RNA–Protein interactions for RNA: ENST00000426467.1

LINC02554-201, Transcript of long intergenic non-protein coding RNA 2554, humanhuman

TSL 1 (best) BASIC

Gene LINC02554, Length 5,052 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02554-201ENST00000426467 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
LINC02554-201ENST00000426467 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
LINC02554-201ENST00000426467 SHROOM4Q9ULL8 1493 aa18.13■□□□□ 0.49
LINC02554-201ENST00000426467 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
LINC02554-201ENST00000426467 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
LINC02554-201ENST00000426467 FAM9AQ8IZU1 332 aaPredicted RBP16.92■□□□□ 0.3
LINC02554-201ENST00000426467 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
LINC02554-201ENST00000426467 CHIC1Q5VXU3 224 aa16.73■□□□□ 0.27
LINC02554-201ENST00000426467 PCGF6Q9BYE7 350 aa16.72■□□□□ 0.27
LINC02554-201ENST00000426467 ABCC9O60706 1549 aa16.72■□□□□ 0.27
LINC02554-201ENST00000426467 ZCCHC6Q5VYS8 1495 aaKnown RBP16.71■□□□□ 0.27
LINC02554-201ENST00000426467 CCDC180Q9P1Z9 1646 aa16.7■□□□□ 0.26
LINC02554-201ENST00000426467 APLP2Q06481 763 aa16.54■□□□□ 0.24
LINC02554-201ENST00000426467 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
LINC02554-201ENST00000426467 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
LINC02554-201ENST00000426467 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
LINC02554-201ENST00000426467 RANGAP1P46060 587 aaPredicted RBP16.33■□□□□ 0.2
LINC02554-201ENST00000426467 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC02554-201ENST00000426467 TRIM26Q12899 539 aaPredicted RBP16.26■□□□□ 0.19
LINC02554-201ENST00000426467 ZEB1P37275 1124 aaPredicted RBP16.25■□□□□ 0.19
LINC02554-201ENST00000426467 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
LINC02554-201ENST00000426467 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
LINC02554-201ENST00000426467 CCER1Q8TC90 406 aaPredicted RBP16.17■□□□□ 0.18
LINC02554-201ENST00000426467 HRCP23327 699 aa16.12■□□□□ 0.17
LINC02554-201ENST00000426467 DCAF1Q9Y4B6 1507 aa16.1■□□□□ 0.17
LINC02554-201ENST00000426467 ATP1B4Q9UN42 357 aaPredicted RBP16.03■□□□□ 0.16
LINC02554-201ENST00000426467 NACADO15069 1562 aa15.97■□□□□ 0.15
LINC02554-201ENST00000426467 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
LINC02554-201ENST00000426467 RB1CC1Q8TDY2 1594 aa15.93■□□□□ 0.14
LINC02554-201ENST00000426467 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
LINC02554-201ENST00000426467 HNRNPUL2Q1KMD3 747 aaKnown RBP15.77■□□□□ 0.12
LINC02554-201ENST00000426467 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
LINC02554-201ENST00000426467 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
LINC02554-201ENST00000426467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
LINC02554-201ENST00000426467 ITGAEP38570 1179 aa15.7■□□□□ 0.1
LINC02554-201ENST00000426467 CECR2Q9BXF3 1484 aa15.69■□□□□ 0.1
LINC02554-201ENST00000426467 BAZ1AQ9NRL2 1556 aaPredicted RBP15.62■□□□□ 0.09
LINC02554-201ENST00000426467 PELP1Q8IZL8 1130 aaKnown RBP15.6■□□□□ 0.09
LINC02554-201ENST00000426467 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
LINC02554-201ENST00000426467 YTHDC1Q96MU7 727 aaKnown RBP15.48■□□□□ 0.07
LINC02554-201ENST00000426467 BAZ1BQ9UIG0 1483 aaKnown RBP15.46■□□□□ 0.06
LINC02554-201ENST00000426467 FAM50AQ14320 339 aaKnown RBP15.44■□□□□ 0.06
LINC02554-201ENST00000426467 EEA1Q15075 1411 aa15.43■□□□□ 0.06
LINC02554-201ENST00000426467 WRNQ14191 1432 aaPredicted RBP eCLIP15.42■□□□□ 0.06
LINC02554-201ENST00000426467 DIEXFQ68CQ4 756 aaKnown RBP15.4■□□□□ 0.06
LINC02554-201ENST00000426467 P3H3Q8IVL6 736 aa15.38■□□□□ 0.05
LINC02554-201ENST00000426467 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
LINC02554-201ENST00000426467 CEP162Q5TB80 1403 aa15.31■□□□□ 0.04
LINC02554-201ENST00000426467 WIZO95785 1651 aa15.31■□□□□ 0.04
LINC02554-201ENST00000426467 GOLGA3Q08378 1498 aa15.31■□□□□ 0.04
LINC02554-201ENST00000426467 CLIP1P30622 1438 aa15.31■□□□□ 0.04
LINC02554-201ENST00000426467 TNIKQ9UKE5 1360 aa15.28■□□□□ 0.04
LINC02554-201ENST00000426467 FBLN2P98095 1184 aa15.24■□□□□ 0.03
LINC02554-201ENST00000426467 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
LINC02554-201ENST00000426467 SOGA1O94964 1423 aa15.22■□□□□ 0.03
LINC02554-201ENST00000426467 CEP164Q9UPV0 1460 aa15.21■□□□□ 0.03
LINC02554-201ENST00000426467 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
LINC02554-201ENST00000426467 NEUROD1Q13562 356 aa15.21■□□□□ 0.03
LINC02554-201ENST00000426467 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
LINC02554-201ENST00000426467 NEFLP07196 543 aa15.19■□□□□ 0.02
LINC02554-201ENST00000426467 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
LINC02554-201ENST00000426467 TRIM52Q96A61 297 aa15.19■□□□□ 0.02
LINC02554-201ENST00000426467 KIF27Q86VH2 1401 aa15.18■□□□□ 0.02
LINC02554-201ENST00000426467 SMARCA4P51532 1647 aa15.16■□□□□ 0.02
LINC02554-201ENST00000426467 MYT1LQ9UL68 1186 aa15.14■□□□□ 0.01
LINC02554-201ENST00000426467 ARID3CA6NKF2 412 aa15.13■□□□□ 0.01
LINC02554-201ENST00000426467 POLR3GLQ9BT43 218 aa15.1■□□□□ 0.01
LINC02554-201ENST00000426467 ATAD2BQ9ULI0 1458 aa15.1■□□□□ 0.01
LINC02554-201ENST00000426467 CDK11AQ9UQ88 783 aaPredicted RBP15.06■□□□□ 0
LINC02554-201ENST00000426467 MYT1Q01538 1121 aa15.02□□□□□ -0.01
LINC02554-201ENST00000426467 MTUS2Q5JR59 1369 aa15□□□□□ -0.01
LINC02554-201ENST00000426467 CUX2O14529 1486 aa14.98□□□□□ -0.01
LINC02554-201ENST00000426467 CNGB1Q14028 1251 aaPredicted RBP14.97□□□□□ -0.01
LINC02554-201ENST00000426467 CARMIL1Q5VZK9 1371 aa14.96□□□□□ -0.01
LINC02554-201ENST00000426467 ZNF777Q9ULD5 760 aaPredicted RBP14.95□□□□□ -0.02
LINC02554-201ENST00000426467 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
LINC02554-201ENST00000426467 ANP32CO43423 234 aa14.92□□□□□ -0.02
LINC02554-201ENST00000426467 CHMP7Q8WUX9 453 aaPredicted RBP14.92□□□□□ -0.02
LINC02554-201ENST00000426467 GTF3C3Q9Y5Q9 886 aa14.91□□□□□ -0.02
LINC02554-201ENST00000426467 CADPSQ9ULU8 1353 aa14.91□□□□□ -0.02
LINC02554-201ENST00000426467 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
LINC02554-201ENST00000426467 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
LINC02554-201ENST00000426467 ACIN1Q9UKV3 1341 aaKnown RBP14.89□□□□□ -0.03
LINC02554-201ENST00000426467 TONSLQ96HA7 1378 aa14.89□□□□□ -0.03
LINC02554-201ENST00000426467 CHIC2Q9UKJ5 165 aa14.88□□□□□ -0.03
LINC02554-201ENST00000426467 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
LINC02554-201ENST00000426467 ERICH6Q7L0X2 663 aa14.83□□□□□ -0.04
LINC02554-201ENST00000426467 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
LINC02554-201ENST00000426467 CCNB3Q8WWL7 1395 aa14.8□□□□□ -0.04
LINC02554-201ENST00000426467 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
LINC02554-201ENST00000426467 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
LINC02554-201ENST00000426467 KANK4Q5T7N3 995 aaPredicted RBP14.79□□□□□ -0.04
LINC02554-201ENST00000426467 DDX10Q13206 875 aaKnown RBP14.77□□□□□ -0.04
LINC02554-201ENST00000426467 CLSPNQ9HAW4 1339 aa14.77□□□□□ -0.05
LINC02554-201ENST00000426467 RRP7BPQ9NSQ0 103 aa14.76□□□□□ -0.05
LINC02554-201ENST00000426467 TDRD9Q8NDG6 1382 aaKnown RBP14.76□□□□□ -0.05
LINC02554-201ENST00000426467 TSPY4P0CV99 314 aa14.74□□□□□ -0.05
LINC02554-201ENST00000426467 TSPY10P0CW01 314 aa14.74□□□□□ -0.05
LINC02554-201ENST00000426467 MIER1Q8N108 512 aa14.74□□□□□ -0.05
LINC02554-201ENST00000426467 EIF4G1Q04637 1599 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms