RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 FKBP8Q14318 412 aa19.03■□□□□ 0.64
TRPM4-202ENST00000427978 PHLDB1Q86UU1 1377 aa19.02■□□□□ 0.64
TRPM4-202ENST00000427978 CFTRP13569 1480 aa19.02■□□□□ 0.63
TRPM4-202ENST00000427978 BIVM-ERCC5R4GMW8 1640 aa19.02■□□□□ 0.63
TRPM4-202ENST00000427978 FHOD3Q2V2M9 1422 aa19.01■□□□□ 0.63
TRPM4-202ENST00000427978 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
TRPM4-202ENST00000427978 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
TRPM4-202ENST00000427978 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
TRPM4-202ENST00000427978 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
TRPM4-202ENST00000427978 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
TRPM4-202ENST00000427978 NEFLP07196 543 aa18.96■□□□□ 0.63
TRPM4-202ENST00000427978 ANP32CO43423 234 aa18.95■□□□□ 0.62
TRPM4-202ENST00000427978 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
TRPM4-202ENST00000427978 HMGXB3Q12766 1538 aa18.91■□□□□ 0.62
TRPM4-202ENST00000427978 TONSLQ96HA7 1378 aa18.91■□□□□ 0.62
TRPM4-202ENST00000427978 RRP7BPQ9NSQ0 103 aa18.91■□□□□ 0.62
TRPM4-202ENST00000427978 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
TRPM4-202ENST00000427978 LRRC9Q6ZRR7 1453 aa18.89■□□□□ 0.61
TRPM4-202ENST00000427978 FHAD1B1AJZ9 1412 aa18.86■□□□□ 0.61
TRPM4-202ENST00000427978 TDRD9Q8NDG6 1382 aaKnown RBP18.86■□□□□ 0.61
TRPM4-202ENST00000427978 IRX6P78412 446 aaPredicted RBP18.85■□□□□ 0.61
TRPM4-202ENST00000427978 TSHZ2Q9NRE2 1034 aa18.84■□□□□ 0.61
TRPM4-202ENST00000427978 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.61
TRPM4-202ENST00000427978 TIAM1Q13009 1591 aa18.83■□□□□ 0.61
TRPM4-202ENST00000427978 WDR97A6NE52 1622 aa18.83■□□□□ 0.61
TRPM4-202ENST00000427978 FANCD2Q9BXW9 1451 aa18.81■□□□□ 0.6
TRPM4-202ENST00000427978 POLR3GLQ9BT43 218 aa18.81■□□□□ 0.6
TRPM4-202ENST00000427978 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
TRPM4-202ENST00000427978 NESP48681 1621 aa18.8■□□□□ 0.6
TRPM4-202ENST00000427978 HNRNPUQ00839 825 aaKnown RBP eCLIP18.78■□□□□ 0.6
TRPM4-202ENST00000427978 FOXD1Q16676 465 aa18.77■□□□□ 0.6
TRPM4-202ENST00000427978 PCF11O94913 1555 aaKnown RBP18.73■□□□□ 0.59
TRPM4-202ENST00000427978 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
TRPM4-202ENST00000427978 SENP3-EIF4A1A0A087X0R7 540 aa18.72■□□□□ 0.59
TRPM4-202ENST00000427978 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
TRPM4-202ENST00000427978 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
TRPM4-202ENST00000427978 POLA1P09884 1462 aaPredicted RBP18.66■□□□□ 0.58
TRPM4-202ENST00000427978 FGD6Q6ZV73 1430 aa18.65■□□□□ 0.58
TRPM4-202ENST00000427978 CCDC18Q5T9S5 1454 aa18.64■□□□□ 0.57
TRPM4-202ENST00000427978 CC2D2AQ9P2K1 1620 aa18.64■□□□□ 0.57
TRPM4-202ENST00000427978 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
TRPM4-202ENST00000427978 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
TRPM4-202ENST00000427978 FMN1Q68DA7 1419 aa18.62■□□□□ 0.57
TRPM4-202ENST00000427978 ZNF777Q9ULD5 760 aaPredicted RBP18.61■□□□□ 0.57
TRPM4-202ENST00000427978 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
TRPM4-202ENST00000427978 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
TRPM4-202ENST00000427978 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
TRPM4-202ENST00000427978 CCER2I3L3R5 266 aa18.58■□□□□ 0.57
TRPM4-202ENST00000427978 FBLN2P98095 1184 aa18.58■□□□□ 0.56
TRPM4-202ENST00000427978 FYCO1Q9BQS8 1478 aa18.57■□□□□ 0.56
TRPM4-202ENST00000427978 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.568e-7■■■□□ 16.1
TRPM4-202ENST00000427978 MAP3K1Q13233 1512 aa18.55■□□□□ 0.56
TRPM4-202ENST00000427978 RBM19Q9Y4C8 960 aaKnown RBP18.54■□□□□ 0.56
TRPM4-202ENST00000427978 NCOA2Q15596 1464 aa18.53■□□□□ 0.56
TRPM4-202ENST00000427978 L3MBTL2Q969R5 705 aa18.53■□□□□ 0.56
TRPM4-202ENST00000427978 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
TRPM4-202ENST00000427978 MPHOSPH9Q99550 1183 aa18.52■□□□□ 0.55
TRPM4-202ENST00000427978 ANP32EQ9BTT0 268 aa18.52■□□□□ 0.55
TRPM4-202ENST00000427978 ABCA10Q8WWZ4 1543 aa18.51■□□□□ 0.55
TRPM4-202ENST00000427978 CCDC184Q52MB2 194 aa18.51■□□□□ 0.55
TRPM4-202ENST00000427978 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
TRPM4-202ENST00000427978 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.557e-7■■■■□ 25.1
TRPM4-202ENST00000427978 UACAQ9BZF9 1416 aa18.5■□□□□ 0.55
TRPM4-202ENST00000427978 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
TRPM4-202ENST00000427978 DNMBPQ6XZF7 1577 aa18.49■□□□□ 0.55
TRPM4-202ENST00000427978 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
TRPM4-202ENST00000427978 MYOM3Q5VTT5 1437 aa18.49■□□□□ 0.55
TRPM4-202ENST00000427978 ERICH6Q7L0X2 663 aa18.49■□□□□ 0.55
TRPM4-202ENST00000427978 ZNF644Q9H582 1327 aaPredicted RBP18.48■□□□□ 0.55
TRPM4-202ENST00000427978 NAIPQ13075 1403 aa18.48■□□□□ 0.55
TRPM4-202ENST00000427978 PRKCSHP14314 528 aaPredicted RBP18.47■□□□□ 0.55
TRPM4-202ENST00000427978 HFM1A2PYH4 1435 aa18.46■□□□□ 0.55
TRPM4-202ENST00000427978 CDK11AQ9UQ88 783 aaPredicted RBP18.46■□□□□ 0.55
TRPM4-202ENST00000427978 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
TRPM4-202ENST00000427978 EFCAB5A4FU69 1503 aa18.44■□□□□ 0.54
TRPM4-202ENST00000427978 URB2Q14146 1524 aaKnown RBP18.43■□□□□ 0.54
TRPM4-202ENST00000427978 C11orf95C9JLR9 678 aaPredicted RBP18.42■□□□□ 0.54
TRPM4-202ENST00000427978 B4GALNT3Q6L9W6 998 aa18.4■□□□□ 0.54
TRPM4-202ENST00000427978 PRDM2Q13029 1718 aa18.39■□□□□ 0.53
TRPM4-202ENST00000427978 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
TRPM4-202ENST00000427978 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
TRPM4-202ENST00000427978 PDS5BQ9NTI5 1447 aa18.37■□□□□ 0.53
TRPM4-202ENST00000427978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.37■□□□□ 0.531e-7■■□□□ 12.3
TRPM4-202ENST00000427978 PTPN23Q9H3S7 1636 aa18.37■□□□□ 0.53
TRPM4-202ENST00000427978 NBPF8Q3BBV2 869 aa18.37■□□□□ 0.53
TRPM4-202ENST00000427978 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
TRPM4-202ENST00000427978 CDK13Q14004 1512 aaKnown RBP18.36■□□□□ 0.53
TRPM4-202ENST00000427978 CFDP1Q9UEE9 299 aaPredicted RBP18.35■□□□□ 0.53
TRPM4-202ENST00000427978 PRKRIP1Q9H875 184 aaPredicted RBP18.33■□□□□ 0.52
TRPM4-202ENST00000427978 CUL7Q14999 1698 aa18.32■□□□□ 0.52
TRPM4-202ENST00000427978 CTTNBP2Q8WZ74 1663 aa18.3■□□□□ 0.52
TRPM4-202ENST00000427978 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
TRPM4-202ENST00000427978 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
TRPM4-202ENST00000427978 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
TRPM4-202ENST00000427978 MAGI3Q5TCQ9 1506 aa18.27■□□□□ 0.52
TRPM4-202ENST00000427978 PKD2Q13563 968 aa18.26■□□□□ 0.51
TRPM4-202ENST00000427978 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
TRPM4-202ENST00000427978 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
TRPM4-202ENST00000427978 CCDC7Q96M83 1385 aa18.25■□□□□ 0.51
TRPM4-202ENST00000427978 BCL11AQ9H165 835 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms