RNA–Protein interactions for RNA: ENST00000438354.6

LYVE1-202, Transcript of lymphatic vessel endothelial hyaluronan receptor 1, humanhuman

TSL 5

Gene LYVE1, Length 1,823 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYVE1-202ENST00000438354 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
LYVE1-202ENST00000438354 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
LYVE1-202ENST00000438354 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
LYVE1-202ENST00000438354 CUX1P39880 1505 aa12.12□□□□□ -0.47
LYVE1-202ENST00000438354 URB2Q14146 1524 aaKnown RBP12.12□□□□□ -0.47
LYVE1-202ENST00000438354 WRNQ14191 1432 aaPredicted RBP eCLIP12.09□□□□□ -0.47
LYVE1-202ENST00000438354 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
LYVE1-202ENST00000438354 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
LYVE1-202ENST00000438354 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
LYVE1-202ENST00000438354 DSG3P32926 999 aa12.04□□□□□ -0.48
LYVE1-202ENST00000438354 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
LYVE1-202ENST00000438354 DNMBPQ6XZF7 1577 aa12.03□□□□□ -0.48
LYVE1-202ENST00000438354 TOP2BQ02880 1626 aa12.03□□□□□ -0.48
LYVE1-202ENST00000438354 BIVM-ERCC5R4GMW8 1640 aa12.02□□□□□ -0.49
LYVE1-202ENST00000438354 TRIM41Q8WV44 630 aa12.02□□□□□ -0.49
LYVE1-202ENST00000438354 WDR62O43379 1518 aa12.01□□□□□ -0.49
LYVE1-202ENST00000438354 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
LYVE1-202ENST00000438354 OSCARQ8IYS5 282 aa12□□□□□ -0.49
LYVE1-202ENST00000438354 RAD54L2Q9Y4B4 1467 aa12□□□□□ -0.49
LYVE1-202ENST00000438354 PKD2Q13563 968 aa11.99□□□□□ -0.49
LYVE1-202ENST00000438354 POLA1P09884 1462 aaPredicted RBP11.99□□□□□ -0.49
LYVE1-202ENST00000438354 CUX2O14529 1486 aa11.98□□□□□ -0.49
LYVE1-202ENST00000438354 RUSC2Q8N2Y8 1516 aa11.96□□□□□ -0.5
LYVE1-202ENST00000438354 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
LYVE1-202ENST00000438354 SOGA1O94964 1423 aa11.93□□□□□ -0.5
LYVE1-202ENST00000438354 TARBP1Q13395 1621 aaKnown RBP11.92□□□□□ -0.5
LYVE1-202ENST00000438354 ZNF608Q9ULD9 1512 aaPredicted RBP11.91□□□□□ -0.5
LYVE1-202ENST00000438354 PLCB2Q00722 1185 aa11.9□□□□□ -0.5
LYVE1-202ENST00000438354 FAM9AQ8IZU1 332 aaPredicted RBP11.9□□□□□ -0.5
LYVE1-202ENST00000438354 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
LYVE1-202ENST00000438354 WDR97A6NE52 1622 aa11.88□□□□□ -0.51
LYVE1-202ENST00000438354 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
LYVE1-202ENST00000438354 AQRO60306 1485 aaKnown RBP eCLIP11.86□□□□□ -0.51
LYVE1-202ENST00000438354 SPDYE2BA6NHP3 402 aa11.85□□□□□ -0.51
LYVE1-202ENST00000438354 SPDYE6P0CI01 402 aa11.85□□□□□ -0.51
LYVE1-202ENST00000438354 SPDYE2Q495Y8 402 aa11.85□□□□□ -0.51
LYVE1-202ENST00000438354 ABCA10Q8WWZ4 1543 aa11.85□□□□□ -0.51
LYVE1-202ENST00000438354 IFT140Q96RY7 1462 aa11.84□□□□□ -0.51
LYVE1-202ENST00000438354 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
LYVE1-202ENST00000438354 EIF4G3O43432 1585 aaKnown RBP11.81□□□□□ -0.52
LYVE1-202ENST00000438354 ABCA5Q8WWZ7 1642 aa11.81□□□□□ -0.52
LYVE1-202ENST00000438354 SPOCK2Q92563 424 aa11.8□□□□□ -0.52
LYVE1-202ENST00000438354 ARXQ96QS3 562 aa11.79□□□□□ -0.52
LYVE1-202ENST00000438354 TTBK1Q5TCY1 1321 aaPredicted RBP11.78□□□□□ -0.52
LYVE1-202ENST00000438354 GAPVD1Q14C86 1478 aa11.78□□□□□ -0.52
LYVE1-202ENST00000438354 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
LYVE1-202ENST00000438354 IGF1RP08069 1367 aa11.76□□□□□ -0.53
LYVE1-202ENST00000438354 PBRM1Q86U86 1689 aa11.76□□□□□ -0.53
LYVE1-202ENST00000438354 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
LYVE1-202ENST00000438354 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
LYVE1-202ENST00000438354 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
LYVE1-202ENST00000438354 LOC105371045A0A1W2PR82 267 aa11.73□□□□□ -0.53
LYVE1-202ENST00000438354 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
LYVE1-202ENST00000438354 PRKCSHP14314 528 aaPredicted RBP11.73□□□□□ -0.53
LYVE1-202ENST00000438354 MIER1Q8N108 512 aa11.72□□□□□ -0.53
LYVE1-202ENST00000438354 SNAPC4Q5SXM2 1469 aa11.72□□□□□ -0.53
LYVE1-202ENST00000438354 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.54
LYVE1-202ENST00000438354 GRIN2BQ13224 1484 aa11.7□□□□□ -0.54
LYVE1-202ENST00000438354 RAPGEF2Q9Y4G8 1499 aa11.69□□□□□ -0.54
LYVE1-202ENST00000438354 ERICH3Q5RHP9 1530 aa11.68□□□□□ -0.54
LYVE1-202ENST00000438354 RGL2O15211 777 aa11.68□□□□□ -0.54
LYVE1-202ENST00000438354 ADAMTS12P58397 1594 aa11.67□□□□□ -0.54
LYVE1-202ENST00000438354 PRXQ9BXM0 1461 aa11.67□□□□□ -0.54
LYVE1-202ENST00000438354 EEA1Q15075 1411 aa11.66□□□□□ -0.54
LYVE1-202ENST00000438354 CARMIL1Q5VZK9 1371 aa11.66□□□□□ -0.54
LYVE1-202ENST00000438354 CHD1O14646 1710 aa11.63□□□□□ -0.55
LYVE1-202ENST00000438354 CUL7Q14999 1698 aa11.63□□□□□ -0.55
LYVE1-202ENST00000438354 KIF21BO75037 1637 aa11.62□□□□□ -0.55
LYVE1-202ENST00000438354 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
LYVE1-202ENST00000438354 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
LYVE1-202ENST00000438354 PELP1Q8IZL8 1130 aaKnown RBP11.61□□□□□ -0.55
LYVE1-202ENST00000438354 SYNJ2O15056 1496 aa11.6□□□□□ -0.55
LYVE1-202ENST00000438354 MYT1Q01538 1121 aa11.6□□□□□ -0.55
LYVE1-202ENST00000438354 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
LYVE1-202ENST00000438354 CHMP7Q8WUX9 453 aaPredicted RBP11.58□□□□□ -0.56
LYVE1-202ENST00000438354 CEP170Q5SW79 1584 aa11.58□□□□□ -0.56
LYVE1-202ENST00000438354 CIZ1Q9ULV3 898 aaPredicted RBP11.57□□□□□ -0.56
LYVE1-202ENST00000438354 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
LYVE1-202ENST00000438354 RANGAP1P46060 587 aaPredicted RBP11.56□□□□□ -0.56
LYVE1-202ENST00000438354 BBXQ8WY36 941 aaPredicted RBP11.56□□□□□ -0.56
LYVE1-202ENST00000438354 UBTFP17480 764 aaKnown RBP11.56□□□□□ -0.56
LYVE1-202ENST00000438354 TIMELESSQ9UNS1 1208 aa11.56□□□□□ -0.56
LYVE1-202ENST00000438354 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
LYVE1-202ENST00000438354 CFAP44Q96MT7 982 aa11.52□□□□□ -0.57
LYVE1-202ENST00000438354 KDM2AQ9Y2K7 1162 aa11.52□□□□□ -0.57
LYVE1-202ENST00000438354 NUP160Q12769 1436 aa11.51□□□□□ -0.57
LYVE1-202ENST00000438354 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
LYVE1-202ENST00000438354 CTTNBP2Q8WZ74 1663 aa11.5□□□□□ -0.57
LYVE1-202ENST00000438354 VSIG10Q8N0Z9 540 aa11.49□□□□□ -0.57
LYVE1-202ENST00000438354 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
LYVE1-202ENST00000438354 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
LYVE1-202ENST00000438354 CLASP1Q7Z460 1538 aa11.47□□□□□ -0.57
LYVE1-202ENST00000438354 PLEKHG5O94827 1062 aa11.46□□□□□ -0.57
LYVE1-202ENST00000438354 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
LYVE1-202ENST00000438354 RNF25Q96BH1 459 aaPredicted RBP11.46□□□□□ -0.57
LYVE1-202ENST00000438354 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
LYVE1-202ENST00000438354 ERCC6L2Q5T890 1561 aa11.46□□□□□ -0.57
LYVE1-202ENST00000438354 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.58
LYVE1-202ENST00000438354 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
LYVE1-202ENST00000438354 P3H3Q8IVL6 736 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms