RNA–Protein interactions for RNA: ENST00000429804.7

CTCFL-207, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-207ENST00000429804 HIRIP3Q9BW71 556 aaPredicted RBP15.45■□□□□ 0.06
CTCFL-207ENST00000429804 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
CTCFL-207ENST00000429804 BCANQ96GW7 911 aa15.42■□□□□ 0.06
CTCFL-207ENST00000429804 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
CTCFL-207ENST00000429804 SUPT16HQ9Y5B9 1047 aaKnown RBP15.41■□□□□ 0.06
CTCFL-207ENST00000429804 KCNH8Q96L42 1107 aa15.4■□□□□ 0.06
CTCFL-207ENST00000429804 NESP48681 1621 aa15.39■□□□□ 0.05
CTCFL-207ENST00000429804 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
CTCFL-207ENST00000429804 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
CTCFL-207ENST00000429804 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
CTCFL-207ENST00000429804 FHOD3Q2V2M9 1422 aa15.36■□□□□ 0.05
CTCFL-207ENST00000429804 NEFLP07196 543 aa15.34■□□□□ 0.05
CTCFL-207ENST00000429804 LRRC9Q6ZRR7 1453 aa15.34■□□□□ 0.05
CTCFL-207ENST00000429804 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
CTCFL-207ENST00000429804 ANP32CO43423 234 aa15.33■□□□□ 0.04
CTCFL-207ENST00000429804 DNAJC5BQ9UF47 199 aa15.32■□□□□ 0.04
CTCFL-207ENST00000429804 TIAM1Q13009 1591 aa15.32■□□□□ 0.04
CTCFL-207ENST00000429804 MTUS2Q5JR59 1369 aa15.31■□□□□ 0.04
CTCFL-207ENST00000429804 TDRD9Q8NDG6 1382 aaKnown RBP15.3■□□□□ 0.04
CTCFL-207ENST00000429804 TONSLQ96HA7 1378 aa15.3■□□□□ 0.04
CTCFL-207ENST00000429804 TOPBP1Q92547 1522 aa15.29■□□□□ 0.04
CTCFL-207ENST00000429804 FKBP8Q14318 412 aa15.29■□□□□ 0.04
CTCFL-207ENST00000429804 TRIM52Q96A61 297 aa15.29■□□□□ 0.04
CTCFL-207ENST00000429804 ARID3CA6NKF2 412 aa15.28■□□□□ 0.04
CTCFL-207ENST00000429804 DNMBPQ6XZF7 1577 aa15.27■□□□□ 0.03
CTCFL-207ENST00000429804 POLA1P09884 1462 aaPredicted RBP15.26■□□□□ 0.03
CTCFL-207ENST00000429804 CHIC2Q9UKJ5 165 aa15.25■□□□□ 0.03
CTCFL-207ENST00000429804 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
CTCFL-207ENST00000429804 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
CTCFL-207ENST00000429804 PPP1R15AO75807 674 aaPredicted RBP15.24■□□□□ 0.03
CTCFL-207ENST00000429804 MAPKBP1O60336 1514 aa15.23■□□□□ 0.03
CTCFL-207ENST00000429804 TIMELESSQ9UNS1 1208 aa15.21■□□□□ 0.03
CTCFL-207ENST00000429804 RRP7BPQ9NSQ0 103 aa15.21■□□□□ 0.03
CTCFL-207ENST00000429804 WDR97A6NE52 1622 aa15.21■□□□□ 0.02
CTCFL-207ENST00000429804 MAP3K1Q13233 1512 aa15.2■□□□□ 0.02
CTCFL-207ENST00000429804 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
CTCFL-207ENST00000429804 PCF11O94913 1555 aaKnown RBP15.2■□□□□ 0.02
CTCFL-207ENST00000429804 FMN1Q68DA7 1419 aa15.18■□□□□ 0.02
CTCFL-207ENST00000429804 GAPVD1Q14C86 1478 aa15.16■□□□□ 0.02
CTCFL-207ENST00000429804 CASKIN1Q8WXD9 1431 aa15.16■□□□□ 0.02
CTCFL-207ENST00000429804 TSHZ2Q9NRE2 1034 aa15.16■□□□□ 0.02
CTCFL-207ENST00000429804 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
CTCFL-207ENST00000429804 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
CTCFL-207ENST00000429804 FGD6Q6ZV73 1430 aa15.14■□□□□ 0.01
CTCFL-207ENST00000429804 FBLN2P98095 1184 aa15.14■□□□□ 0.01
CTCFL-207ENST00000429804 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
CTCFL-207ENST00000429804 HNRNPUQ00839 825 aaKnown RBP eCLIP15.11■□□□□ 0.01
CTCFL-207ENST00000429804 BCL11AQ9H165 835 aa15.11■□□□□ 0.01
CTCFL-207ENST00000429804 CCDC18Q5T9S5 1454 aa15.11■□□□□ 0.01
CTCFL-207ENST00000429804 CCER2I3L3R5 266 aa15.1■□□□□ 0.01
CTCFL-207ENST00000429804 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
CTCFL-207ENST00000429804 EFCAB5A4FU69 1503 aa15.08■□□□□ 0
CTCFL-207ENST00000429804 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
CTCFL-207ENST00000429804 IRX6P78412 446 aaPredicted RBP15.05■□□□□ -0
CTCFL-207ENST00000429804 CHMP7Q8WUX9 453 aaPredicted RBP15.04■□□□□ -0
CTCFL-207ENST00000429804 FOXD1Q16676 465 aa15.04■□□□□ -0
CTCFL-207ENST00000429804 CFAP43Q8NDM7 1665 aa15.04■□□□□ -0
CTCFL-207ENST00000429804 UACAQ9BZF9 1416 aa15.04■□□□□ -0
CTCFL-207ENST00000429804 AQRO60306 1485 aaKnown RBP eCLIP15.04■□□□□ -03e-6■■■□□ 17.6
CTCFL-207ENST00000429804 NCOA2Q15596 1464 aa15.04■□□□□ -0
CTCFL-207ENST00000429804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.04■□□□□ -0
CTCFL-207ENST00000429804 MRC2Q9UBG0 1479 aa15.03■□□□□ -0
CTCFL-207ENST00000429804 CUL7Q14999 1698 aa15.03■□□□□ -0
CTCFL-207ENST00000429804 EIF4G2P78344 907 aaKnown RBP eCLIP15.03■□□□□ -0
CTCFL-207ENST00000429804 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
CTCFL-207ENST00000429804 HSPA5P11021 654 aaKnown RBP15.02■□□□□ -0
CTCFL-207ENST00000429804 PTPRKQ15262 1439 aa15.02□□□□□ -0.01
CTCFL-207ENST00000429804 HFM1A2PYH4 1435 aa15.01□□□□□ -0.01
CTCFL-207ENST00000429804 ZNF326Q5BKZ1 582 aaKnown RBP14.99□□□□□ -0.01
CTCFL-207ENST00000429804 FAM9BQ8IZU0 186 aa14.99□□□□□ -0.01
CTCFL-207ENST00000429804 NAIPQ13075 1403 aa14.98□□□□□ -0.01
CTCFL-207ENST00000429804 MPHOSPH9Q99550 1183 aa14.97□□□□□ -0.01
CTCFL-207ENST00000429804 ZNF777Q9ULD5 760 aaPredicted RBP14.96□□□□□ -0.01
CTCFL-207ENST00000429804 KIF21AQ7Z4S6 1674 aa14.96□□□□□ -0.02
CTCFL-207ENST00000429804 GRIN2BQ13224 1484 aa14.95□□□□□ -0.02
CTCFL-207ENST00000429804 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
CTCFL-207ENST00000429804 CDK11AQ9UQ88 783 aaPredicted RBP14.95□□□□□ -0.02
CTCFL-207ENST00000429804 SNAPC4Q5SXM2 1469 aa14.95□□□□□ -0.02
CTCFL-207ENST00000429804 SLC4A1APQ9BWU0 796 aaKnown RBP14.95□□□□□ -0.02
CTCFL-207ENST00000429804 ANP32EQ9BTT0 268 aa14.94□□□□□ -0.02
CTCFL-207ENST00000429804 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
CTCFL-207ENST00000429804 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
CTCFL-207ENST00000429804 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
CTCFL-207ENST00000429804 PTPN23Q9H3S7 1636 aa14.92□□□□□ -0.02
CTCFL-207ENST00000429804 RBM19Q9Y4C8 960 aaKnown RBP14.92□□□□□ -0.02
CTCFL-207ENST00000429804 WASHC2AQ641Q2 1341 aa14.92□□□□□ -0.02
CTCFL-207ENST00000429804 ERICH6Q7L0X2 663 aa14.91□□□□□ -0.02
CTCFL-207ENST00000429804 EHBP1L1Q8N3D4 1523 aa14.89□□□□□ -0.03
CTCFL-207ENST00000429804 SUPT6HQ7KZ85 1726 aaKnown RBP14.89□□□□□ -0.03
CTCFL-207ENST00000429804 ABCA5Q8WWZ7 1642 aa14.88□□□□□ -0.03
CTCFL-207ENST00000429804 ZNF644Q9H582 1327 aaPredicted RBP14.87□□□□□ -0.03
CTCFL-207ENST00000429804 ZNF608Q9ULD9 1512 aaPredicted RBP14.85□□□□□ -0.03
CTCFL-207ENST00000429804 SENP3-EIF4A1A0A087X0R7 540 aa14.84□□□□□ -0.03
CTCFL-207ENST00000429804 CFDP1Q9UEE9 299 aaPredicted RBP14.84□□□□□ -0.03
CTCFL-207ENST00000429804 CDK13Q14004 1512 aaKnown RBP14.84□□□□□ -0.03
CTCFL-207ENST00000429804 CCDC184Q52MB2 194 aa14.84□□□□□ -0.03
CTCFL-207ENST00000429804 TARBP1Q13395 1621 aaKnown RBP14.82□□□□□ -0.04
CTCFL-207ENST00000429804 EPRSP07814 1512 aaKnown RBP14.81□□□□□ -0.04
CTCFL-207ENST00000429804 UGGT2Q9NYU1 1516 aa14.81□□□□□ -0.04
CTCFL-207ENST00000429804 PRKRIP1Q9H875 184 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms