RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 IFT140Q96RY7 1462 aa8.2□□□□□ -1.1
LINC01239-202ENST00000436786 TOPBP1Q92547 1522 aa8.2□□□□□ -1.1
LINC01239-202ENST00000436786 PITPNM1O00562 1244 aa8.19□□□□□ -1.1
LINC01239-202ENST00000436786 EVX2Q03828 476 aa8.18□□□□□ -1.1
LINC01239-202ENST00000436786 ABCC8Q09428 1581 aa8.16□□□□□ -1.1
LINC01239-202ENST00000436786 DNMBPQ6XZF7 1577 aa8.15□□□□□ -1.1
LINC01239-202ENST00000436786 RIMBP3CA6NJZ7 1639 aa8.14□□□□□ -1.11
LINC01239-202ENST00000436786 RIMBP3BA6NNM3 1639 aa8.14□□□□□ -1.11
LINC01239-202ENST00000436786 RIMBP3Q9UFD9 1639 aa8.14□□□□□ -1.11
LINC01239-202ENST00000436786 AQRO60306 1485 aaKnown RBP eCLIP8.13□□□□□ -1.11
LINC01239-202ENST00000436786 EIF4G3O43432 1585 aaKnown RBP8.13□□□□□ -1.11
LINC01239-202ENST00000436786 GABBR2O75899 941 aa8.12□□□□□ -1.11
LINC01239-202ENST00000436786 TARBP1Q13395 1621 aaKnown RBP8.12□□□□□ -1.11
LINC01239-202ENST00000436786 ARHGEF11O15085 1522 aa8.11□□□□□ -1.11
LINC01239-202ENST00000436786 POLA1P09884 1462 aaPredicted RBP8.11□□□□□ -1.11
LINC01239-202ENST00000436786 RAD54L2Q9Y4B4 1467 aa8.1□□□□□ -1.11
LINC01239-202ENST00000436786 FBLN2P98095 1184 aa8.1□□□□□ -1.11
LINC01239-202ENST00000436786 C19orf67A6NJJ6 358 aa8.09□□□□□ -1.11
LINC01239-202ENST00000436786 SOGA1O94964 1423 aa8.09□□□□□ -1.11
LINC01239-202ENST00000436786 TDRD9Q8NDG6 1382 aaKnown RBP8.09□□□□□ -1.12
LINC01239-202ENST00000436786 CYB5RLQ6IPT4 315 aa8.08□□□□□ -1.12
LINC01239-202ENST00000436786 CHD1O14646 1710 aa8.07□□□□□ -1.12
LINC01239-202ENST00000436786 PCDH10Q9P2E7 1040 aa8.07□□□□□ -1.12
LINC01239-202ENST00000436786 FGD5Q6ZNL6 1462 aa8.06□□□□□ -1.12
LINC01239-202ENST00000436786 CUX1P39880 1505 aa8.05□□□□□ -1.12
LINC01239-202ENST00000436786 SNAPC4Q5SXM2 1469 aa8.03□□□□□ -1.12
LINC01239-202ENST00000436786 ARAP1Q96P48 1450 aa8.03□□□□□ -1.12
LINC01239-202ENST00000436786 CLCN6P51797 869 aa8.03□□□□□ -1.12
LINC01239-202ENST00000436786 CHMP7Q8WUX9 453 aaPredicted RBP8.02□□□□□ -1.13
LINC01239-202ENST00000436786 PRKAR2AP13861 404 aaKnown RBP8.02□□□□□ -1.13
LINC01239-202ENST00000436786 SUPT5HO00267 1087 aaKnown RBP8.01□□□□□ -1.13
LINC01239-202ENST00000436786 MYCNP04198 464 aaPredicted RBP8.01□□□□□ -1.13
LINC01239-202ENST00000436786 WDR97A6NE52 1622 aa8.01□□□□□ -1.13
LINC01239-202ENST00000436786 GRIN2BQ13224 1484 aa8.01□□□□□ -1.13
LINC01239-202ENST00000436786 MAGI1Q96QZ7 1491 aaPredicted RBP8□□□□□ -1.13
LINC01239-202ENST00000436786 CLASP1Q7Z460 1538 aa8□□□□□ -1.13
LINC01239-202ENST00000436786 SYNJ2O15056 1496 aa7.98□□□□□ -1.13
LINC01239-202ENST00000436786 SYNJ1O43426 1573 aa7.98□□□□□ -1.13
LINC01239-202ENST00000436786 GAPVD1Q14C86 1478 aa7.97□□□□□ -1.13
LINC01239-202ENST00000436786 ABCA10Q8WWZ4 1543 aa7.96□□□□□ -1.14
LINC01239-202ENST00000436786 PBRM1Q86U86 1689 aa7.95□□□□□ -1.14
LINC01239-202ENST00000436786 ABCA5Q8WWZ7 1642 aa7.94□□□□□ -1.14
LINC01239-202ENST00000436786 SPDYE1Q8NFV5 336 aaPredicted RBP7.93□□□□□ -1.14
LINC01239-202ENST00000436786 WRNQ14191 1432 aaPredicted RBP eCLIP7.92□□□□□ -1.14
LINC01239-202ENST00000436786 POTEMA6NI47 508 aa7.91□□□□□ -1.14
LINC01239-202ENST00000436786 GRIN2AQ12879 1464 aa7.9□□□□□ -1.14
LINC01239-202ENST00000436786 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
LINC01239-202ENST00000436786 ERCC6L2Q5T890 1561 aa7.89□□□□□ -1.15
LINC01239-202ENST00000436786 BIVM-ERCC5R4GMW8 1640 aa7.89□□□□□ -1.15
LINC01239-202ENST00000436786 ADAMTS12P58397 1594 aa7.88□□□□□ -1.15
LINC01239-202ENST00000436786 CEP170Q5SW79 1584 aa7.88□□□□□ -1.15
LINC01239-202ENST00000436786 FHAD1B1AJZ9 1412 aa7.88□□□□□ -1.15
LINC01239-202ENST00000436786 NUP160Q12769 1436 aa7.88□□□□□ -1.15
LINC01239-202ENST00000436786 SPDYE2BA6NHP3 402 aa7.86□□□□□ -1.15
LINC01239-202ENST00000436786 SPDYE6P0CI01 402 aa7.86□□□□□ -1.15
LINC01239-202ENST00000436786 SPDYE2Q495Y8 402 aa7.86□□□□□ -1.15
LINC01239-202ENST00000436786 POTEGQ6S5H5 508 aa7.86□□□□□ -1.15
LINC01239-202ENST00000436786 DCBLD2Q96PD2 775 aa7.85□□□□□ -1.15
LINC01239-202ENST00000436786 ERICH3Q5RHP9 1530 aa7.85□□□□□ -1.15
LINC01239-202ENST00000436786 CLEC11AQ9Y240 323 aa7.84□□□□□ -1.15
LINC01239-202ENST00000436786 SHROOM2Q13796 1616 aa7.84□□□□□ -1.16
LINC01239-202ENST00000436786 POTEIP0CG38 1075 aa7.83□□□□□ -1.16
LINC01239-202ENST00000436786 PRG4Q92954 1404 aaPredicted RBP7.82□□□□□ -1.16
LINC01239-202ENST00000436786 JPH4Q96JJ6 628 aa7.82□□□□□ -1.16
LINC01239-202ENST00000436786 IGF1RP08069 1367 aa7.78□□□□□ -1.16
LINC01239-202ENST00000436786 RUSC2Q8N2Y8 1516 aa7.77□□□□□ -1.17
LINC01239-202ENST00000436786 KIF27Q86VH2 1401 aa7.75□□□□□ -1.17
LINC01239-202ENST00000436786 NPM1P06748 294 aaKnown RBP eCLIP7.75□□□□□ -1.17
LINC01239-202ENST00000436786 KIAA0586Q9BVV6 1533 aa7.74□□□□□ -1.17
LINC01239-202ENST00000436786 FAM69CQ0P6D2 419 aa7.74□□□□□ -1.17
LINC01239-202ENST00000436786 CD44P16070 742 aaKnown RBP7.73□□□□□ -1.17
LINC01239-202ENST00000436786 OTUD5Q96G74 571 aa7.73□□□□□ -1.17
LINC01239-202ENST00000436786 KIF13AQ9H1H9 1805 aa7.73□□□□□ -1.17
LINC01239-202ENST00000436786 ADCY10Q96PN6 1610 aa7.72□□□□□ -1.17
LINC01239-202ENST00000436786 ABCC10Q5T3U5 1492 aa7.72□□□□□ -1.17
LINC01239-202ENST00000436786 CUL7Q14999 1698 aa7.71□□□□□ -1.17
LINC01239-202ENST00000436786 CARMIL1Q5VZK9 1371 aa7.71□□□□□ -1.17
LINC01239-202ENST00000436786 MAPKBP1O60336 1514 aa7.71□□□□□ -1.18
LINC01239-202ENST00000436786 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
LINC01239-202ENST00000436786 PTPRGP23470 1445 aa7.69□□□□□ -1.18
LINC01239-202ENST00000436786 DIP2BQ9P265 1576 aa7.68□□□□□ -1.18
LINC01239-202ENST00000436786 TNIKQ9UKE5 1360 aa7.67□□□□□ -1.18
LINC01239-202ENST00000436786 PRR29P0C7W0 189 aa7.67□□□□□ -1.18
LINC01239-202ENST00000436786 CARMIL2Q6F5E8 1435 aa7.66□□□□□ -1.18
LINC01239-202ENST00000436786 CHADLQ6NUI6 762 aa7.66□□□□□ -1.18
LINC01239-202ENST00000436786 MAMSTRQ6ZN01 415 aa7.65□□□□□ -1.18
LINC01239-202ENST00000436786 IQGAP2Q13576 1575 aa7.65□□□□□ -1.18
LINC01239-202ENST00000436786 ABCC2Q92887 1545 aa7.64□□□□□ -1.19
LINC01239-202ENST00000436786 DISP1Q96F81 1524 aa7.63□□□□□ -1.19
LINC01239-202ENST00000436786 ASXL2Q76L83 1435 aa7.63□□□□□ -1.19
LINC01239-202ENST00000436786 KDM6BO15054 1643 aa7.63□□□□□ -1.19
LINC01239-202ENST00000436786 RAPGEF2Q9Y4G8 1499 aa7.63□□□□□ -1.19
LINC01239-202ENST00000436786 UACAQ9BZF9 1416 aa7.62□□□□□ -1.19
LINC01239-202ENST00000436786 UHRF1BP1LA0JNW5 1464 aa7.62□□□□□ -1.19
LINC01239-202ENST00000436786 TSPOAP1O95153 1857 aa7.62□□□□□ -1.19
LINC01239-202ENST00000436786 ZNF579Q8NAF0 562 aaKnown RBP7.62□□□□□ -1.19
LINC01239-202ENST00000436786 ATF5Q9Y2D1 282 aaPredicted RBP7.62□□□□□ -1.19
LINC01239-202ENST00000436786 PLB1Q6P1J6 1458 aa7.61□□□□□ -1.19
LINC01239-202ENST00000436786 KDM4FA0A1W2PPD8 638 aa7.61□□□□□ -1.19
LINC01239-202ENST00000436786 UGGT2Q9NYU1 1516 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms