□ -0.8
CAGE1-204ENST00000442019 FYCO1Q9BQS8 1478 aa10.03□□□□□ -0.8
CAGE1-204ENST00000442019 PBRM1Q86U86 1689 aa10.03□□□□□ -0.8
CAGE1-204ENST00000442019 PCF11O94913 1555 aaKnown RBP10.03□□□□□ -0.8
CAGE1-204ENST00000442019 RANGAP1P46060 587 aaPredicted RBP10.02□□□□□ -0.8
CAGE1-204ENST00000442019 PHLDB1Q86UU1 1377 aa10.02□□□□□ -0.8
CAGE1-204ENST00000442019 ABCA5Q8WWZ7 1642 aa10.02□□□□□ -0.81
CAGE1-204ENST00000442019 SHROOM2Q13796 1616 aa10.01□□□□□ -0.81
CAGE1-204ENST00000442019 SYNJ2O15056 1496 aa10.01□□□□□ -0.81
CAGE1-204ENST00000442019 GRIN2BQ13224 1484 aa10.01□□□□□ -0.81
CAGE1-204ENST00000442019 AEBP2Q6ZN18 517 aaPredicted RBP10□□□□□ -0.81
CAGE1-204ENST00000442019 CDK11AQ9UQ88 783 aaPredicted RBP9.99□□□□□ -0.81
CAGE1-204ENST00000442019 MSH5O43196 834 aa9.99□□□□□ -0.81
CAGE1-204ENST00000442019 IGF1RP08069 1367 aa9.98□□□□□ -0.81
CAGE1-204ENST00000442019 ABCA10Q8WWZ4 1543 aa9.98□□□□□ -0.81
CAGE1-204ENST00000442019 UACAQ9BZF9 1416 aa9.98□□□□□ -0.81
CAGE1-204ENST00000442019 FGD5Q6ZNL6 1462 aa9.98□□□□□ -0.81
CAGE1-204ENST00000442019 CASKIN1Q8WXD9 1431 aa9.97□□□□□ -0.81
CAGE1-204ENST00000442019 HFM1A2PYH4 1435 aa9.97□□□□□ -0.81
CAGE1-204ENST00000442019 PTPN23Q9H3S7 1636 aa9.96□□□□□ -0.81
CAGE1-204ENST00000442019 TONSLQ96HA7 1378 aa9.96□□□□□ -0.81
CAGE1-204ENST00000442019 NCOA2Q15596 1464 aa9.96□□□□□ -0.81
CAGE1-204ENST00000442019 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.81
CAGE1-204ENST00000442019 ERICH6Q7L0X2 663 aa9.96□□□□□ -0.82
CAGE1-204ENST00000442019 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.82
CAGE1-204ENST00000442019 KDM5BQ9UGL1 1544 aa9.95□□□□□ -0.82
CAGE1-204ENST00000442019 ITGAEP38570 1179 aa9.95□□□□□ -0.82
CAGE1-204ENST00000442019 CARMIL1Q5VZK9 1371 aa9.95□□□□□ -0.82
CAGE1-204ENST00000442019 TRIM52Q96A61 297 aa9.94□□□□□ -0.82
CAGE1-204ENST00000442019 CTTNBP2Q8WZ74 1663 aa9.94□□□□□ -0.82
CAGE1-204ENST00000442019 FGD6Q6ZV73 1430 aa9.93□□□□□ -0.82
CAGE1-204ENST00000442019 HECW1Q76N89 1606 aa9.93□□□□□ -0.82
CAGE1-204ENST00000442019 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
CAGE1-204ENST00000442019 CUL7Q14999 1698 aa9.93□□□□□ -0.82
CAGE1-204ENST00000442019 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
CAGE1-204ENST00000442019 GCC2Q8IWJ2 1684 aa9.92□□□□□ -0.82
CAGE1-204ENST00000442019 ADAMTS12P58397 1594 aa9.92□□□□□ -0.82
CAGE1-204ENST00000442019 POLR1AO95602 1720 aaPredicted RBP9.91□□□□□ -0.82
CAGE1-204ENST00000442019 NUP160Q12769 1436 aa9.91□□□□□ -0.82
CAGE1-204ENST00000442019 FAM50AQ14320 339 aaKnown RBP9.91□□□□□ -0.82
CAGE1-204ENST00000442019 AKNAQ7Z591 1439 aa9.9□□□□□ -0.82
CAGE1-204ENST00000442019 FMN1Q68DA7 1419 aa9.9□□□□□ -0.82
CAGE1-204ENST00000442019 CNTLNQ9NXG0 1405 aa9.9□□□□□ -0.82
CAGE1-204ENST00000442019 TRHP20396 242 aaPredicted RBP9.88□□□□□ -0.83
CAGE1-204ENST00000442019 HNRNPUQ00839 825 aaKnown RBP eCLIP9.88□□□□□ -0.83
CAGE1-204ENST00000442019 SUPT6HQ7KZ85 1726 aaKnown RBP9.87□□□□□ -0.83
CAGE1-204ENST00000442019 NAIPQ13075 1403 aa9.87□□□□□ -0.83
CAGE1-204ENST00000442019 EHBP1L1Q8N3D4 1523 aa9.87□□□□□ -0.83
CAGE1-204ENST00000442019 SAMD9Q5K651 1589 aa9.86□□□□□ -0.83
CAGE1-204ENST00000442019 GAPVD1Q14C86 1478 aa9.86□□□□□ -0.83
CAGE1-204ENST00000442019 ZBED9Q6R2W3 1325 aa9.86□□□□□ -0.83
CAGE1-204ENST00000442019 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
CAGE1-204ENST00000442019 MYOM3Q5VTT5 1437 aa9.85□□□□□ -0.83
CAGE1-204ENST00000442019 GRIN2AQ12879 1464 aa9.84□□□□□ -0.83
CAGE1-204ENST00000442019 NCOA1Q15788 1441 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms