RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 ABCA10Q8WWZ4 1543 aa19.21■□□□□ 0.67
PDE4A-204ENST00000440014 ZNF608Q9ULD9 1512 aaPredicted RBP19.21■□□□□ 0.67
PDE4A-204ENST00000440014 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
PDE4A-204ENST00000440014 WDR97A6NE52 1622 aa19.19■□□□□ 0.66
PDE4A-204ENST00000440014 BCL11AQ9H165 835 aa19.18■□□□□ 0.66
PDE4A-204ENST00000440014 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
PDE4A-204ENST00000440014 TDRD9Q8NDG6 1382 aaKnown RBP19.15■□□□□ 0.66
PDE4A-204ENST00000440014 ANP32EQ9BTT0 268 aa19.14■□□□□ 0.66
PDE4A-204ENST00000440014 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.652e-6■■■□□ 16.1
PDE4A-204ENST00000440014 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
PDE4A-204ENST00000440014 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.65
PDE4A-204ENST00000440014 ABCA5Q8WWZ7 1642 aa19.09■□□□□ 0.65
PDE4A-204ENST00000440014 GAPVD1Q14C86 1478 aa19.09■□□□□ 0.65
PDE4A-204ENST00000440014 GRIN2BQ13224 1484 aa19.05■□□□□ 0.64
PDE4A-204ENST00000440014 KIF27Q86VH2 1401 aa19.04■□□□□ 0.64
PDE4A-204ENST00000440014 ARAP1Q96P48 1450 aa19■□□□□ 0.63
PDE4A-204ENST00000440014 PBRM1Q86U86 1689 aa19■□□□□ 0.63
PDE4A-204ENST00000440014 RRBP1Q9P2E9 1410 aaKnown RBP18.99■□□□□ 0.63
PDE4A-204ENST00000440014 KANK4Q5T7N3 995 aaPredicted RBP18.99■□□□□ 0.63
PDE4A-204ENST00000440014 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
PDE4A-204ENST00000440014 SNAPC4Q5SXM2 1469 aa18.97■□□□□ 0.63
PDE4A-204ENST00000440014 MAGI1Q96QZ7 1491 aaPredicted RBP18.97■□□□□ 0.63
PDE4A-204ENST00000440014 IGF1RP08069 1367 aa18.94■□□□□ 0.62
PDE4A-204ENST00000440014 KCNH8Q96L42 1107 aa18.94■□□□□ 0.62
PDE4A-204ENST00000440014 PRXQ9BXM0 1461 aa18.91■□□□□ 0.62
PDE4A-204ENST00000440014 BCANQ96GW7 911 aa18.9■□□□□ 0.62
PDE4A-204ENST00000440014 CCNB3Q8WWL7 1395 aa18.9■□□□□ 0.62
PDE4A-204ENST00000440014 ADAMTS12P58397 1594 aa18.89■□□□□ 0.61
PDE4A-204ENST00000440014 SYNJ2O15056 1496 aa18.89■□□□□ 0.61
PDE4A-204ENST00000440014 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
PDE4A-204ENST00000440014 FKBP8Q14318 412 aa18.87■□□□□ 0.61
PDE4A-204ENST00000440014 CUL7Q14999 1698 aa18.85■□□□□ 0.61
PDE4A-204ENST00000440014 CHMP7Q8WUX9 453 aaPredicted RBP18.84■□□□□ 0.61
PDE4A-204ENST00000440014 FBLN2P98095 1184 aa18.83■□□□□ 0.6
PDE4A-204ENST00000440014 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.6
PDE4A-204ENST00000440014 ITGAEP38570 1179 aa18.82■□□□□ 0.6
PDE4A-204ENST00000440014 MAPKBP1O60336 1514 aa18.82■□□□□ 0.6
PDE4A-204ENST00000440014 CHD1O14646 1710 aa18.82■□□□□ 0.6
PDE4A-204ENST00000440014 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
PDE4A-204ENST00000440014 GRIN2AQ12879 1464 aa18.8■□□□□ 0.6
PDE4A-204ENST00000440014 NEFLP07196 543 aa18.78■□□□□ 0.6
PDE4A-204ENST00000440014 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
PDE4A-204ENST00000440014 DDX10Q13206 875 aaKnown RBP18.77■□□□□ 0.6
PDE4A-204ENST00000440014 RBM19Q9Y4C8 960 aaKnown RBP18.75■□□□□ 0.59
PDE4A-204ENST00000440014 ARHGAP35Q9NRY4 1499 aa18.74■□□□□ 0.59
PDE4A-204ENST00000440014 NUP160Q12769 1436 aa18.71■□□□□ 0.59
PDE4A-204ENST00000440014 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
PDE4A-204ENST00000440014 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
PDE4A-204ENST00000440014 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
PDE4A-204ENST00000440014 CCER2I3L3R5 266 aa18.67■□□□□ 0.58
PDE4A-204ENST00000440014 CLASP1Q7Z460 1538 aa18.66■□□□□ 0.58
PDE4A-204ENST00000440014 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
PDE4A-204ENST00000440014 TRIM52Q96A61 297 aa18.64■□□□□ 0.58
PDE4A-204ENST00000440014 TIAM1Q13009 1591 aa18.64■□□□□ 0.57
PDE4A-204ENST00000440014 ANP32CO43423 234 aa18.63■□□□□ 0.57
PDE4A-204ENST00000440014 MAP3K1Q13233 1512 aa18.63■□□□□ 0.57
PDE4A-204ENST00000440014 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
PDE4A-204ENST00000440014 KIAA0586Q9BVV6 1533 aa18.61■□□□□ 0.57
PDE4A-204ENST00000440014 DNAJC5Q9H3Z4 198 aa18.59■□□□□ 0.57
PDE4A-204ENST00000440014 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
PDE4A-204ENST00000440014 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
PDE4A-204ENST00000440014 PHLDB1Q86UU1 1377 aa18.56■□□□□ 0.56
PDE4A-204ENST00000440014 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
PDE4A-204ENST00000440014 MSH5O43196 834 aa18.53■□□□□ 0.56
PDE4A-204ENST00000440014 IQGAP2Q13576 1575 aa18.52■□□□□ 0.56
PDE4A-204ENST00000440014 SHROOM2Q13796 1616 aa18.52■□□□□ 0.56
PDE4A-204ENST00000440014 CTTNBP2Q8WZ74 1663 aa18.52■□□□□ 0.56
PDE4A-204ENST00000440014 JPH4Q96JJ6 628 aa18.52■□□□□ 0.56
PDE4A-204ENST00000440014 FANCIQ9NVI1 1328 aa18.48■□□□□ 0.55
PDE4A-204ENST00000440014 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
PDE4A-204ENST00000440014 CFAP43Q8NDM7 1665 aa18.45■□□□□ 0.54
PDE4A-204ENST00000440014 UGGT2Q9NYU1 1516 aa18.45■□□□□ 0.54
PDE4A-204ENST00000440014 PRG4Q92954 1404 aaPredicted RBP18.45■□□□□ 0.54
PDE4A-204ENST00000440014 CDK11AQ9UQ88 783 aaPredicted RBP18.44■□□□□ 0.54
PDE4A-204ENST00000440014 TONSLQ96HA7 1378 aa18.43■□□□□ 0.54
PDE4A-204ENST00000440014 RIMBP3CA6NJZ7 1639 aa18.42■□□□□ 0.54
PDE4A-204ENST00000440014 RIMBP3BA6NNM3 1639 aa18.42■□□□□ 0.54
PDE4A-204ENST00000440014 RIMBP3Q9UFD9 1639 aa18.42■□□□□ 0.54
PDE4A-204ENST00000440014 PRKCSHP14314 528 aaPredicted RBP18.42■□□□□ 0.54
PDE4A-204ENST00000440014 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
PDE4A-204ENST00000440014 ERCC6L2Q5T890 1561 aa18.41■□□□□ 0.54
PDE4A-204ENST00000440014 PCF11O94913 1555 aaKnown RBP18.4■□□□□ 0.54
PDE4A-204ENST00000440014 HNRNPUQ00839 825 aaKnown RBP eCLIP18.4■□□□□ 0.54
PDE4A-204ENST00000440014 DISP1Q96F81 1524 aa18.39■□□□□ 0.53
PDE4A-204ENST00000440014 CARMIL2Q6F5E8 1435 aa18.39■□□□□ 0.53
PDE4A-204ENST00000440014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.38■□□□□ 0.53
PDE4A-204ENST00000440014 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
PDE4A-204ENST00000440014 ATP1B4Q9UN42 357 aaPredicted RBP18.35■□□□□ 0.53
PDE4A-204ENST00000440014 KIAA0556O60303 1618 aa18.35■□□□□ 0.53
PDE4A-204ENST00000440014 SAMD9Q5K651 1589 aa18.33■□□□□ 0.52
PDE4A-204ENST00000440014 CCDC18Q5T9S5 1454 aa18.32■□□□□ 0.52
PDE4A-204ENST00000440014 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
PDE4A-204ENST00000440014 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
PDE4A-204ENST00000440014 EFCAB5A4FU69 1503 aa18.3■□□□□ 0.52
PDE4A-204ENST00000440014 FYCO1Q9BQS8 1478 aa18.3■□□□□ 0.52
PDE4A-204ENST00000440014 UACAQ9BZF9 1416 aa18.29■□□□□ 0.52
PDE4A-204ENST00000440014 PPP4R2Q9NY27 417 aa18.28■□□□□ 0.52
PDE4A-204ENST00000440014 MYT1LQ9UL68 1186 aa18.28■□□□□ 0.52
PDE4A-204ENST00000440014 PTPRGP23470 1445 aa18.27■□□□□ 0.52
PDE4A-204ENST00000440014 FGD6Q6ZV73 1430 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms