RNA–Protein interactions for RNA: ENST00000427445.6

TPTE-201, Transcript of transmembrane phosphatase with tensin homology, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TPTE, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPTE-201ENST00000427445 NISCHQ9Y2I1 1504 aa20.2■□□□□ 0.82
TPTE-201ENST00000427445 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
TPTE-201ENST00000427445 ZCCHC6Q5VYS8 1495 aaKnown RBP17.16■□□□□ 0.34
TPTE-201ENST00000427445 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
TPTE-201ENST00000427445 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
TPTE-201ENST00000427445 SUPT5HO00267 1087 aaKnown RBP16.73■□□□□ 0.27
TPTE-201ENST00000427445 CHIC1Q5VXU3 224 aa16.51■□□□□ 0.23
TPTE-201ENST00000427445 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
TPTE-201ENST00000427445 HRCP23327 699 aa16.33■□□□□ 0.2
TPTE-201ENST00000427445 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
TPTE-201ENST00000427445 ABCC9O60706 1549 aa16.23■□□□□ 0.19
TPTE-201ENST00000427445 PCGF6Q9BYE7 350 aa16.03■□□□□ 0.16
TPTE-201ENST00000427445 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
TPTE-201ENST00000427445 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
TPTE-201ENST00000427445 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
TPTE-201ENST00000427445 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
TPTE-201ENST00000427445 NACADO15069 1562 aa15.89■□□□□ 0.13
TPTE-201ENST00000427445 LOC105371045A0A1W2PR82 267 aa15.84■□□□□ 0.13
TPTE-201ENST00000427445 ZEB1P37275 1124 aaPredicted RBP15.79■□□□□ 0.12
TPTE-201ENST00000427445 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
TPTE-201ENST00000427445 PPARGC1BQ86YN6 1023 aaKnown RBP15.66■□□□□ 0.1
TPTE-201ENST00000427445 BAZ1AQ9NRL2 1556 aaPredicted RBP15.61■□□□□ 0.09
TPTE-201ENST00000427445 MROH2BQ7Z745 1585 aa15.6■□□□□ 0.09
TPTE-201ENST00000427445 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
TPTE-201ENST00000427445 EIF4G1Q04637 1599 aaKnown RBP15.53■□□□□ 0.08
TPTE-201ENST00000427445 WIZO95785 1651 aa15.51■□□□□ 0.07
TPTE-201ENST00000427445 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
TPTE-201ENST00000427445 FAM9AQ8IZU1 332 aaPredicted RBP15.38■□□□□ 0.05
TPTE-201ENST00000427445 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
TPTE-201ENST00000427445 WRNQ14191 1432 aaPredicted RBP eCLIP15.35■□□□□ 0.05
TPTE-201ENST00000427445 EEA1Q15075 1411 aa15.33■□□□□ 0.05
TPTE-201ENST00000427445 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
TPTE-201ENST00000427445 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
TPTE-201ENST00000427445 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
TPTE-201ENST00000427445 TNIKQ9UKE5 1360 aa15.22■□□□□ 0.03
TPTE-201ENST00000427445 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
TPTE-201ENST00000427445 PEG3Q9GZU2 1588 aa15.17■□□□□ 0.02
TPTE-201ENST00000427445 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
TPTE-201ENST00000427445 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
TPTE-201ENST00000427445 GOLGA3Q08378 1498 aa15.11■□□□□ 0.01
TPTE-201ENST00000427445 CCER1Q8TC90 406 aaPredicted RBP15.1■□□□□ 0.01
TPTE-201ENST00000427445 CSRNP3Q8WYN3 585 aa15.07■□□□□ 0
TPTE-201ENST00000427445 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
TPTE-201ENST00000427445 SOGA1O94964 1423 aa15.05■□□□□ 0
TPTE-201ENST00000427445 KIF21BO75037 1637 aa15.05■□□□□ -0
TPTE-201ENST00000427445 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
TPTE-201ENST00000427445 BICRAQ9NZM4 1560 aa15.02□□□□□ -0.01
TPTE-201ENST00000427445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
TPTE-201ENST00000427445 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
TPTE-201ENST00000427445 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
TPTE-201ENST00000427445 CENPBP07199 599 aaPredicted RBP14.94□□□□□ -0.02
TPTE-201ENST00000427445 ACIN1Q9UKV3 1341 aaKnown RBP14.94□□□□□ -0.02
TPTE-201ENST00000427445 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
TPTE-201ENST00000427445 DIEXFQ68CQ4 756 aaKnown RBP14.92□□□□□ -0.02
TPTE-201ENST00000427445 RUSC2Q8N2Y8 1516 aa14.92□□□□□ -0.02
TPTE-201ENST00000427445 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
TPTE-201ENST00000427445 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
TPTE-201ENST00000427445 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
TPTE-201ENST00000427445 CLIP1P30622 1438 aa14.86□□□□□ -0.03
TPTE-201ENST00000427445 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.03
TPTE-201ENST00000427445 TOP2BQ02880 1626 aa14.83□□□□□ -0.04
TPTE-201ENST00000427445 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
TPTE-201ENST00000427445 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
TPTE-201ENST00000427445 NEUROD1Q13562 356 aa14.78□□□□□ -0.04
TPTE-201ENST00000427445 CLSPNQ9HAW4 1339 aa14.77□□□□□ -0.04
TPTE-201ENST00000427445 APLP2Q06481 763 aa14.74□□□□□ -0.05
TPTE-201ENST00000427445 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
TPTE-201ENST00000427445 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
TPTE-201ENST00000427445 HMGXB3Q12766 1538 aa14.72□□□□□ -0.05
TPTE-201ENST00000427445 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
TPTE-201ENST00000427445 TTBK1Q5TCY1 1321 aaPredicted RBP14.68□□□□□ -0.06
TPTE-201ENST00000427445 GTF3C3Q9Y5Q9 886 aa14.67□□□□□ -0.06
TPTE-201ENST00000427445 MYT1Q01538 1121 aa14.66□□□□□ -0.06
TPTE-201ENST00000427445 NCAPD3P42695 1498 aa14.64□□□□□ -0.07
TPTE-201ENST00000427445 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
TPTE-201ENST00000427445 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
TPTE-201ENST00000427445 KIF27Q86VH2 1401 aa14.59□□□□□ -0.07
TPTE-201ENST00000427445 AEBP2Q6ZN18 517 aaPredicted RBP14.59□□□□□ -0.07
TPTE-201ENST00000427445 CUX2O14529 1486 aa14.59□□□□□ -0.07
TPTE-201ENST00000427445 RRBP1Q9P2E9 1410 aaKnown RBP14.58□□□□□ -0.08
TPTE-201ENST00000427445 PRDM2Q13029 1718 aa14.56□□□□□ -0.08
TPTE-201ENST00000427445 CUX1P39880 1505 aa14.55□□□□□ -0.08
TPTE-201ENST00000427445 CFTRP13569 1480 aa14.54□□□□□ -0.08
TPTE-201ENST00000427445 MAP3K1Q13233 1512 aa14.53□□□□□ -0.08
TPTE-201ENST00000427445 DHX57Q6P158 1386 aaKnown RBP14.53□□□□□ -0.08
TPTE-201ENST00000427445 MIER1Q8N108 512 aa14.5□□□□□ -0.09
TPTE-201ENST00000427445 ARHGAP35Q9NRY4 1499 aa14.44□□□□□ -0.1
TPTE-201ENST00000427445 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
TPTE-201ENST00000427445 TIAM1Q13009 1591 aa14.39□□□□□ -0.11
TPTE-201ENST00000427445 KANK4Q5T7N3 995 aaPredicted RBP14.38□□□□□ -0.11
TPTE-201ENST00000427445 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
TPTE-201ENST00000427445 FHAD1B1AJZ9 1412 aa14.35□□□□□ -0.11
TPTE-201ENST00000427445 IGF1RP08069 1367 aa14.33□□□□□ -0.11
TPTE-201ENST00000427445 CFAP43Q8NDM7 1665 aa14.33□□□□□ -0.12
TPTE-201ENST00000427445 RANGAP1P46060 587 aaPredicted RBP14.32□□□□□ -0.12
TPTE-201ENST00000427445 CADPSQ9ULU8 1353 aa14.31□□□□□ -0.12
TPTE-201ENST00000427445 TIMELESSQ9UNS1 1208 aa14.31□□□□□ -0.12
TPTE-201ENST00000427445 LRRC9Q6ZRR7 1453 aa14.3□□□□□ -0.12
TPTE-201ENST00000427445 CARMIL1Q5VZK9 1371 aa14.29□□□□□ -0.12
TPTE-201ENST00000427445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms