RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
COPS3-203ENST00000439936 CFTRP13569 1480 aa13.28□□□□□ -0.28
COPS3-203ENST00000439936 KIF21AQ7Z4S6 1674 aa13.23□□□□□ -0.29
COPS3-203ENST00000439936 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
COPS3-203ENST00000439936 FANCD2Q9BXW9 1451 aa13.19□□□□□ -0.3
COPS3-203ENST00000439936 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
COPS3-203ENST00000439936 CEP164Q9UPV0 1460 aa13.15□□□□□ -0.3
COPS3-203ENST00000439936 THOC2Q8NI27 1593 aaKnown RBP13.14□□□□□ -0.31
COPS3-203ENST00000439936 CUX2O14529 1486 aa13.11□□□□□ -0.31
COPS3-203ENST00000439936 MRC2Q9UBG0 1479 aa13.11□□□□□ -0.31
COPS3-203ENST00000439936 PRKAR2AP13861 404 aaKnown RBP13.11□□□□□ -0.31
COPS3-203ENST00000439936 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
COPS3-203ENST00000439936 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
COPS3-203ENST00000439936 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.31
COPS3-203ENST00000439936 URB2Q14146 1524 aaKnown RBP13.07□□□□□ -0.32
COPS3-203ENST00000439936 EVX2Q03828 476 aa13.07□□□□□ -0.32
COPS3-203ENST00000439936 WDR62O43379 1518 aa13.05□□□□□ -0.32
COPS3-203ENST00000439936 C19orf67A6NJJ6 358 aa13□□□□□ -0.33
COPS3-203ENST00000439936 ABCC8Q09428 1581 aa12.99□□□□□ -0.33
COPS3-203ENST00000439936 TOPBP1Q92547 1522 aa12.99□□□□□ -0.33
COPS3-203ENST00000439936 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
COPS3-203ENST00000439936 CUX1P39880 1505 aa12.92□□□□□ -0.34
COPS3-203ENST00000439936 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
COPS3-203ENST00000439936 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
COPS3-203ENST00000439936 IFT140Q96RY7 1462 aa12.88□□□□□ -0.35
COPS3-203ENST00000439936 SOGA1O94964 1423 aa12.88□□□□□ -0.35
COPS3-203ENST00000439936 GABBR2O75899 941 aa12.87□□□□□ -0.35
COPS3-203ENST00000439936 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
COPS3-203ENST00000439936 FGD5Q6ZNL6 1462 aa12.86□□□□□ -0.35
COPS3-203ENST00000439936 RAD54L2Q9Y4B4 1467 aa12.86□□□□□ -0.35
COPS3-203ENST00000439936 ZNF608Q9ULD9 1512 aaPredicted RBP12.85□□□□□ -0.35
COPS3-203ENST00000439936 TARBP1Q13395 1621 aaKnown RBP12.84□□□□□ -0.35
COPS3-203ENST00000439936 SYNJ1O43426 1573 aa12.82□□□□□ -0.36
COPS3-203ENST00000439936 TOP2BQ02880 1626 aa12.82□□□□□ -0.36
COPS3-203ENST00000439936 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
COPS3-203ENST00000439936 BIVM-ERCC5R4GMW8 1640 aa12.81□□□□□ -0.36
COPS3-203ENST00000439936 AQRO60306 1485 aaKnown RBP eCLIP12.81□□□□□ -0.363e-7■■■■■ 36.6
COPS3-203ENST00000439936 TDRD9Q8NDG6 1382 aaKnown RBP12.8□□□□□ -0.36
COPS3-203ENST00000439936 CLCN6P51797 869 aa12.8□□□□□ -0.36
COPS3-203ENST00000439936 LHX8Q68G74 356 aa12.75□□□□□ -0.37
COPS3-203ENST00000439936 EIF4G3O43432 1585 aaKnown RBP12.74□□□□□ -0.37
COPS3-203ENST00000439936 ABCA10Q8WWZ4 1543 aa12.74□□□□□ -0.37
COPS3-203ENST00000439936 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
COPS3-203ENST00000439936 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
COPS3-203ENST00000439936 GAPVD1Q14C86 1478 aa12.7□□□□□ -0.38
COPS3-203ENST00000439936 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
COPS3-203ENST00000439936 CD44P16070 742 aaKnown RBP12.69□□□□□ -0.38
COPS3-203ENST00000439936 FARP1Q9Y4F1 1045 aaPredicted RBP12.69□□□□□ -0.38
COPS3-203ENST00000439936 GRIN2BQ13224 1484 aa12.67□□□□□ -0.38
COPS3-203ENST00000439936 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
COPS3-203ENST00000439936 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
COPS3-203ENST00000439936 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
COPS3-203ENST00000439936 PBRM1Q86U86 1689 aa12.63□□□□□ -0.39
COPS3-203ENST00000439936 SNAPC4Q5SXM2 1469 aa12.63□□□□□ -0.39
COPS3-203ENST00000439936 MAGI1Q96QZ7 1491 aaPredicted RBP12.62□□□□□ -0.39
COPS3-203ENST00000439936 CHD1O14646 1710 aa12.6□□□□□ -0.39
COPS3-203ENST00000439936 IGF1RP08069 1367 aa12.6□□□□□ -0.39
COPS3-203ENST00000439936 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
COPS3-203ENST00000439936 STAG3Q9UJ98 1225 aa12.58□□□□□ -0.4
COPS3-203ENST00000439936 ERICH3Q5RHP9 1530 aa12.58□□□□□ -0.4
COPS3-203ENST00000439936 SYNJ2O15056 1496 aa12.57□□□□□ -0.4
COPS3-203ENST00000439936 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
COPS3-203ENST00000439936 FHAD1B1AJZ9 1412 aa12.55□□□□□ -0.4
COPS3-203ENST00000439936 POTEIP0CG38 1075 aa12.52□□□□□ -0.41
COPS3-203ENST00000439936 DCBLD2Q96PD2 775 aa12.52□□□□□ -0.41
COPS3-203ENST00000439936 ADAMTS12P58397 1594 aa12.51□□□□□ -0.41
COPS3-203ENST00000439936 GRIN2AQ12879 1464 aa12.5□□□□□ -0.41
COPS3-203ENST00000439936 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
COPS3-203ENST00000439936 FKBP8Q14318 412 aa12.5□□□□□ -0.41
COPS3-203ENST00000439936 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
COPS3-203ENST00000439936 CUL7Q14999 1698 aa12.46□□□□□ -0.42
COPS3-203ENST00000439936 FAM9AQ8IZU1 332 aaPredicted RBP12.45□□□□□ -0.42
COPS3-203ENST00000439936 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
COPS3-203ENST00000439936 NUP160Q12769 1436 aa12.45□□□□□ -0.42
COPS3-203ENST00000439936 PROM2Q8N271 834 aa12.44□□□□□ -0.42
COPS3-203ENST00000439936 CLASP1Q7Z460 1538 aa12.44□□□□□ -0.42
COPS3-203ENST00000439936 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
COPS3-203ENST00000439936 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
COPS3-203ENST00000439936 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
COPS3-203ENST00000439936 RAPGEF2Q9Y4G8 1499 aa12.41□□□□□ -0.42
COPS3-203ENST00000439936 PAK3O75914 559 aaPredicted RBP12.4□□□□□ -0.42
COPS3-203ENST00000439936 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
COPS3-203ENST00000439936 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
COPS3-203ENST00000439936 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
COPS3-203ENST00000439936 ARHGEF11O15085 1522 aa12.4□□□□□ -0.42
COPS3-203ENST00000439936 EEA1Q15075 1411 aa12.4□□□□□ -0.43
COPS3-203ENST00000439936 PRXQ9BXM0 1461 aa12.38□□□□□ -0.43
COPS3-203ENST00000439936 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
COPS3-203ENST00000439936 KIAA0586Q9BVV6 1533 aa12.37□□□□□ -0.43
COPS3-203ENST00000439936 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
COPS3-203ENST00000439936 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
COPS3-203ENST00000439936 SHROOM2Q13796 1616 aa12.32□□□□□ -0.44
COPS3-203ENST00000439936 ERCC6L2Q5T890 1561 aa12.32□□□□□ -0.44
COPS3-203ENST00000439936 ARAP1Q96P48 1450 aa12.3□□□□□ -0.44
COPS3-203ENST00000439936 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
COPS3-203ENST00000439936 IQGAP2Q13576 1575 aa12.27□□□□□ -0.44
COPS3-203ENST00000439936 MNX1P50219 401 aaPredicted RBP12.27□□□□□ -0.45
COPS3-203ENST00000439936 CTTNBP2Q8WZ74 1663 aa12.25□□□□□ -0.45
COPS3-203ENST00000439936 KIF21BO75037 1637 aa12.24□□□□□ -0.45
COPS3-203ENST00000439936 UBTFP17480 764 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms