RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 EFCAB5A4FU69 1503 aa14.28□□□□□ -0.12
TPTE-201ENST00000427445 SETD5Q9C0A6 1442 aa14.28□□□□□ -0.12
TPTE-201ENST00000427445 MAPKBP1O60336 1514 aa14.27□□□□□ -0.12
TPTE-201ENST00000427445 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.13
TPTE-201ENST00000427445 AQRO60306 1485 aaKnown RBP eCLIP14.27□□□□□ -0.132e-9■■■■□ 23.9
TPTE-201ENST00000427445 FGD5Q6ZNL6 1462 aa14.26□□□□□ -0.13
TPTE-201ENST00000427445 CC2D2AQ9P2K1 1620 aa14.24□□□□□ -0.13
TPTE-201ENST00000427445 FYCO1Q9BQS8 1478 aa14.24□□□□□ -0.13
TPTE-201ENST00000427445 CUL7Q14999 1698 aa14.22□□□□□ -0.13
TPTE-201ENST00000427445 PCF11O94913 1555 aaKnown RBP14.2□□□□□ -0.14
TPTE-201ENST00000427445 DNMBPQ6XZF7 1577 aa14.2□□□□□ -0.14
TPTE-201ENST00000427445 ABCA10Q8WWZ4 1543 aa14.19□□□□□ -0.14
TPTE-201ENST00000427445 CASKIN1Q8WXD9 1431 aa14.19□□□□□ -0.14
TPTE-201ENST00000427445 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
TPTE-201ENST00000427445 CTTNBP2Q8WZ74 1663 aa14.16□□□□□ -0.14
TPTE-201ENST00000427445 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
TPTE-201ENST00000427445 FANCD2Q9BXW9 1451 aa14.15□□□□□ -0.15
TPTE-201ENST00000427445 FMN1Q68DA7 1419 aa14.13□□□□□ -0.15
TPTE-201ENST00000427445 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
TPTE-201ENST00000427445 WDR97A6NE52 1622 aa14.1□□□□□ -0.15
TPTE-201ENST00000427445 TOPBP1Q92547 1522 aa14.09□□□□□ -0.15
TPTE-201ENST00000427445 ITGAEP38570 1179 aa14.08□□□□□ -0.15
TPTE-201ENST00000427445 CCER2I3L3R5 266 aa14.08□□□□□ -0.16
TPTE-201ENST00000427445 KIF21AQ7Z4S6 1674 aa14.08□□□□□ -0.16
TPTE-201ENST00000427445 POLA1P09884 1462 aaPredicted RBP14.07□□□□□ -0.16
TPTE-201ENST00000427445 FGD6Q6ZV73 1430 aa14.07□□□□□ -0.16
TPTE-201ENST00000427445 FAM50AQ14320 339 aaKnown RBP14.05□□□□□ -0.16
TPTE-201ENST00000427445 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
TPTE-201ENST00000427445 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
TPTE-201ENST00000427445 FHOD3Q2V2M9 1422 aa14.05□□□□□ -0.16
TPTE-201ENST00000427445 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
TPTE-201ENST00000427445 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
TPTE-201ENST00000427445 UACAQ9BZF9 1416 aa14.03□□□□□ -0.16
TPTE-201ENST00000427445 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.16
TPTE-201ENST00000427445 EHBP1L1Q8N3D4 1523 aa14.01□□□□□ -0.17
TPTE-201ENST00000427445 CCDC18Q5T9S5 1454 aa14.01□□□□□ -0.17
TPTE-201ENST00000427445 ABCA5Q8WWZ7 1642 aa14□□□□□ -0.17
TPTE-201ENST00000427445 PTPN23Q9H3S7 1636 aa14□□□□□ -0.17
TPTE-201ENST00000427445 SUPT6HQ7KZ85 1726 aaKnown RBP14□□□□□ -0.17
TPTE-201ENST00000427445 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
TPTE-201ENST00000427445 MTUS2Q5JR59 1369 aa13.98□□□□□ -0.17
TPTE-201ENST00000427445 TONSLQ96HA7 1378 aa13.98□□□□□ -0.17
TPTE-201ENST00000427445 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
TPTE-201ENST00000427445 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
TPTE-201ENST00000427445 ANP32CO43423 234 aa13.97□□□□□ -0.17
TPTE-201ENST00000427445 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
TPTE-201ENST00000427445 AKNAQ7Z591 1439 aa13.97□□□□□ -0.17
TPTE-201ENST00000427445 DDX10Q13206 875 aaKnown RBP13.96□□□□□ -0.17
TPTE-201ENST00000427445 ARHGEF11O15085 1522 aa13.96□□□□□ -0.18
TPTE-201ENST00000427445 TSHZ2Q9NRE2 1034 aa13.95□□□□□ -0.18
TPTE-201ENST00000427445 NCOA2Q15596 1464 aa13.94□□□□□ -0.18
TPTE-201ENST00000427445 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
TPTE-201ENST00000427445 NAIPQ13075 1403 aa13.93□□□□□ -0.18
TPTE-201ENST00000427445 UGGT2Q9NYU1 1516 aa13.93□□□□□ -0.18
TPTE-201ENST00000427445 GCC2Q8IWJ2 1684 aa13.93□□□□□ -0.18
TPTE-201ENST00000427445 NEFLP07196 543 aa13.93□□□□□ -0.18
TPTE-201ENST00000427445 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
TPTE-201ENST00000427445 P3H3Q8IVL6 736 aa13.91□□□□□ -0.18
TPTE-201ENST00000427445 GAPVD1Q14C86 1478 aa13.91□□□□□ -0.18
TPTE-201ENST00000427445 LRRIQ1Q96JM4 1722 aa13.91□□□□□ -0.18
TPTE-201ENST00000427445 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.18
TPTE-201ENST00000427445 ATP1B4Q9UN42 357 aaPredicted RBP13.9□□□□□ -0.18
TPTE-201ENST00000427445 PTPRKQ15262 1439 aa13.88□□□□□ -0.19
TPTE-201ENST00000427445 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
TPTE-201ENST00000427445 KCNH8Q96L42 1107 aa13.88□□□□□ -0.19
TPTE-201ENST00000427445 MIA2Q96PC5 1412 aa13.88□□□□□ -0.19
TPTE-201ENST00000427445 KDM5BQ9UGL1 1544 aa13.87□□□□□ -0.19
TPTE-201ENST00000427445 FKBP8Q14318 412 aa13.85□□□□□ -0.19
TPTE-201ENST00000427445 NESP48681 1621 aa13.84□□□□□ -0.19
TPTE-201ENST00000427445 ANP32EQ9BTT0 268 aa13.83□□□□□ -0.2
TPTE-201ENST00000427445 ERICH6BQ5W0A0 696 aa13.82□□□□□ -0.2
TPTE-201ENST00000427445 TARBP1Q13395 1621 aaKnown RBP13.81□□□□□ -0.2
TPTE-201ENST00000427445 IQGAP2Q13576 1575 aa13.8□□□□□ -0.2
TPTE-201ENST00000427445 ROCK1Q13464 1354 aa13.78□□□□□ -0.2
TPTE-201ENST00000427445 PBRM1Q86U86 1689 aa13.78□□□□□ -0.2
TPTE-201ENST00000427445 MAGI3Q5TCQ9 1506 aa13.78□□□□□ -0.2
TPTE-201ENST00000427445 TDRD9Q8NDG6 1382 aaKnown RBP13.78□□□□□ -0.2
TPTE-201ENST00000427445 EPRSP07814 1512 aaKnown RBP13.78□□□□□ -0.2
TPTE-201ENST00000427445 ADAMTS12P58397 1594 aa13.76□□□□□ -0.21
TPTE-201ENST00000427445 WDR62O43379 1518 aa13.76□□□□□ -0.21
TPTE-201ENST00000427445 CNTLNQ9NXG0 1405 aa13.75□□□□□ -0.21
TPTE-201ENST00000427445 EIF4G2P78344 907 aaKnown RBP eCLIP13.74□□□□□ -0.21
TPTE-201ENST00000427445 POLR1AO95602 1720 aaPredicted RBP13.74□□□□□ -0.21
TPTE-201ENST00000427445 DENND4BO75064 1496 aaPredicted RBP13.73□□□□□ -0.21
TPTE-201ENST00000427445 TRIM52Q96A61 297 aa13.72□□□□□ -0.21
TPTE-201ENST00000427445 DNMT1P26358 1616 aaKnown RBP13.71□□□□□ -0.21
TPTE-201ENST00000427445 NCOA1Q15788 1441 aa13.71□□□□□ -0.21
TPTE-201ENST00000427445 BCANQ96GW7 911 aa13.71□□□□□ -0.22
TPTE-201ENST00000427445 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.22
TPTE-201ENST00000427445 RPRD2Q5VT52 1461 aaKnown RBP13.7□□□□□ -0.22
TPTE-201ENST00000427445 HSPA5P11021 654 aaKnown RBP13.7□□□□□ -0.22
TPTE-201ENST00000427445 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
TPTE-201ENST00000427445 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
TPTE-201ENST00000427445 RBM19Q9Y4C8 960 aaKnown RBP13.68□□□□□ -0.22
TPTE-201ENST00000427445 DAPK1P53355 1430 aa13.67□□□□□ -0.22
TPTE-201ENST00000427445 KDM6BO15054 1643 aa13.66□□□□□ -0.22
TPTE-201ENST00000427445 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
TPTE-201ENST00000427445 CCDC7Q96M83 1385 aa13.66□□□□□ -0.22
TPTE-201ENST00000427445 ANKRD30BQ9BXX2 1392 aa13.66□□□□□ -0.22
TPTE-201ENST00000427445 TEX14Q8IWB6 1497 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms