RNA–Protein interactions for RNA: ENST00000426467.1

LINC02554-201, Transcript of long intergenic non-protein coding RNA 2554, humanhuman

TSL 1 (best) BASIC

Gene LINC02554, Length 5,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02554-201ENST00000426467 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
LINC02554-201ENST00000426467 PLEKHD1A6NEE1 506 aa14.7□□□□□ -0.06
LINC02554-201ENST00000426467 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
LINC02554-201ENST00000426467 SLC4A1APQ9BWU0 796 aaKnown RBP14.67□□□□□ -0.06
LINC02554-201ENST00000426467 BICRAQ9NZM4 1560 aa14.67□□□□□ -0.06
LINC02554-201ENST00000426467 CFDP1Q9UEE9 299 aaPredicted RBP14.65□□□□□ -0.06
LINC02554-201ENST00000426467 HIRIP3Q9BW71 556 aaPredicted RBP14.65□□□□□ -0.06
LINC02554-201ENST00000426467 BCANQ96GW7 911 aa14.64□□□□□ -0.07
LINC02554-201ENST00000426467 FMN1Q68DA7 1419 aa14.63□□□□□ -0.07
LINC02554-201ENST00000426467 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
LINC02554-201ENST00000426467 IGF1RP08069 1367 aa14.62□□□□□ -0.07
LINC02554-201ENST00000426467 SYNJ1O43426 1573 aa14.61□□□□□ -0.07
LINC02554-201ENST00000426467 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
LINC02554-201ENST00000426467 CFTRP13569 1480 aa14.6□□□□□ -0.07
LINC02554-201ENST00000426467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
LINC02554-201ENST00000426467 FGD5Q6ZNL6 1462 aa14.6□□□□□ -0.07
LINC02554-201ENST00000426467 ARHGAP35Q9NRY4 1499 aa14.6□□□□□ -0.07
LINC02554-201ENST00000426467 SETD5Q9C0A6 1442 aa14.59□□□□□ -0.07
LINC02554-201ENST00000426467 FHOD3Q2V2M9 1422 aa14.59□□□□□ -0.07
LINC02554-201ENST00000426467 EIF4G2P78344 907 aaKnown RBP eCLIP14.58□□□□□ -0.08
LINC02554-201ENST00000426467 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
LINC02554-201ENST00000426467 KCNH8Q96L42 1107 aa14.56□□□□□ -0.08
LINC02554-201ENST00000426467 SCAF1Q9H7N4 1312 aaKnown RBP14.56□□□□□ -0.08
LINC02554-201ENST00000426467 TIMELESSQ9UNS1 1208 aa14.55□□□□□ -0.08
LINC02554-201ENST00000426467 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
LINC02554-201ENST00000426467 HNRNPUQ00839 825 aaKnown RBP eCLIP14.54□□□□□ -0.08
LINC02554-201ENST00000426467 KDM2AQ9Y2K7 1162 aa14.54□□□□□ -0.08
LINC02554-201ENST00000426467 KIF21BO75037 1637 aa14.53□□□□□ -0.08
LINC02554-201ENST00000426467 RAD54L2Q9Y4B4 1467 aa14.51□□□□□ -0.09
LINC02554-201ENST00000426467 TOP2BQ02880 1626 aa14.49□□□□□ -0.09
LINC02554-201ENST00000426467 FAM9BQ8IZU0 186 aa14.49□□□□□ -0.09
LINC02554-201ENST00000426467 UNC13AQ9UPW8 1703 aa14.48□□□□□ -0.09
LINC02554-201ENST00000426467 PEG3Q9GZU2 1588 aa14.48□□□□□ -0.09
LINC02554-201ENST00000426467 ERICH3Q5RHP9 1530 aa14.47□□□□□ -0.09
LINC02554-201ENST00000426467 CARMIL2Q6F5E8 1435 aa14.47□□□□□ -0.09
LINC02554-201ENST00000426467 PRXQ9BXM0 1461 aa14.47□□□□□ -0.09
LINC02554-201ENST00000426467 CHGAP10645 457 aaKnown RBP14.46□□□□□ -0.09
LINC02554-201ENST00000426467 FKBP8Q14318 412 aa14.46□□□□□ -0.09
LINC02554-201ENST00000426467 GAPVD1Q14C86 1478 aa14.45□□□□□ -0.1
LINC02554-201ENST00000426467 CUX1P39880 1505 aa14.45□□□□□ -0.1
LINC02554-201ENST00000426467 MRS2Q9HD23 443 aa14.45□□□□□ -0.1
LINC02554-201ENST00000426467 DHX57Q6P158 1386 aaKnown RBP14.43□□□□□ -0.1
LINC02554-201ENST00000426467 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
LINC02554-201ENST00000426467 TMC1Q8TDI8 760 aa14.42□□□□□ -0.1
LINC02554-201ENST00000426467 RGL3Q3MIN7 710 aa14.41□□□□□ -0.1
LINC02554-201ENST00000426467 ARAP1Q96P48 1450 aa14.4□□□□□ -0.1
LINC02554-201ENST00000426467 DAXXQ9UER7 740 aaPredicted RBP14.4□□□□□ -0.1
LINC02554-201ENST00000426467 NESP48681 1621 aa14.4□□□□□ -0.1
LINC02554-201ENST00000426467 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
LINC02554-201ENST00000426467 PPP1R15AO75807 674 aaPredicted RBP14.36□□□□□ -0.11
LINC02554-201ENST00000426467 MPHOSPH9Q99550 1183 aa14.35□□□□□ -0.11
LINC02554-201ENST00000426467 CCDC18Q5T9S5 1454 aa14.35□□□□□ -0.11
LINC02554-201ENST00000426467 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
LINC02554-201ENST00000426467 TOPBP1Q92547 1522 aa14.34□□□□□ -0.11
LINC02554-201ENST00000426467 FOXD1Q16676 465 aa14.33□□□□□ -0.12
LINC02554-201ENST00000426467 ESF1Q9H501 851 aaKnown RBP14.33□□□□□ -0.12
LINC02554-201ENST00000426467 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
LINC02554-201ENST00000426467 STAG3Q9UJ98 1225 aa14.32□□□□□ -0.12
LINC02554-201ENST00000426467 LRRC9Q6ZRR7 1453 aa14.31□□□□□ -0.12
LINC02554-201ENST00000426467 AQRO60306 1485 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC02554-201ENST00000426467 PHLDB1Q86UU1 1377 aa14.31□□□□□ -0.12
LINC02554-201ENST00000426467 PKD2Q13563 968 aa14.31□□□□□ -0.12
LINC02554-201ENST00000426467 SALL2Q9Y467 1007 aaPredicted RBP14.31□□□□□ -0.12
LINC02554-201ENST00000426467 CASKIN1Q8WXD9 1431 aa14.28□□□□□ -0.12
LINC02554-201ENST00000426467 ANKRD30AQ9BXX3 1397 aa14.28□□□□□ -0.12
LINC02554-201ENST00000426467 HSPA5P11021 654 aaKnown RBP14.27□□□□□ -0.13
LINC02554-201ENST00000426467 DCAF11Q8TEB1 546 aa14.26□□□□□ -0.13
LINC02554-201ENST00000426467 FGD6Q6ZV73 1430 aa14.26□□□□□ -0.13
LINC02554-201ENST00000426467 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
LINC02554-201ENST00000426467 RRBP1Q9P2E9 1410 aaKnown RBP14.25□□□□□ -0.13
LINC02554-201ENST00000426467 NUP155O75694 1391 aa14.25□□□□□ -0.13
LINC02554-201ENST00000426467 CCER2I3L3R5 266 aa14.24□□□□□ -0.13
LINC02554-201ENST00000426467 NEFMP07197 916 aa14.24□□□□□ -0.13
LINC02554-201ENST00000426467 CANXP27824 592 aaKnown RBP14.24□□□□□ -0.13
LINC02554-201ENST00000426467 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
LINC02554-201ENST00000426467 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
LINC02554-201ENST00000426467 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
LINC02554-201ENST00000426467 MYOM3Q5VTT5 1437 aa14.22□□□□□ -0.13
LINC02554-201ENST00000426467 FYCO1Q9BQS8 1478 aa14.22□□□□□ -0.13
LINC02554-201ENST00000426467 WDR43Q15061 677 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC02554-201ENST00000426467 HNRNPMP52272 730 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC02554-201ENST00000426467 IRX6P78412 446 aaPredicted RBP14.21□□□□□ -0.14
LINC02554-201ENST00000426467 RSPH4AQ5TD94 716 aa14.21□□□□□ -0.14
LINC02554-201ENST00000426467 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.14
LINC02554-201ENST00000426467 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
LINC02554-201ENST00000426467 EFCAB5A4FU69 1503 aa14.2□□□□□ -0.14
LINC02554-201ENST00000426467 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
LINC02554-201ENST00000426467 PTPRGP23470 1445 aa14.2□□□□□ -0.14
LINC02554-201ENST00000426467 MRC2Q9UBG0 1479 aa14.18□□□□□ -0.14
LINC02554-201ENST00000426467 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
LINC02554-201ENST00000426467 CCDC136Q96JN2 1154 aa14.17□□□□□ -0.14
LINC02554-201ENST00000426467 NCOA2Q15596 1464 aa14.17□□□□□ -0.14
LINC02554-201ENST00000426467 LAMC3Q9Y6N6 1575 aa14.17□□□□□ -0.14
LINC02554-201ENST00000426467 SUPT16HQ9Y5B9 1047 aaKnown RBP14.16□□□□□ -0.14
LINC02554-201ENST00000426467 RTL5Q5HYW3 569 aaPredicted RBP14.15□□□□□ -0.14
LINC02554-201ENST00000426467 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
LINC02554-201ENST00000426467 TIAM1Q13009 1591 aa14.15□□□□□ -0.14
LINC02554-201ENST00000426467 KANK1Q14678 1352 aa14.14□□□□□ -0.15
LINC02554-201ENST00000426467 IFT140Q96RY7 1462 aa14.13□□□□□ -0.15
LINC02554-201ENST00000426467 ZNF644Q9H582 1327 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms