RNA–Protein interactions for RNA: ENST00000427995.5

LINC00854-201, Long intergenic non-protein coding RNA 854, humanhuman

TSL 3

Gene LINC00854, Length 912 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854-201ENST00000427995 AEBP2Q6ZN18 517 aaPredicted RBP13.58□□□□□ -0.24
LINC00854-201ENST00000427995 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
LINC00854-201ENST00000427995 SENP3Q9H4L4 574 aaPredicted RBP11.75□□□□□ -0.53
LINC00854-201ENST00000427995 PHF23Q9BUL5 403 aaPredicted RBP11.52□□□□□ -0.57
LINC00854-201ENST00000427995 NISCHQ9Y2I1 1504 aa11.14□□□□□ -0.63
LINC00854-201ENST00000427995 POTEDQ86YR6 584 aa11.04□□□□□ -0.64
LINC00854-201ENST00000427995 FOXD1Q16676 465 aa10.96□□□□□ -0.65
LINC00854-201ENST00000427995 MSH5O43196 834 aa10.5□□□□□ -0.73
LINC00854-201ENST00000427995 PIAS4Q8N2W9 510 aaPredicted RBP10.2□□□□□ -0.78
LINC00854-201ENST00000427995 PLPPR3Q6T4P5 718 aa10.01□□□□□ -0.81
LINC00854-201ENST00000427995 CCDC180Q9P1Z9 1646 aa9.94□□□□□ -0.82
LINC00854-201ENST00000427995 PPP6R1Q9UPN7 881 aa9.86□□□□□ -0.83
LINC00854-201ENST00000427995 ADRA2BP18089 450 aa9.84□□□□□ -0.83
LINC00854-201ENST00000427995 ABCC9O60706 1549 aa9.64□□□□□ -0.87
LINC00854-201ENST00000427995 PELP1Q8IZL8 1130 aaKnown RBP9.61□□□□□ -0.87
LINC00854-201ENST00000427995 HRCP23327 699 aa9.48□□□□□ -0.89
LINC00854-201ENST00000427995 MYT1Q01538 1121 aa9.4□□□□□ -0.9
LINC00854-201ENST00000427995 CACNB1Q02641 598 aaPredicted RBP9.36□□□□□ -0.91
LINC00854-201ENST00000427995 ZCCHC6Q5VYS8 1495 aaKnown RBP9.33□□□□□ -0.92
LINC00854-201ENST00000427995 NACADO15069 1562 aa9.29□□□□□ -0.92
LINC00854-201ENST00000427995 DCAF1Q9Y4B6 1507 aa9.28□□□□□ -0.92
LINC00854-201ENST00000427995 RB1CC1Q8TDY2 1594 aa9.28□□□□□ -0.92
LINC00854-201ENST00000427995 MYO15BQ96JP2 1530 aa9.26□□□□□ -0.93
LINC00854-201ENST00000427995 UNC13AQ9UPW8 1703 aa9.22□□□□□ -0.93
LINC00854-201ENST00000427995 DMRT2Q9Y5R5 561 aa9.2□□□□□ -0.94
LINC00854-201ENST00000427995 ZEB1P37275 1124 aaPredicted RBP9.18□□□□□ -0.94
LINC00854-201ENST00000427995 MAPK8IP2Q13387 824 aaPredicted RBP9.18□□□□□ -0.94
LINC00854-201ENST00000427995 BICRAQ9NZM4 1560 aa9.12□□□□□ -0.95
LINC00854-201ENST00000427995 DCAF8L2P0C7V8 631 aa9.09□□□□□ -0.95
LINC00854-201ENST00000427995 SCAF1Q9H7N4 1312 aaKnown RBP9.08□□□□□ -0.96
LINC00854-201ENST00000427995 KCNA4P22459 653 aa9.08□□□□□ -0.96
LINC00854-201ENST00000427995 PCGF6Q9BYE7 350 aa9.08□□□□□ -0.96
LINC00854-201ENST00000427995 EHMT2Q96KQ7 1210 aa9.07□□□□□ -0.96
LINC00854-201ENST00000427995 SUPT5HO00267 1087 aaKnown RBP9.06□□□□□ -0.96
LINC00854-201ENST00000427995 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
LINC00854-201ENST00000427995 SHROOM4Q9ULL8 1493 aa9.04□□□□□ -0.96
LINC00854-201ENST00000427995 TRIM26Q12899 539 aaPredicted RBP9.02□□□□□ -0.97
LINC00854-201ENST00000427995 DCAF8L1A6NGE4 600 aa9□□□□□ -0.97
LINC00854-201ENST00000427995 PABPN1Q86U42 306 aaKnown RBP eCLIP8.96□□□□□ -0.98
LINC00854-201ENST00000427995 PPP4R3CPQ6ZMV5 832 aa8.95□□□□□ -0.98
LINC00854-201ENST00000427995 PPARGC1BQ86YN6 1023 aaKnown RBP8.92□□□□□ -0.98
LINC00854-201ENST00000427995 TTBK1Q5TCY1 1321 aaPredicted RBP8.88□□□□□ -0.99
LINC00854-201ENST00000427995 DNAJC5BQ9UF47 199 aa8.87□□□□□ -0.99
LINC00854-201ENST00000427995 RNF39Q9H2S5 420 aa8.86□□□□□ -0.99
LINC00854-201ENST00000427995 CENPBP07199 599 aaPredicted RBP8.85□□□□□ -0.99
LINC00854-201ENST00000427995 EIF4G1Q04637 1599 aaKnown RBP8.81□□□□□ -1
LINC00854-201ENST00000427995 ACIN1Q9UKV3 1341 aaKnown RBP8.77□□□□□ -1.01
LINC00854-201ENST00000427995 CC2D2AQ9P2K1 1620 aa8.76□□□□□ -1.01
LINC00854-201ENST00000427995 C1QBPQ07021 282 aaKnown RBP8.75□□□□□ -1.01
LINC00854-201ENST00000427995 CECR2Q9BXF3 1484 aa8.7□□□□□ -1.02
LINC00854-201ENST00000427995 CSRNP3Q8WYN3 585 aa8.7□□□□□ -1.02
LINC00854-201ENST00000427995 CLSPNQ9HAW4 1339 aa8.7□□□□□ -1.02
LINC00854-201ENST00000427995 NPM3O75607 178 aaKnown RBP8.69□□□□□ -1.02
LINC00854-201ENST00000427995 SMARCA4P51532 1647 aa8.67□□□□□ -1.02
LINC00854-201ENST00000427995 SLC4A1APQ9BWU0 796 aaKnown RBP8.66□□□□□ -1.02
LINC00854-201ENST00000427995 HOXD11P31277 338 aaPredicted RBP8.65□□□□□ -1.02
LINC00854-201ENST00000427995 LOC105371045A0A1W2PR82 267 aa8.62□□□□□ -1.03
LINC00854-201ENST00000427995 MROH2BQ7Z745 1585 aa8.61□□□□□ -1.03
LINC00854-201ENST00000427995 BAZ1AQ9NRL2 1556 aaPredicted RBP8.61□□□□□ -1.03
LINC00854-201ENST00000427995 PEG3Q9GZU2 1588 aa8.61□□□□□ -1.03
LINC00854-201ENST00000427995 ATAD2BQ9ULI0 1458 aa8.59□□□□□ -1.03
LINC00854-201ENST00000427995 NCBP3Q53F19 620 aaKnown RBP8.59□□□□□ -1.03
LINC00854-201ENST00000427995 GTF3C3Q9Y5Q9 886 aa8.59□□□□□ -1.03
LINC00854-201ENST00000427995 POTEHQ6S545 545 aa8.58□□□□□ -1.04
LINC00854-201ENST00000427995 NEUROD1Q13562 356 aa8.57□□□□□ -1.04
LINC00854-201ENST00000427995 DIEXFQ68CQ4 756 aaKnown RBP8.57□□□□□ -1.04
LINC00854-201ENST00000427995 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
LINC00854-201ENST00000427995 HMGXB3Q12766 1538 aa8.56□□□□□ -1.04
LINC00854-201ENST00000427995 CNKSR2Q8WXI2 1034 aa8.56□□□□□ -1.04
LINC00854-201ENST00000427995 TRIM41Q8WV44 630 aa8.55□□□□□ -1.04
LINC00854-201ENST00000427995 SMARCA2P51531 1590 aa8.55□□□□□ -1.04
LINC00854-201ENST00000427995 WIZO95785 1651 aa8.54□□□□□ -1.04
LINC00854-201ENST00000427995 CCER1Q8TC90 406 aaPredicted RBP8.54□□□□□ -1.04
LINC00854-201ENST00000427995 WRNQ14191 1432 aaPredicted RBP eCLIP8.52□□□□□ -1.05
LINC00854-201ENST00000427995 RSF1Q96T23 1441 aaPredicted RBP8.49□□□□□ -1.05
LINC00854-201ENST00000427995 RNF216Q9NWF9 866 aaPredicted RBP8.49□□□□□ -1.05
LINC00854-201ENST00000427995 BAZ1BQ9UIG0 1483 aaKnown RBP8.48□□□□□ -1.05
LINC00854-201ENST00000427995 ZNF316A6NFI3 1004 aaPredicted RBP8.45□□□□□ -1.06
LINC00854-201ENST00000427995 ZBTB22O15209 634 aa8.44□□□□□ -1.06
LINC00854-201ENST00000427995 EEA1Q15075 1411 aa8.43□□□□□ -1.06
LINC00854-201ENST00000427995 TOP2AP11388 1531 aaKnown RBP8.42□□□□□ -1.06
LINC00854-201ENST00000427995 NESP48681 1621 aa8.4□□□□□ -1.07
LINC00854-201ENST00000427995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.37□□□□□ -1.07
LINC00854-201ENST00000427995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC00854-201ENST00000427995 LAMC3Q9Y6N6 1575 aa8.35□□□□□ -1.07
LINC00854-201ENST00000427995 ANP32EQ9BTT0 268 aa8.34□□□□□ -1.07
LINC00854-201ENST00000427995 KIF21AQ7Z4S6 1674 aa8.34□□□□□ -1.08
LINC00854-201ENST00000427995 TNIKQ9UKE5 1360 aa8.33□□□□□ -1.08
LINC00854-201ENST00000427995 CEP162Q5TB80 1403 aa8.32□□□□□ -1.08
LINC00854-201ENST00000427995 THOC2Q8NI27 1593 aaKnown RBP8.31□□□□□ -1.08
LINC00854-201ENST00000427995 FAM9AQ8IZU1 332 aaPredicted RBP8.3□□□□□ -1.08
LINC00854-201ENST00000427995 CCDC88BA6NC98 1476 aa8.3□□□□□ -1.08
LINC00854-201ENST00000427995 PRDM2Q13029 1718 aa8.29□□□□□ -1.08
LINC00854-201ENST00000427995 MYT1LQ9UL68 1186 aa8.29□□□□□ -1.08
LINC00854-201ENST00000427995 CFTRP13569 1480 aa8.28□□□□□ -1.08
LINC00854-201ENST00000427995 GOLGA3Q08378 1498 aa8.28□□□□□ -1.08
LINC00854-201ENST00000427995 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
LINC00854-201ENST00000427995 BCL11AQ9H165 835 aa8.27□□□□□ -1.09
LINC00854-201ENST00000427995 YTHDC1Q96MU7 727 aaKnown RBP8.26□□□□□ -1.09
LINC00854-201ENST00000427995 KIF21BO75037 1637 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms