RNA–Protein interactions for RNA: ENST00000438354.6

LYVE1-202, Transcript of lymphatic vessel endothelial hyaluronan receptor 1, humanhuman

TSL 5

Gene LYVE1, Length 1,823 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYVE1-202ENST00000438354 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
LYVE1-202ENST00000438354 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
LYVE1-202ENST00000438354 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
LYVE1-202ENST00000438354 SENP3Q9H4L4 574 aaPredicted RBP17.12■□□□□ 0.33
LYVE1-202ENST00000438354 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
LYVE1-202ENST00000438354 NISCHQ9Y2I1 1504 aa16.7■□□□□ 0.26
LYVE1-202ENST00000438354 POTEDQ86YR6 584 aa16.33■□□□□ 0.2
LYVE1-202ENST00000438354 ADRA2BP18089 450 aa15.96■□□□□ 0.14
LYVE1-202ENST00000438354 FOXD1Q16676 465 aa15.96■□□□□ 0.14
LYVE1-202ENST00000438354 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
LYVE1-202ENST00000438354 KCNA4P22459 653 aa15.37■□□□□ 0.05
LYVE1-202ENST00000438354 PIAS4Q8N2W9 510 aaPredicted RBP15.15■□□□□ 0.02
LYVE1-202ENST00000438354 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
LYVE1-202ENST00000438354 PPP4R3CPQ6ZMV5 832 aa14.96□□□□□ -0.01
LYVE1-202ENST00000438354 SLC4A1APQ9BWU0 796 aaKnown RBP14.64□□□□□ -0.07
LYVE1-202ENST00000438354 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
LYVE1-202ENST00000438354 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
LYVE1-202ENST00000438354 NPM3O75607 178 aaKnown RBP14.56□□□□□ -0.08
LYVE1-202ENST00000438354 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
LYVE1-202ENST00000438354 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
LYVE1-202ENST00000438354 MSH5O43196 834 aa14.31□□□□□ -0.12
LYVE1-202ENST00000438354 MAPK8IP2Q13387 824 aaPredicted RBP14.26□□□□□ -0.13
LYVE1-202ENST00000438354 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
LYVE1-202ENST00000438354 ZBTB22O15209 634 aa14.22□□□□□ -0.13
LYVE1-202ENST00000438354 ABCC9O60706 1549 aa14.21□□□□□ -0.14
LYVE1-202ENST00000438354 ZCCHC6Q5VYS8 1495 aaKnown RBP13.97□□□□□ -0.17
LYVE1-202ENST00000438354 DCAF8L2P0C7V8 631 aa13.93□□□□□ -0.18
LYVE1-202ENST00000438354 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
LYVE1-202ENST00000438354 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
LYVE1-202ENST00000438354 FOXD4L1Q9NU39 408 aa13.85□□□□□ -0.19
LYVE1-202ENST00000438354 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
LYVE1-202ENST00000438354 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
LYVE1-202ENST00000438354 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
LYVE1-202ENST00000438354 SLC24A1O60721 1099 aa13.7□□□□□ -0.22
LYVE1-202ENST00000438354 NACADO15069 1562 aa13.68□□□□□ -0.22
LYVE1-202ENST00000438354 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
LYVE1-202ENST00000438354 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
LYVE1-202ENST00000438354 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
LYVE1-202ENST00000438354 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
LYVE1-202ENST00000438354 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
LYVE1-202ENST00000438354 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
LYVE1-202ENST00000438354 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
LYVE1-202ENST00000438354 BICRAQ9NZM4 1560 aa13.36□□□□□ -0.27
LYVE1-202ENST00000438354 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
LYVE1-202ENST00000438354 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
LYVE1-202ENST00000438354 DCAF8L1A6NGE4 600 aa13.2□□□□□ -0.3
LYVE1-202ENST00000438354 ATF5Q9Y2D1 282 aaPredicted RBP13.14□□□□□ -0.31
LYVE1-202ENST00000438354 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
LYVE1-202ENST00000438354 FKBP8Q14318 412 aa13.07□□□□□ -0.32
LYVE1-202ENST00000438354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.32
LYVE1-202ENST00000438354 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
LYVE1-202ENST00000438354 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
LYVE1-202ENST00000438354 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.34
LYVE1-202ENST00000438354 EIF4G1Q04637 1599 aaKnown RBP12.93□□□□□ -0.34
LYVE1-202ENST00000438354 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
LYVE1-202ENST00000438354 RSF1Q96T23 1441 aaPredicted RBP12.88□□□□□ -0.35
LYVE1-202ENST00000438354 BAZ1AQ9NRL2 1556 aaPredicted RBP12.87□□□□□ -0.35
LYVE1-202ENST00000438354 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
LYVE1-202ENST00000438354 WIZO95785 1651 aa12.85□□□□□ -0.35
LYVE1-202ENST00000438354 SUPT5HO00267 1087 aaKnown RBP12.85□□□□□ -0.35
LYVE1-202ENST00000438354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
LYVE1-202ENST00000438354 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
LYVE1-202ENST00000438354 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
LYVE1-202ENST00000438354 AMER1Q5JTC6 1135 aaPredicted RBP12.82□□□□□ -0.36
LYVE1-202ENST00000438354 ATAD2BQ9ULI0 1458 aa12.76□□□□□ -0.37
LYVE1-202ENST00000438354 PEG3Q9GZU2 1588 aa12.72□□□□□ -0.37
LYVE1-202ENST00000438354 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
LYVE1-202ENST00000438354 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
LYVE1-202ENST00000438354 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
LYVE1-202ENST00000438354 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.39
LYVE1-202ENST00000438354 TOP2AP11388 1531 aaKnown RBP12.62□□□□□ -0.39
LYVE1-202ENST00000438354 HMGXB3Q12766 1538 aa12.6□□□□□ -0.39
LYVE1-202ENST00000438354 MKRN4PQ13434 485 aaPredicted RBP12.56□□□□□ -0.4
LYVE1-202ENST00000438354 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
LYVE1-202ENST00000438354 CCDC88BA6NC98 1476 aa12.53□□□□□ -0.4
LYVE1-202ENST00000438354 APLP2Q06481 763 aa12.49□□□□□ -0.41
LYVE1-202ENST00000438354 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
LYVE1-202ENST00000438354 SPDYE4A6NLX3 237 aa12.45□□□□□ -0.42
LYVE1-202ENST00000438354 NESP48681 1621 aa12.43□□□□□ -0.42
LYVE1-202ENST00000438354 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
LYVE1-202ENST00000438354 DAXXQ9UER7 740 aaPredicted RBP12.41□□□□□ -0.42
LYVE1-202ENST00000438354 POLA2Q14181 598 aa12.39□□□□□ -0.43
LYVE1-202ENST00000438354 POTEHQ6S545 545 aa12.36□□□□□ -0.43
LYVE1-202ENST00000438354 CAPN15O75808 1086 aa12.35□□□□□ -0.43
LYVE1-202ENST00000438354 PROM2Q8N271 834 aa12.34□□□□□ -0.43
LYVE1-202ENST00000438354 CADPSQ9ULU8 1353 aa12.32□□□□□ -0.44
LYVE1-202ENST00000438354 CFTRP13569 1480 aa12.32□□□□□ -0.44
LYVE1-202ENST00000438354 FBLN2P98095 1184 aa12.3□□□□□ -0.44
LYVE1-202ENST00000438354 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
LYVE1-202ENST00000438354 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
LYVE1-202ENST00000438354 ABCB7O75027 752 aa12.26□□□□□ -0.45
LYVE1-202ENST00000438354 LAMC3Q9Y6N6 1575 aa12.26□□□□□ -0.45
LYVE1-202ENST00000438354 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
LYVE1-202ENST00000438354 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
LYVE1-202ENST00000438354 PRDM2Q13029 1718 aa12.22□□□□□ -0.45
LYVE1-202ENST00000438354 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
LYVE1-202ENST00000438354 C1QBPQ07021 282 aaKnown RBP12.21□□□□□ -0.45
LYVE1-202ENST00000438354 FANCD2Q9BXW9 1451 aa12.2□□□□□ -0.46
LYVE1-202ENST00000438354 IFNLR1Q8IU57 520 aaPredicted RBP12.17□□□□□ -0.46
LYVE1-202ENST00000438354 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms