RNA–Protein interactions for RNA: ENST00000429104.1

LINC00843-201, long intergenic non-protein coding RNA 843, humanhuman

TSL 5

Gene LINC00843, Length 562 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00843-201ENST00000429104 FXR2P51116 673 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00843-201ENST00000429104 FBLN2P98095 1184 aa12.45□□□□□ -0.42
LINC00843-201ENST00000429104 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
LINC00843-201ENST00000429104 DNAJC5Q9H3Z4 198 aa12.43□□□□□ -0.42
LINC00843-201ENST00000429104 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
LINC00843-201ENST00000429104 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
LINC00843-201ENST00000429104 SPDYE2Q495Y8 402 aa12.41□□□□□ -0.42
LINC00843-201ENST00000429104 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
LINC00843-201ENST00000429104 SUPT5HO00267 1087 aaKnown RBP12.28□□□□□ -0.44
LINC00843-201ENST00000429104 SPDYE1Q8NFV5 336 aaPredicted RBP12.28□□□□□ -0.44
LINC00843-201ENST00000429104 TOPBP1Q92547 1522 aa12.27□□□□□ -0.44
LINC00843-201ENST00000429104 DNMBPQ6XZF7 1577 aa12.27□□□□□ -0.44
LINC00843-201ENST00000429104 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
LINC00843-201ENST00000429104 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
LINC00843-201ENST00000429104 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
LINC00843-201ENST00000429104 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
LINC00843-201ENST00000429104 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
LINC00843-201ENST00000429104 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.46
LINC00843-201ENST00000429104 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
LINC00843-201ENST00000429104 EVX2Q03828 476 aa12.17□□□□□ -0.46
LINC00843-201ENST00000429104 TARBP1Q13395 1621 aaKnown RBP12.16□□□□□ -0.46
LINC00843-201ENST00000429104 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
LINC00843-201ENST00000429104 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
LINC00843-201ENST00000429104 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
LINC00843-201ENST00000429104 CHD1O14646 1710 aa12.14□□□□□ -0.47
LINC00843-201ENST00000429104 CUX1P39880 1505 aa12.12□□□□□ -0.47
LINC00843-201ENST00000429104 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
LINC00843-201ENST00000429104 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
LINC00843-201ENST00000429104 AQRO60306 1485 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00843-201ENST00000429104 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
LINC00843-201ENST00000429104 SOGA1O94964 1423 aa12.09□□□□□ -0.47
LINC00843-201ENST00000429104 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
LINC00843-201ENST00000429104 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
LINC00843-201ENST00000429104 PBRM1Q86U86 1689 aa12.06□□□□□ -0.48
LINC00843-201ENST00000429104 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
LINC00843-201ENST00000429104 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
LINC00843-201ENST00000429104 RIMBP3CA6NJZ7 1639 aa12.03□□□□□ -0.48
LINC00843-201ENST00000429104 RIMBP3BA6NNM3 1639 aa12.03□□□□□ -0.48
LINC00843-201ENST00000429104 RIMBP3Q9UFD9 1639 aa12.03□□□□□ -0.48
LINC00843-201ENST00000429104 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.48
LINC00843-201ENST00000429104 BIVM-ERCC5R4GMW8 1640 aa12.01□□□□□ -0.49
LINC00843-201ENST00000429104 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
LINC00843-201ENST00000429104 SYNJ1O43426 1573 aa11.99□□□□□ -0.49
LINC00843-201ENST00000429104 TOP2BQ02880 1626 aa11.99□□□□□ -0.49
LINC00843-201ENST00000429104 GRIN2BQ13224 1484 aa11.98□□□□□ -0.49
LINC00843-201ENST00000429104 ABCA5Q8WWZ7 1642 aa11.97□□□□□ -0.49
LINC00843-201ENST00000429104 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
LINC00843-201ENST00000429104 ARHGEF11O15085 1522 aa11.96□□□□□ -0.49
LINC00843-201ENST00000429104 GAPVD1Q14C86 1478 aa11.96□□□□□ -0.49
LINC00843-201ENST00000429104 MAGI1Q96QZ7 1491 aaPredicted RBP11.96□□□□□ -0.49
LINC00843-201ENST00000429104 GABBR2O75899 941 aa11.96□□□□□ -0.49
LINC00843-201ENST00000429104 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
LINC00843-201ENST00000429104 CHMP7Q8WUX9 453 aaPredicted RBP11.94□□□□□ -0.5
LINC00843-201ENST00000429104 SYNJ2O15056 1496 aa11.92□□□□□ -0.5
LINC00843-201ENST00000429104 ADAMTS12P58397 1594 aa11.89□□□□□ -0.51
LINC00843-201ENST00000429104 CLASP1Q7Z460 1538 aa11.89□□□□□ -0.51
LINC00843-201ENST00000429104 ARAP1Q96P48 1450 aa11.84□□□□□ -0.51
LINC00843-201ENST00000429104 LHX8Q68G74 356 aa11.84□□□□□ -0.51
LINC00843-201ENST00000429104 CYB5RLQ6IPT4 315 aa11.84□□□□□ -0.51
LINC00843-201ENST00000429104 GRIN2AQ12879 1464 aa11.83□□□□□ -0.52
LINC00843-201ENST00000429104 ERICH3Q5RHP9 1530 aa11.83□□□□□ -0.52
LINC00843-201ENST00000429104 CD44P16070 742 aaKnown RBP11.83□□□□□ -0.52
LINC00843-201ENST00000429104 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
LINC00843-201ENST00000429104 CEP170Q5SW79 1584 aa11.81□□□□□ -0.52
LINC00843-201ENST00000429104 FHAD1B1AJZ9 1412 aa11.8□□□□□ -0.52
LINC00843-201ENST00000429104 CLCN6P51797 869 aa11.79□□□□□ -0.52
LINC00843-201ENST00000429104 CUL7Q14999 1698 aa11.75□□□□□ -0.53
LINC00843-201ENST00000429104 NUP160Q12769 1436 aa11.74□□□□□ -0.53
LINC00843-201ENST00000429104 ERCC6L2Q5T890 1561 aa11.73□□□□□ -0.53
LINC00843-201ENST00000429104 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
LINC00843-201ENST00000429104 SHROOM2Q13796 1616 aa11.72□□□□□ -0.53
LINC00843-201ENST00000429104 RUSC2Q8N2Y8 1516 aa11.72□□□□□ -0.53
LINC00843-201ENST00000429104 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
LINC00843-201ENST00000429104 CSRNP3Q8WYN3 585 aa11.68□□□□□ -0.54
LINC00843-201ENST00000429104 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
LINC00843-201ENST00000429104 PRG4Q92954 1404 aaPredicted RBP11.65□□□□□ -0.54
LINC00843-201ENST00000429104 POTEIP0CG38 1075 aa11.64□□□□□ -0.55
LINC00843-201ENST00000429104 IGF1RP08069 1367 aa11.64□□□□□ -0.55
LINC00843-201ENST00000429104 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
LINC00843-201ENST00000429104 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
LINC00843-201ENST00000429104 JPH4Q96JJ6 628 aa11.61□□□□□ -0.55
LINC00843-201ENST00000429104 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
LINC00843-201ENST00000429104 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
LINC00843-201ENST00000429104 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
LINC00843-201ENST00000429104 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
LINC00843-201ENST00000429104 IQGAP2Q13576 1575 aa11.58□□□□□ -0.55
LINC00843-201ENST00000429104 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.56
LINC00843-201ENST00000429104 PAK3O75914 559 aaPredicted RBP11.56□□□□□ -0.56
LINC00843-201ENST00000429104 SPDYE4A6NLX3 237 aa11.55□□□□□ -0.56
LINC00843-201ENST00000429104 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
LINC00843-201ENST00000429104 KIF13AQ9H1H9 1805 aa11.55□□□□□ -0.56
LINC00843-201ENST00000429104 ADCY10Q96PN6 1610 aa11.54□□□□□ -0.56
LINC00843-201ENST00000429104 CARMIL2Q6F5E8 1435 aa11.52□□□□□ -0.56
LINC00843-201ENST00000429104 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC00843-201ENST00000429104 TSPOAP1O95153 1857 aa11.49□□□□□ -0.57
LINC00843-201ENST00000429104 PTPRGP23470 1445 aa11.48□□□□□ -0.57
LINC00843-201ENST00000429104 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
LINC00843-201ENST00000429104 TNIKQ9UKE5 1360 aa11.46□□□□□ -0.57
LINC00843-201ENST00000429104 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.57
LINC00843-201ENST00000429104 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms