RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 RAPGEF2Q9Y4G8 1499 aa15.41■□□□□ 0.06
LINC00858-202ENST00000437892 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
LINC00858-202ENST00000437892 IGF1RP08069 1367 aa15.39■□□□□ 0.05
LINC00858-202ENST00000437892 CUL7Q14999 1698 aa15.39■□□□□ 0.05
LINC00858-202ENST00000437892 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
LINC00858-202ENST00000437892 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
LINC00858-202ENST00000437892 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
LINC00858-202ENST00000437892 GAPVD1Q14C86 1478 aa15.32■□□□□ 0.04
LINC00858-202ENST00000437892 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
LINC00858-202ENST00000437892 CARMIL1Q5VZK9 1371 aa15.3■□□□□ 0.04
LINC00858-202ENST00000437892 ZBTB22O15209 634 aa15.28■□□□□ 0.04
LINC00858-202ENST00000437892 UBTFP17480 764 aaKnown RBP15.28■□□□□ 0.04
LINC00858-202ENST00000437892 PBRM1Q86U86 1689 aa15.27■□□□□ 0.03
LINC00858-202ENST00000437892 EHMT2Q96KQ7 1210 aa15.25■□□□□ 0.03
LINC00858-202ENST00000437892 CLIP1P30622 1438 aa15.25■□□□□ 0.03
LINC00858-202ENST00000437892 TDRD9Q8NDG6 1382 aaKnown RBP15.24■□□□□ 0.03
LINC00858-202ENST00000437892 GRIN2BQ13224 1484 aa15.23■□□□□ 0.03
LINC00858-202ENST00000437892 ADAMTS12P58397 1594 aa15.23■□□□□ 0.03
LINC00858-202ENST00000437892 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
LINC00858-202ENST00000437892 EIF4G3O43432 1585 aaKnown RBP15.22■□□□□ 0.03
LINC00858-202ENST00000437892 FHAD1B1AJZ9 1412 aa15.18■□□□□ 0.02
LINC00858-202ENST00000437892 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
LINC00858-202ENST00000437892 CTTNBP2Q8WZ74 1663 aa15.18■□□□□ 0.02
LINC00858-202ENST00000437892 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
LINC00858-202ENST00000437892 AQRO60306 1485 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC00858-202ENST00000437892 VPS8Q8N3P4 1428 aa15.16■□□□□ 0.02
LINC00858-202ENST00000437892 MAGI1Q96QZ7 1491 aaPredicted RBP15.14■□□□□ 0.01
LINC00858-202ENST00000437892 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
LINC00858-202ENST00000437892 EFCAB5A4FU69 1503 aa15.13■□□□□ 0.01
LINC00858-202ENST00000437892 ARHGAP35Q9NRY4 1499 aa15.12■□□□□ 0.01
LINC00858-202ENST00000437892 SNAPC4Q5SXM2 1469 aa15.09■□□□□ 0.01
LINC00858-202ENST00000437892 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
LINC00858-202ENST00000437892 SYNJ2O15056 1496 aa15.06■□□□□ 0
LINC00858-202ENST00000437892 SAMD9Q5K651 1589 aa15.06■□□□□ 0
LINC00858-202ENST00000437892 GRIN2AQ12879 1464 aa15.05■□□□□ -0
LINC00858-202ENST00000437892 IQGAP2Q13576 1575 aa15.02■□□□□ -0
LINC00858-202ENST00000437892 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
LINC00858-202ENST00000437892 KIAA0586Q9BVV6 1533 aa14.99□□□□□ -0.01
LINC00858-202ENST00000437892 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
LINC00858-202ENST00000437892 TRIM26Q12899 539 aaPredicted RBP14.98□□□□□ -0.01
LINC00858-202ENST00000437892 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
LINC00858-202ENST00000437892 NUP160Q12769 1436 aa14.97□□□□□ -0.01
LINC00858-202ENST00000437892 FYCO1Q9BQS8 1478 aa14.95□□□□□ -0.02
LINC00858-202ENST00000437892 FMN1Q68DA7 1419 aa14.94□□□□□ -0.02
LINC00858-202ENST00000437892 CEP170Q5SW79 1584 aa14.94□□□□□ -0.02
LINC00858-202ENST00000437892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
LINC00858-202ENST00000437892 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
LINC00858-202ENST00000437892 PCF11O94913 1555 aaKnown RBP14.92□□□□□ -0.02
LINC00858-202ENST00000437892 FHOD3Q2V2M9 1422 aa14.91□□□□□ -0.02
LINC00858-202ENST00000437892 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
LINC00858-202ENST00000437892 CFAP43Q8NDM7 1665 aa14.9□□□□□ -0.02
LINC00858-202ENST00000437892 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
LINC00858-202ENST00000437892 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
LINC00858-202ENST00000437892 KIAA0556O60303 1618 aa14.88□□□□□ -0.03
LINC00858-202ENST00000437892 TIAM1Q13009 1591 aa14.88□□□□□ -0.03
LINC00858-202ENST00000437892 CHMP7Q8WUX9 453 aaPredicted RBP14.87□□□□□ -0.03
LINC00858-202ENST00000437892 DISP1Q96F81 1524 aa14.86□□□□□ -0.03
LINC00858-202ENST00000437892 APLP2Q06481 763 aa14.85□□□□□ -0.03
LINC00858-202ENST00000437892 PCGF6Q9BYE7 350 aa14.85□□□□□ -0.03
LINC00858-202ENST00000437892 CHD1O14646 1710 aa14.84□□□□□ -0.03
LINC00858-202ENST00000437892 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.04
LINC00858-202ENST00000437892 CAPN15O75808 1086 aa14.82□□□□□ -0.04
LINC00858-202ENST00000437892 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
LINC00858-202ENST00000437892 SHROOM2Q13796 1616 aa14.79□□□□□ -0.04
LINC00858-202ENST00000437892 CCDC18Q5T9S5 1454 aa14.79□□□□□ -0.04
LINC00858-202ENST00000437892 LRRC9Q6ZRR7 1453 aa14.79□□□□□ -0.04
LINC00858-202ENST00000437892 CARMIL2Q6F5E8 1435 aa14.77□□□□□ -0.04
LINC00858-202ENST00000437892 DSG3P32926 999 aa14.76□□□□□ -0.05
LINC00858-202ENST00000437892 CLASP1Q7Z460 1538 aa14.76□□□□□ -0.05
LINC00858-202ENST00000437892 PPARGC1BQ86YN6 1023 aaKnown RBP14.75□□□□□ -0.05
LINC00858-202ENST00000437892 P3H3Q8IVL6 736 aa14.74□□□□□ -0.05
LINC00858-202ENST00000437892 LRRIQ1Q96JM4 1722 aa14.74□□□□□ -0.05
LINC00858-202ENST00000437892 FBLN2P98095 1184 aa14.73□□□□□ -0.05
LINC00858-202ENST00000437892 RRBP1Q9P2E9 1410 aaKnown RBP14.73□□□□□ -0.05
LINC00858-202ENST00000437892 EHBP1L1Q8N3D4 1523 aa14.72□□□□□ -0.05
LINC00858-202ENST00000437892 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
LINC00858-202ENST00000437892 RAPGEF6Q8TEU7 1601 aa14.72□□□□□ -0.05
LINC00858-202ENST00000437892 KANK4Q5T7N3 995 aaPredicted RBP14.71□□□□□ -0.05
LINC00858-202ENST00000437892 JPH4Q96JJ6 628 aa14.7□□□□□ -0.06
LINC00858-202ENST00000437892 EPRSP07814 1512 aaKnown RBP14.7□□□□□ -0.06
LINC00858-202ENST00000437892 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
LINC00858-202ENST00000437892 NUP153P49790 1475 aaKnown RBP14.68□□□□□ -0.06
LINC00858-202ENST00000437892 ATXN8OSP0DMR3 200 aa14.67□□□□□ -0.06
LINC00858-202ENST00000437892 ABCA8O94911 1581 aa14.67□□□□□ -0.06
LINC00858-202ENST00000437892 ARHGEF11O15085 1522 aa14.66□□□□□ -0.06
LINC00858-202ENST00000437892 PRG4Q92954 1404 aaPredicted RBP14.66□□□□□ -0.06
LINC00858-202ENST00000437892 SUPT6HQ7KZ85 1726 aaKnown RBP14.63□□□□□ -0.07
LINC00858-202ENST00000437892 TTBK1Q5TCY1 1321 aaPredicted RBP14.63□□□□□ -0.07
LINC00858-202ENST00000437892 MTUS2Q5JR59 1369 aa14.62□□□□□ -0.07
LINC00858-202ENST00000437892 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
LINC00858-202ENST00000437892 CCNB3Q8WWL7 1395 aa14.61□□□□□ -0.07
LINC00858-202ENST00000437892 PLB1Q6P1J6 1458 aa14.61□□□□□ -0.07
LINC00858-202ENST00000437892 CDK13Q14004 1512 aaKnown RBP14.61□□□□□ -0.07
LINC00858-202ENST00000437892 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
LINC00858-202ENST00000437892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC00858-202ENST00000437892 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
LINC00858-202ENST00000437892 ABCB7O75027 752 aa14.59□□□□□ -0.07
LINC00858-202ENST00000437892 ADCY10Q96PN6 1610 aa14.57□□□□□ -0.08
LINC00858-202ENST00000437892 PTPRGP23470 1445 aa14.57□□□□□ -0.08
LINC00858-202ENST00000437892 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms