RNA–Protein interactions for RNA: ENST00000427995.5

LINC00854-201, Long intergenic non-protein coding RNA 854, humanhuman

TSL 3

Gene LINC00854, Length 912 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-201ENST00000427995 ERCC6Q03468 1493 aa8.24□□□□□ -1.09
LINC00854-201ENST00000427995 SUPT16HQ9Y5B9 1047 aaKnown RBP8.22□□□□□ -1.09
LINC00854-201ENST00000427995 PDS5BQ9NTI5 1447 aa8.21□□□□□ -1.09
LINC00854-201ENST00000427995 CUX2O14529 1486 aa8.21□□□□□ -1.09
LINC00854-201ENST00000427995 FANCD2Q9BXW9 1451 aa8.21□□□□□ -1.09
LINC00854-201ENST00000427995 WDR62O43379 1518 aa8.21□□□□□ -1.1
LINC00854-201ENST00000427995 SLC4A2P04920 1241 aa8.21□□□□□ -1.1
LINC00854-201ENST00000427995 MIER1Q8N108 512 aa8.21□□□□□ -1.1
LINC00854-201ENST00000427995 CEP164Q9UPV0 1460 aa8.2□□□□□ -1.1
LINC00854-201ENST00000427995 SLC24A1O60721 1099 aa8.19□□□□□ -1.1
LINC00854-201ENST00000427995 ERICH6Q7L0X2 663 aa8.19□□□□□ -1.1
LINC00854-201ENST00000427995 MRC2Q9UBG0 1479 aa8.19□□□□□ -1.1
LINC00854-201ENST00000427995 URB2Q14146 1524 aaKnown RBP8.19□□□□□ -1.1
LINC00854-201ENST00000427995 CAPN15O75808 1086 aa8.18□□□□□ -1.1
LINC00854-201ENST00000427995 NEFLP07196 543 aa8.17□□□□□ -1.1
LINC00854-201ENST00000427995 TSHZ2Q9NRE2 1034 aa8.17□□□□□ -1.1
LINC00854-201ENST00000427995 VPS8Q8N3P4 1428 aa8.17□□□□□ -1.1
LINC00854-201ENST00000427995 DSG3P32926 999 aa8.15□□□□□ -1.1
LINC00854-201ENST00000427995 APLP2Q06481 763 aa8.15□□□□□ -1.1
LINC00854-201ENST00000427995 FOXD4L1Q9NU39 408 aa8.15□□□□□ -1.1
LINC00854-201ENST00000427995 TOPBP1Q92547 1522 aa8.11□□□□□ -1.11
LINC00854-201ENST00000427995 CLIP1P30622 1438 aa8.11□□□□□ -1.11
LINC00854-201ENST00000427995 ABCC8Q09428 1581 aa8.1□□□□□ -1.11
LINC00854-201ENST00000427995 DNMBPQ6XZF7 1577 aa8.1□□□□□ -1.11
LINC00854-201ENST00000427995 RTN4Q9NQC3 1192 aaKnown RBP8.1□□□□□ -1.11
LINC00854-201ENST00000427995 SPINK5Q9NQ38 1064 aaPredicted RBP8.09□□□□□ -1.11
LINC00854-201ENST00000427995 CUX1P39880 1505 aa8.08□□□□□ -1.12
LINC00854-201ENST00000427995 UBTFP17480 764 aaKnown RBP8.08□□□□□ -1.12
LINC00854-201ENST00000427995 TARBP1Q13395 1621 aaKnown RBP8.07□□□□□ -1.12
LINC00854-201ENST00000427995 ERICH3Q5RHP9 1530 aa8.07□□□□□ -1.12
LINC00854-201ENST00000427995 AMER1Q5JTC6 1135 aaPredicted RBP8.06□□□□□ -1.12
LINC00854-201ENST00000427995 DHX57Q6P158 1386 aaKnown RBP8.06□□□□□ -1.12
LINC00854-201ENST00000427995 FANCIQ9NVI1 1328 aa8.05□□□□□ -1.12
LINC00854-201ENST00000427995 WDR97A6NE52 1622 aa8.05□□□□□ -1.12
LINC00854-201ENST00000427995 POLA1P09884 1462 aaPredicted RBP8.05□□□□□ -1.12
LINC00854-201ENST00000427995 ERICH6BQ5W0A0 696 aa8.04□□□□□ -1.12
LINC00854-201ENST00000427995 SOGA1O94964 1423 aa8.03□□□□□ -1.12
LINC00854-201ENST00000427995 ZNF608Q9ULD9 1512 aaPredicted RBP8.03□□□□□ -1.12
LINC00854-201ENST00000427995 BIVM-ERCC5R4GMW8 1640 aa8.03□□□□□ -1.12
LINC00854-201ENST00000427995 SYNJ1O43426 1573 aa8.03□□□□□ -1.12
LINC00854-201ENST00000427995 U3KPZ7 1027 aaPredicted RBP8.03□□□□□ -1.12
LINC00854-201ENST00000427995 RRBP1Q9P2E9 1410 aaKnown RBP8.03□□□□□ -1.12
LINC00854-201ENST00000427995 EIF4G3O43432 1585 aaKnown RBP8.02□□□□□ -1.13
LINC00854-201ENST00000427995 CCER2I3L3R5 266 aa8.02□□□□□ -1.13
LINC00854-201ENST00000427995 HNRNPUL2Q1KMD3 747 aaKnown RBP8.02□□□□□ -1.13
LINC00854-201ENST00000427995 FGD5Q6ZNL6 1462 aa8.01□□□□□ -1.13
LINC00854-201ENST00000427995 IFT140Q96RY7 1462 aa8.01□□□□□ -1.13
LINC00854-201ENST00000427995 TOP2BQ02880 1626 aa8□□□□□ -1.13
LINC00854-201ENST00000427995 TIMELESSQ9UNS1 1208 aa8□□□□□ -1.13
LINC00854-201ENST00000427995 RAD54L2Q9Y4B4 1467 aa8□□□□□ -1.13
LINC00854-201ENST00000427995 RBM19Q9Y4C8 960 aaKnown RBP7.99□□□□□ -1.13
LINC00854-201ENST00000427995 CDK11AQ9UQ88 783 aaPredicted RBP7.98□□□□□ -1.13
LINC00854-201ENST00000427995 ABCA5Q8WWZ7 1642 aa7.97□□□□□ -1.13
LINC00854-201ENST00000427995 FKBP8Q14318 412 aa7.97□□□□□ -1.13
LINC00854-201ENST00000427995 MAP3K1Q13233 1512 aa7.97□□□□□ -1.13
LINC00854-201ENST00000427995 PBRM1Q86U86 1689 aa7.95□□□□□ -1.14
LINC00854-201ENST00000427995 ABCA10Q8WWZ4 1543 aa7.94□□□□□ -1.14
LINC00854-201ENST00000427995 CCNB3Q8WWL7 1395 aa7.94□□□□□ -1.14
LINC00854-201ENST00000427995 AQRO60306 1485 aaKnown RBP eCLIP7.94□□□□□ -1.14
LINC00854-201ENST00000427995 ANP32CO43423 234 aa7.93□□□□□ -1.14
LINC00854-201ENST00000427995 PRKCSHP14314 528 aaPredicted RBP7.93□□□□□ -1.14
LINC00854-201ENST00000427995 TRHP20396 242 aaPredicted RBP7.93□□□□□ -1.14
LINC00854-201ENST00000427995 CHD1O14646 1710 aa7.92□□□□□ -1.14
LINC00854-201ENST00000427995 ABCB7O75027 752 aa7.92□□□□□ -1.14
LINC00854-201ENST00000427995 ATF5Q9Y2D1 282 aaPredicted RBP7.92□□□□□ -1.14
LINC00854-201ENST00000427995 RUSC2Q8N2Y8 1516 aa7.92□□□□□ -1.14
LINC00854-201ENST00000427995 TDRD9Q8NDG6 1382 aaKnown RBP7.91□□□□□ -1.14
LINC00854-201ENST00000427995 ARAP1Q96P48 1450 aa7.9□□□□□ -1.14
LINC00854-201ENST00000427995 RAPGEF2Q9Y4G8 1499 aa7.9□□□□□ -1.14
LINC00854-201ENST00000427995 MYCNP04198 464 aaPredicted RBP7.9□□□□□ -1.14
LINC00854-201ENST00000427995 SNAPC4Q5SXM2 1469 aa7.89□□□□□ -1.15
LINC00854-201ENST00000427995 DNAJC5Q9H3Z4 198 aa7.89□□□□□ -1.15
LINC00854-201ENST00000427995 CFAP43Q8NDM7 1665 aa7.89□□□□□ -1.15
LINC00854-201ENST00000427995 MAPKBP1O60336 1514 aa7.88□□□□□ -1.15
LINC00854-201ENST00000427995 BCANQ96GW7 911 aa7.88□□□□□ -1.15
LINC00854-201ENST00000427995 GAPVD1Q14C86 1478 aa7.87□□□□□ -1.15
LINC00854-201ENST00000427995 PRXQ9BXM0 1461 aa7.87□□□□□ -1.15
LINC00854-201ENST00000427995 RTL5Q5HYW3 569 aaPredicted RBP7.87□□□□□ -1.15
LINC00854-201ENST00000427995 ADAMTS12P58397 1594 aa7.87□□□□□ -1.15
LINC00854-201ENST00000427995 GRIN2BQ13224 1484 aa7.87□□□□□ -1.15
LINC00854-201ENST00000427995 SETD5Q9C0A6 1442 aa7.86□□□□□ -1.15
LINC00854-201ENST00000427995 TIAM1Q13009 1591 aa7.86□□□□□ -1.15
LINC00854-201ENST00000427995 RBM42Q9BTD8 480 aaKnown RBP7.86□□□□□ -1.15
LINC00854-201ENST00000427995 ZNF219Q9P2Y4 722 aaPredicted RBP7.86□□□□□ -1.15
LINC00854-201ENST00000427995 MAGI1Q96QZ7 1491 aaPredicted RBP7.86□□□□□ -1.15
LINC00854-201ENST00000427995 DEKP35659 375 aaKnown RBP7.85□□□□□ -1.15
LINC00854-201ENST00000427995 CHRDL2Q6WN34 429 aa7.85□□□□□ -1.15
LINC00854-201ENST00000427995 PPP4R2Q9NY27 417 aa7.85□□□□□ -1.15
LINC00854-201ENST00000427995 RAB3GAP2Q9H2M9 1393 aa7.84□□□□□ -1.15
LINC00854-201ENST00000427995 CLASP1Q7Z460 1538 aa7.84□□□□□ -1.15
LINC00854-201ENST00000427995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.84□□□□□ -1.16
LINC00854-201ENST00000427995 NOP58Q9Y2X3 529 aaKnown RBP7.83□□□□□ -1.16
LINC00854-201ENST00000427995 SYNJ2O15056 1496 aa7.82□□□□□ -1.16
LINC00854-201ENST00000427995 FHAD1B1AJZ9 1412 aa7.82□□□□□ -1.16
LINC00854-201ENST00000427995 PPP1R15AO75807 674 aaPredicted RBP7.82□□□□□ -1.16
LINC00854-201ENST00000427995 ANP32AP39687 249 aaKnown RBP7.82□□□□□ -1.16
LINC00854-201ENST00000427995 SP7Q8TDD2 431 aaPredicted RBP7.82□□□□□ -1.16
LINC00854-201ENST00000427995 CEP170Q5SW79 1584 aa7.81□□□□□ -1.16
LINC00854-201ENST00000427995 KIF27Q86VH2 1401 aa7.81□□□□□ -1.16
LINC00854-201ENST00000427995 POLR1AO95602 1720 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms