RNA–Protein interactions for RNA: ENST00000428963.6

CENPN-204, Transcript of centromere protein N, humanhuman

TSL 2 BASIC

Gene CENPN, Length 971 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-204ENST00000428963 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
CENPN-204ENST00000428963 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
CENPN-204ENST00000428963 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
CENPN-204ENST00000428963 EVX2Q03828 476 aa14.54□□□□□ -0.08
CENPN-204ENST00000428963 PDS5BQ9NTI5 1447 aa14.54□□□□□ -0.08
CENPN-204ENST00000428963 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
CENPN-204ENST00000428963 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
CENPN-204ENST00000428963 C19orf67A6NJJ6 358 aa14.47□□□□□ -0.09
CENPN-204ENST00000428963 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
CENPN-204ENST00000428963 WIZO95785 1651 aa14.43□□□□□ -0.1
CENPN-204ENST00000428963 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
CENPN-204ENST00000428963 WDR62O43379 1518 aa14.42□□□□□ -0.1
CENPN-204ENST00000428963 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
CENPN-204ENST00000428963 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
CENPN-204ENST00000428963 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
CENPN-204ENST00000428963 CFTRP13569 1480 aa14.27□□□□□ -0.12
CENPN-204ENST00000428963 URB2Q14146 1524 aaKnown RBP14.25□□□□□ -0.13
CENPN-204ENST00000428963 GABBR2O75899 941 aa14.25□□□□□ -0.13
CENPN-204ENST00000428963 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
CENPN-204ENST00000428963 STAG3Q9UJ98 1225 aa14.21□□□□□ -0.13
CENPN-204ENST00000428963 RSF1Q96T23 1441 aaPredicted RBP14.21□□□□□ -0.13
CENPN-204ENST00000428963 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
CENPN-204ENST00000428963 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
CENPN-204ENST00000428963 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
CENPN-204ENST00000428963 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
CENPN-204ENST00000428963 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
CENPN-204ENST00000428963 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
CENPN-204ENST00000428963 ZNF608Q9ULD9 1512 aaPredicted RBP14.14□□□□□ -0.15
CENPN-204ENST00000428963 CLCN6P51797 869 aa14.11□□□□□ -0.15
CENPN-204ENST00000428963 CREBZFQ9NS37 354 aa14.09□□□□□ -0.15
CENPN-204ENST00000428963 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
CENPN-204ENST00000428963 PRDM2Q13029 1718 aa14.06□□□□□ -0.16
CENPN-204ENST00000428963 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
CENPN-204ENST00000428963 ARHGEF11O15085 1522 aa14.05□□□□□ -0.16
CENPN-204ENST00000428963 TOPBP1Q92547 1522 aa14.04□□□□□ -0.16
CENPN-204ENST00000428963 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
CENPN-204ENST00000428963 ZNF579Q8NAF0 562 aaKnown RBP13.99□□□□□ -0.17
CENPN-204ENST00000428963 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
CENPN-204ENST00000428963 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.173e-7■■■■■ 34.7
CENPN-204ENST00000428963 LHX8Q68G74 356 aa13.96□□□□□ -0.17
CENPN-204ENST00000428963 ZRANB1Q9UGI0 708 aa13.96□□□□□ -0.17
CENPN-204ENST00000428963 CHD1O14646 1710 aa13.94□□□□□ -0.18
CENPN-204ENST00000428963 ARAP1Q96P48 1450 aa13.93□□□□□ -0.18
CENPN-204ENST00000428963 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
CENPN-204ENST00000428963 POTEIP0CG38 1075 aa13.93□□□□□ -0.18
CENPN-204ENST00000428963 TARBP1Q13395 1621 aaKnown RBP13.93□□□□□ -0.18
CENPN-204ENST00000428963 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
CENPN-204ENST00000428963 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
CENPN-204ENST00000428963 POLA1P09884 1462 aaPredicted RBP13.87□□□□□ -0.19
CENPN-204ENST00000428963 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
CENPN-204ENST00000428963 NPM1P06748 294 aaKnown RBP eCLIP13.87□□□□□ -0.19
CENPN-204ENST00000428963 PROM2Q8N271 834 aa13.86□□□□□ -0.19
CENPN-204ENST00000428963 DCBLD2Q96PD2 775 aa13.86□□□□□ -0.19
CENPN-204ENST00000428963 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
CENPN-204ENST00000428963 MNX1P50219 401 aaPredicted RBP13.84□□□□□ -0.19
CENPN-204ENST00000428963 SOGA1O94964 1423 aa13.81□□□□□ -0.2
CENPN-204ENST00000428963 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
CENPN-204ENST00000428963 CLASP1Q7Z460 1538 aa13.78□□□□□ -0.2
CENPN-204ENST00000428963 GALR2O43603 387 aaPredicted RBP13.77□□□□□ -0.21
CENPN-204ENST00000428963 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
CENPN-204ENST00000428963 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
CENPN-204ENST00000428963 PHF12Q96QT6 1004 aa13.73□□□□□ -0.21
CENPN-204ENST00000428963 CUX1P39880 1505 aa13.73□□□□□ -0.21
CENPN-204ENST00000428963 SYNJ1O43426 1573 aa13.7□□□□□ -0.22
CENPN-204ENST00000428963 MAGI1Q96QZ7 1491 aaPredicted RBP13.69□□□□□ -0.22
CENPN-204ENST00000428963 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
CENPN-204ENST00000428963 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
CENPN-204ENST00000428963 SYNJ2O15056 1496 aa13.67□□□□□ -0.22
CENPN-204ENST00000428963 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
CENPN-204ENST00000428963 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
CENPN-204ENST00000428963 ERCC6L2Q5T890 1561 aa13.62□□□□□ -0.23
CENPN-204ENST00000428963 PLEKHG5O94827 1062 aa13.59□□□□□ -0.23
CENPN-204ENST00000428963 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
CENPN-204ENST00000428963 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
CENPN-204ENST00000428963 MS4A3Q96HJ5 214 aa13.56□□□□□ -0.24
CENPN-204ENST00000428963 TSPYL2Q9H2G4 693 aaPredicted RBP13.55□□□□□ -0.24
CENPN-204ENST00000428963 CCDC61Q9Y6R9 512 aa13.54□□□□□ -0.24
CENPN-204ENST00000428963 ASTLQ6HA08 431 aaPredicted RBP13.53□□□□□ -0.24
CENPN-204ENST00000428963 MIER1Q8N108 512 aa13.53□□□□□ -0.24
CENPN-204ENST00000428963 GRIN2AQ12879 1464 aa13.52□□□□□ -0.25
CENPN-204ENST00000428963 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
CENPN-204ENST00000428963 PELP1Q8IZL8 1130 aaKnown RBP13.5□□□□□ -0.25
CENPN-204ENST00000428963 NUP160Q12769 1436 aa13.49□□□□□ -0.25
CENPN-204ENST00000428963 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
CENPN-204ENST00000428963 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
CENPN-204ENST00000428963 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
CENPN-204ENST00000428963 SHROOM2Q13796 1616 aa13.46□□□□□ -0.26
CENPN-204ENST00000428963 SLC39A7Q92504 469 aa13.45□□□□□ -0.26
CENPN-204ENST00000428963 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
CENPN-204ENST00000428963 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
CENPN-204ENST00000428963 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
CENPN-204ENST00000428963 FHAD1B1AJZ9 1412 aa13.43□□□□□ -0.26
CENPN-204ENST00000428963 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
CENPN-204ENST00000428963 C7P10643 843 aa13.43□□□□□ -0.26
CENPN-204ENST00000428963 METRNQ9UJH8 293 aa13.43□□□□□ -0.26
CENPN-204ENST00000428963 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
CENPN-204ENST00000428963 RASEFQ8IZ41 740 aa13.42□□□□□ -0.26
CENPN-204ENST00000428963 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
CENPN-204ENST00000428963 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
CENPN-204ENST00000428963 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms