RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 CARMIL1Q5VZK9 1371 aa6.15□□□□□ -1.43
HLA-N-201ENST00000437516 FHAD1B1AJZ9 1412 aa6.15□□□□□ -1.43
HLA-N-201ENST00000437516 LRRC9Q6ZRR7 1453 aa6.15□□□□□ -1.43
HLA-N-201ENST00000437516 ITGAEP38570 1179 aa6.14□□□□□ -1.43
HLA-N-201ENST00000437516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.14□□□□□ -1.43
HLA-N-201ENST00000437516 PHLDB1Q86UU1 1377 aa6.12□□□□□ -1.43
HLA-N-201ENST00000437516 TSHZ2Q9NRE2 1034 aa6.12□□□□□ -1.43
HLA-N-201ENST00000437516 CADPSQ9ULU8 1353 aa6.12□□□□□ -1.43
HLA-N-201ENST00000437516 FGD5Q6ZNL6 1462 aa6.11□□□□□ -1.43
HLA-N-201ENST00000437516 CCER2I3L3R5 266 aa6.11□□□□□ -1.43
HLA-N-201ENST00000437516 PPP1R15AO75807 674 aaPredicted RBP6.11□□□□□ -1.43
HLA-N-201ENST00000437516 PRDM2Q13029 1718 aa6.11□□□□□ -1.43
HLA-N-201ENST00000437516 CFAP43Q8NDM7 1665 aa6.1□□□□□ -1.43
HLA-N-201ENST00000437516 AQRO60306 1485 aaKnown RBP eCLIP6.1□□□□□ -1.43
HLA-N-201ENST00000437516 SOCS7O14512 581 aa6.1□□□□□ -1.43
HLA-N-201ENST00000437516 FAM50AQ14320 339 aaKnown RBP6.1□□□□□ -1.43
HLA-N-201ENST00000437516 SIN3AQ96ST3 1273 aa6.1□□□□□ -1.43
HLA-N-201ENST00000437516 DDX10Q13206 875 aaKnown RBP6.09□□□□□ -1.43
HLA-N-201ENST00000437516 WDR97A6NE52 1622 aa6.09□□□□□ -1.43
HLA-N-201ENST00000437516 EFCAB5A4FU69 1503 aa6.09□□□□□ -1.44
HLA-N-201ENST00000437516 FYCO1Q9BQS8 1478 aa6.09□□□□□ -1.44
HLA-N-201ENST00000437516 CASKIN1Q8WXD9 1431 aa6.08□□□□□ -1.44
HLA-N-201ENST00000437516 KCNH8Q96L42 1107 aa6.08□□□□□ -1.44
HLA-N-201ENST00000437516 PCF11O94913 1555 aaKnown RBP6.08□□□□□ -1.44
HLA-N-201ENST00000437516 ANP32CO43423 234 aa6.07□□□□□ -1.44
HLA-N-201ENST00000437516 ANP32EQ9BTT0 268 aa6.07□□□□□ -1.44
HLA-N-201ENST00000437516 ABCA10Q8WWZ4 1543 aa6.06□□□□□ -1.44
HLA-N-201ENST00000437516 NEFLP07196 543 aa6.06□□□□□ -1.44
HLA-N-201ENST00000437516 FKBP8Q14318 412 aa6.06□□□□□ -1.44
HLA-N-201ENST00000437516 P3H3Q8IVL6 736 aa6.06□□□□□ -1.44
HLA-N-201ENST00000437516 FANCD2Q9BXW9 1451 aa6.05□□□□□ -1.44
HLA-N-201ENST00000437516 ATP1B4Q9UN42 357 aaPredicted RBP6.05□□□□□ -1.44
HLA-N-201ENST00000437516 CC2D2AQ9P2K1 1620 aa6.05□□□□□ -1.44
HLA-N-201ENST00000437516 FHOD3Q2V2M9 1422 aa6.05□□□□□ -1.44
HLA-N-201ENST00000437516 FMN1Q68DA7 1419 aa6.05□□□□□ -1.44
HLA-N-201ENST00000437516 DNMBPQ6XZF7 1577 aa6.05□□□□□ -1.44
HLA-N-201ENST00000437516 TONSLQ96HA7 1378 aa6.05□□□□□ -1.44
HLA-N-201ENST00000437516 FGD6Q6ZV73 1430 aa6.04□□□□□ -1.44
HLA-N-201ENST00000437516 UACAQ9BZF9 1416 aa6.04□□□□□ -1.44
HLA-N-201ENST00000437516 CUL7Q14999 1698 aa6.04□□□□□ -1.44
HLA-N-201ENST00000437516 HFM1A2PYH4 1435 aa6.03□□□□□ -1.44
HLA-N-201ENST00000437516 BCANQ96GW7 911 aa6.03□□□□□ -1.44
HLA-N-201ENST00000437516 CCDC18Q5T9S5 1454 aa6.02□□□□□ -1.44
HLA-N-201ENST00000437516 TOPBP1Q92547 1522 aa6.02□□□□□ -1.45
HLA-N-201ENST00000437516 MTUS2Q5JR59 1369 aa6.02□□□□□ -1.45
HLA-N-201ENST00000437516 POLA1P09884 1462 aaPredicted RBP6.02□□□□□ -1.45
HLA-N-201ENST00000437516 SNAPC4Q5SXM2 1469 aa6.02□□□□□ -1.45
HLA-N-201ENST00000437516 RAD54L2Q9Y4B4 1467 aa6.02□□□□□ -1.45
HLA-N-201ENST00000437516 PTPN23Q9H3S7 1636 aa6.01□□□□□ -1.45
HLA-N-201ENST00000437516 THOC2Q8NI27 1593 aaKnown RBP6.01□□□□□ -1.45
HLA-N-201ENST00000437516 CTTNBP2Q8WZ74 1663 aa6.01□□□□□ -1.45
HLA-N-201ENST00000437516 NAIPQ13075 1403 aa6□□□□□ -1.45
HLA-N-201ENST00000437516 PTPRKQ15262 1439 aa6□□□□□ -1.45
HLA-N-201ENST00000437516 MYOM3Q5VTT5 1437 aa6□□□□□ -1.45
HLA-N-201ENST00000437516 HIRIP3Q9BW71 556 aaPredicted RBP6□□□□□ -1.45
HLA-N-201ENST00000437516 GRIN2BQ13224 1484 aa6□□□□□ -1.45
HLA-N-201ENST00000437516 EHBP1L1Q8N3D4 1523 aa5.99□□□□□ -1.45
HLA-N-201ENST00000437516 SAMD9Q5K651 1589 aa5.99□□□□□ -1.45
HLA-N-201ENST00000437516 TCOF1Q13428 1488 aaKnown RBP5.99□□□□□ -1.45
HLA-N-201ENST00000437516 NCOA2Q15596 1464 aa5.99□□□□□ -1.45
HLA-N-201ENST00000437516 ERICH6BQ5W0A0 696 aa5.99□□□□□ -1.45
HLA-N-201ENST00000437516 RBM19Q9Y4C8 960 aaKnown RBP5.99□□□□□ -1.45
HLA-N-201ENST00000437516 TRIM52Q96A61 297 aa5.98□□□□□ -1.45
HLA-N-201ENST00000437516 ARHGEF11O15085 1522 aa5.98□□□□□ -1.45
HLA-N-201ENST00000437516 AKNAQ7Z591 1439 aa5.98□□□□□ -1.45
HLA-N-201ENST00000437516 HSPA5P11021 654 aaKnown RBP5.97□□□□□ -1.45
HLA-N-201ENST00000437516 UGGT2Q9NYU1 1516 aa5.97□□□□□ -1.45
HLA-N-201ENST00000437516 KDM5BQ9UGL1 1544 aa5.97□□□□□ -1.45
HLA-N-201ENST00000437516 SUPT6HQ7KZ85 1726 aaKnown RBP5.96□□□□□ -1.45
HLA-N-201ENST00000437516 EIF4G2P78344 907 aaKnown RBP eCLIP5.96□□□□□ -1.46
HLA-N-201ENST00000437516 LMTK3Q96Q04 1460 aa5.96□□□□□ -1.46
HLA-N-201ENST00000437516 ABCA5Q8WWZ7 1642 aa5.96□□□□□ -1.46
HLA-N-201ENST00000437516 HNRNPUQ00839 825 aaKnown RBP eCLIP5.95□□□□□ -1.46
HLA-N-201ENST00000437516 MIA2Q96PC5 1412 aa5.95□□□□□ -1.46
HLA-N-201ENST00000437516 CNTLNQ9NXG0 1405 aa5.95□□□□□ -1.46
HLA-N-201ENST00000437516 CDK11AQ9UQ88 783 aaPredicted RBP5.95□□□□□ -1.46
HLA-N-201ENST00000437516 LAMC3Q9Y6N6 1575 aa5.95□□□□□ -1.46
HLA-N-201ENST00000437516 HECW1Q76N89 1606 aa5.95□□□□□ -1.46
HLA-N-201ENST00000437516 GAPVD1Q14C86 1478 aa5.95□□□□□ -1.46
HLA-N-201ENST00000437516 FANCIQ9NVI1 1328 aa5.95□□□□□ -1.46
HLA-N-201ENST00000437516 URB2Q14146 1524 aaKnown RBP5.94□□□□□ -1.46
HLA-N-201ENST00000437516 PPP4R2Q9NY27 417 aa5.94□□□□□ -1.46
HLA-N-201ENST00000437516 KIF21AQ7Z4S6 1674 aa5.94□□□□□ -1.46
HLA-N-201ENST00000437516 GCC2Q8IWJ2 1684 aa5.94□□□□□ -1.46
HLA-N-201ENST00000437516 WASHC2AQ641Q2 1341 aa5.94□□□□□ -1.46
HLA-N-201ENST00000437516 TDRD9Q8NDG6 1382 aaKnown RBP5.93□□□□□ -1.46
HLA-N-201ENST00000437516 NESP48681 1621 aa5.93□□□□□ -1.46
HLA-N-201ENST00000437516 MPHOSPH9Q99550 1183 aa5.93□□□□□ -1.46
HLA-N-201ENST00000437516 RRP7BPQ9NSQ0 103 aa5.93□□□□□ -1.46
HLA-N-201ENST00000437516 DENND4BO75064 1496 aaPredicted RBP5.93□□□□□ -1.46
HLA-N-201ENST00000437516 MAGI3Q5TCQ9 1506 aa5.93□□□□□ -1.46
HLA-N-201ENST00000437516 LRRIQ1Q96JM4 1722 aa5.92□□□□□ -1.46
HLA-N-201ENST00000437516 ROCK1Q13464 1354 aa5.92□□□□□ -1.46
HLA-N-201ENST00000437516 CCDC7Q96M83 1385 aa5.92□□□□□ -1.46
HLA-N-201ENST00000437516 NCOA1Q15788 1441 aa5.91□□□□□ -1.46
HLA-N-201ENST00000437516 PDS5BQ9NTI5 1447 aa5.91□□□□□ -1.46
HLA-N-201ENST00000437516 MSH5O43196 834 aa5.91□□□□□ -1.46
HLA-N-201ENST00000437516 ILDR2Q71H61 639 aa5.91□□□□□ -1.46
HLA-N-201ENST00000437516 L3MBTL2Q969R5 705 aa5.91□□□□□ -1.46
HLA-N-201ENST00000437516 PRKRIP1Q9H875 184 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms