RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 CHADLQ6NUI6 762 aa8.72□□□□□ -1.01
CCDC140-202ENST00000440903 SSUH2Q9Y2M2 353 aa8.7□□□□□ -1.02
CCDC140-202ENST00000440903 MKRN4PQ13434 485 aaPredicted RBP8.68□□□□□ -1.02
CCDC140-202ENST00000440903 PRR29P0C7W0 189 aa8.67□□□□□ -1.02
CCDC140-202ENST00000440903 CCDC88BA6NC98 1476 aa8.64□□□□□ -1.03
CCDC140-202ENST00000440903 LAMC3Q9Y6N6 1575 aa8.64□□□□□ -1.03
CCDC140-202ENST00000440903 CADPSQ9ULU8 1353 aa8.61□□□□□ -1.03
CCDC140-202ENST00000440903 CD44P16070 742 aaKnown RBP8.59□□□□□ -1.03
CCDC140-202ENST00000440903 CFTRP13569 1480 aa8.58□□□□□ -1.04
CCDC140-202ENST00000440903 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
CCDC140-202ENST00000440903 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
CCDC140-202ENST00000440903 ERCC6Q03468 1493 aa8.57□□□□□ -1.04
CCDC140-202ENST00000440903 CEP164Q9UPV0 1460 aa8.54□□□□□ -1.04
CCDC140-202ENST00000440903 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
CCDC140-202ENST00000440903 NESP48681 1621 aa8.54□□□□□ -1.04
CCDC140-202ENST00000440903 FANCD2Q9BXW9 1451 aa8.53□□□□□ -1.04
CCDC140-202ENST00000440903 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
CCDC140-202ENST00000440903 POTEIP0CG38 1075 aa8.52□□□□□ -1.05
CCDC140-202ENST00000440903 DCBLD2Q96PD2 775 aa8.51□□□□□ -1.05
CCDC140-202ENST00000440903 CLCN6P51797 869 aa8.5□□□□□ -1.05
CCDC140-202ENST00000440903 KIF21AQ7Z4S6 1674 aa8.49□□□□□ -1.05
CCDC140-202ENST00000440903 MRC2Q9UBG0 1479 aa8.48□□□□□ -1.05
CCDC140-202ENST00000440903 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
CCDC140-202ENST00000440903 WRNQ14191 1432 aaPredicted RBP eCLIP8.44□□□□□ -1.06
CCDC140-202ENST00000440903 DNMBPQ6XZF7 1577 aa8.44□□□□□ -1.06
CCDC140-202ENST00000440903 ZRANB1Q9UGI0 708 aa8.43□□□□□ -1.06
CCDC140-202ENST00000440903 WDR62O43379 1518 aa8.43□□□□□ -1.06
CCDC140-202ENST00000440903 THOC2Q8NI27 1593 aaKnown RBP8.43□□□□□ -1.06
CCDC140-202ENST00000440903 ZNF579Q8NAF0 562 aaKnown RBP8.4□□□□□ -1.06
CCDC140-202ENST00000440903 URB2Q14146 1524 aaKnown RBP8.39□□□□□ -1.07
CCDC140-202ENST00000440903 TOPBP1Q92547 1522 aa8.39□□□□□ -1.07
CCDC140-202ENST00000440903 TOP2BQ02880 1626 aa8.39□□□□□ -1.07
CCDC140-202ENST00000440903 BIVM-ERCC5R4GMW8 1640 aa8.39□□□□□ -1.07
CCDC140-202ENST00000440903 CUX2O14529 1486 aa8.38□□□□□ -1.07
CCDC140-202ENST00000440903 CUX1P39880 1505 aa8.37□□□□□ -1.07
CCDC140-202ENST00000440903 SYNJ1O43426 1573 aa8.36□□□□□ -1.07
CCDC140-202ENST00000440903 FGD5Q6ZNL6 1462 aa8.35□□□□□ -1.07
CCDC140-202ENST00000440903 IFT140Q96RY7 1462 aa8.34□□□□□ -1.07
CCDC140-202ENST00000440903 TRIM41Q8WV44 630 aa8.34□□□□□ -1.07
CCDC140-202ENST00000440903 POLA1P09884 1462 aaPredicted RBP8.33□□□□□ -1.08
CCDC140-202ENST00000440903 GALR2O43603 387 aaPredicted RBP8.33□□□□□ -1.08
CCDC140-202ENST00000440903 PAK3O75914 559 aaPredicted RBP8.33□□□□□ -1.08
CCDC140-202ENST00000440903 STAG3Q9UJ98 1225 aa8.32□□□□□ -1.08
CCDC140-202ENST00000440903 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
CCDC140-202ENST00000440903 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
CCDC140-202ENST00000440903 SOGA1O94964 1423 aa8.29□□□□□ -1.08
CCDC140-202ENST00000440903 OTUD5Q96G74 571 aa8.29□□□□□ -1.08
CCDC140-202ENST00000440903 ABCA10Q8WWZ4 1543 aa8.28□□□□□ -1.08
CCDC140-202ENST00000440903 TARBP1Q13395 1621 aaKnown RBP8.27□□□□□ -1.09
CCDC140-202ENST00000440903 KIF27Q86VH2 1401 aa8.27□□□□□ -1.09
CCDC140-202ENST00000440903 RAD54L2Q9Y4B4 1467 aa8.26□□□□□ -1.09
CCDC140-202ENST00000440903 POTEMA6NI47 508 aa8.26□□□□□ -1.09
CCDC140-202ENST00000440903 EHMT2Q96KQ7 1210 aa8.26□□□□□ -1.09
CCDC140-202ENST00000440903 EIF4G3O43432 1585 aaKnown RBP8.26□□□□□ -1.09
CCDC140-202ENST00000440903 PHF12Q96QT6 1004 aa8.25□□□□□ -1.09
CCDC140-202ENST00000440903 EEA1Q15075 1411 aa8.25□□□□□ -1.09
CCDC140-202ENST00000440903 ABCA5Q8WWZ7 1642 aa8.23□□□□□ -1.09
CCDC140-202ENST00000440903 POTEB2H3BUK9 544 aa8.23□□□□□ -1.09
CCDC140-202ENST00000440903 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
CCDC140-202ENST00000440903 GAPVD1Q14C86 1478 aa8.23□□□□□ -1.09
CCDC140-202ENST00000440903 GRIN2BQ13224 1484 aa8.22□□□□□ -1.09
CCDC140-202ENST00000440903 NPM1P06748 294 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC140-202ENST00000440903 PBRM1Q86U86 1689 aa8.21□□□□□ -1.09
CCDC140-202ENST00000440903 TDRD9Q8NDG6 1382 aaKnown RBP8.21□□□□□ -1.1
CCDC140-202ENST00000440903 ERICH3Q5RHP9 1530 aa8.2□□□□□ -1.1
CCDC140-202ENST00000440903 ZNF608Q9ULD9 1512 aaPredicted RBP8.2□□□□□ -1.1
CCDC140-202ENST00000440903 CUL7Q14999 1698 aa8.2□□□□□ -1.1
CCDC140-202ENST00000440903 MAGI1Q96QZ7 1491 aaPredicted RBP8.19□□□□□ -1.1
CCDC140-202ENST00000440903 AQRO60306 1485 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC140-202ENST00000440903 SNAPC4Q5SXM2 1469 aa8.18□□□□□ -1.1
CCDC140-202ENST00000440903 SPDYE4A6NLX3 237 aa8.17□□□□□ -1.1
CCDC140-202ENST00000440903 PELP1Q8IZL8 1130 aaKnown RBP8.17□□□□□ -1.1
CCDC140-202ENST00000440903 METRNQ9UJH8 293 aa8.17□□□□□ -1.1
CCDC140-202ENST00000440903 ADAMTS12P58397 1594 aa8.17□□□□□ -1.1
CCDC140-202ENST00000440903 FHAD1B1AJZ9 1412 aa8.15□□□□□ -1.1
CCDC140-202ENST00000440903 SYNJ2O15056 1496 aa8.14□□□□□ -1.11
CCDC140-202ENST00000440903 CSRNP3Q8WYN3 585 aa8.14□□□□□ -1.11
CCDC140-202ENST00000440903 SLC39A7Q92504 469 aa8.14□□□□□ -1.11
CCDC140-202ENST00000440903 FAM9AQ8IZU1 332 aaPredicted RBP8.13□□□□□ -1.11
CCDC140-202ENST00000440903 MS4A3Q96HJ5 214 aa8.13□□□□□ -1.11
CCDC140-202ENST00000440903 PCDH10Q9P2E7 1040 aa8.13□□□□□ -1.11
CCDC140-202ENST00000440903 KIF21BO75037 1637 aa8.12□□□□□ -1.11
CCDC140-202ENST00000440903 C7P10643 843 aa8.12□□□□□ -1.11
CCDC140-202ENST00000440903 MAMSTRQ6ZN01 415 aa8.12□□□□□ -1.11
CCDC140-202ENST00000440903 CHMP7Q8WUX9 453 aaPredicted RBP8.12□□□□□ -1.11
CCDC140-202ENST00000440903 RAPGEF2Q9Y4G8 1499 aa8.12□□□□□ -1.11
CCDC140-202ENST00000440903 CARMIL1Q5VZK9 1371 aa8.11□□□□□ -1.11
CCDC140-202ENST00000440903 ASTLQ6HA08 431 aaPredicted RBP8.11□□□□□ -1.11
CCDC140-202ENST00000440903 RUSC2Q8N2Y8 1516 aa8.11□□□□□ -1.11
CCDC140-202ENST00000440903 GOLGA3Q08378 1498 aa8.11□□□□□ -1.11
CCDC140-202ENST00000440903 GRIN2AQ12879 1464 aa8.11□□□□□ -1.11
CCDC140-202ENST00000440903 IGF1RP08069 1367 aa8.1□□□□□ -1.11
CCDC140-202ENST00000440903 ATMINO43313 823 aaPredicted RBP8.1□□□□□ -1.11
CCDC140-202ENST00000440903 CHD1O14646 1710 aa8.09□□□□□ -1.11
CCDC140-202ENST00000440903 PRXQ9BXM0 1461 aa8.09□□□□□ -1.11
CCDC140-202ENST00000440903 MNX1P50219 401 aaPredicted RBP8.09□□□□□ -1.11
CCDC140-202ENST00000440903 FAM163AQ96GL9 167 aaPredicted RBP8.08□□□□□ -1.12
CCDC140-202ENST00000440903 SCUBE2Q9NQ36 999 aa8.08□□□□□ -1.12
CCDC140-202ENST00000440903 TSPYL2Q9H2G4 693 aaPredicted RBP8.07□□□□□ -1.12
CCDC140-202ENST00000440903 CTTNBP2Q8WZ74 1663 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms