RNA–Protein interactions for RNA: ENST00000423966.5

AFF3-206, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-206ENST00000423966 ABCA5Q8WWZ7 1642 aa15.46■□□□□ 0.06
AFF3-206ENST00000423966 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
AFF3-206ENST00000423966 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
AFF3-206ENST00000423966 KIF21BO75037 1637 aa15.42■□□□□ 0.06
AFF3-206ENST00000423966 ERICH3Q5RHP9 1530 aa15.42■□□□□ 0.06
AFF3-206ENST00000423966 CUL7Q14999 1698 aa15.41■□□□□ 0.06
AFF3-206ENST00000423966 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
AFF3-206ENST00000423966 IGF1RP08069 1367 aa15.39■□□□□ 0.05
AFF3-206ENST00000423966 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
AFF3-206ENST00000423966 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
AFF3-206ENST00000423966 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
AFF3-206ENST00000423966 AQRO60306 1485 aaKnown RBP eCLIP15.37■□□□□ 0.05
AFF3-206ENST00000423966 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
AFF3-206ENST00000423966 PRXQ9BXM0 1461 aa15.35■□□□□ 0.05
AFF3-206ENST00000423966 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
AFF3-206ENST00000423966 LOC105371045A0A1W2PR82 267 aa15.34■□□□□ 0.05
AFF3-206ENST00000423966 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
AFF3-206ENST00000423966 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
AFF3-206ENST00000423966 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
AFF3-206ENST00000423966 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
AFF3-206ENST00000423966 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
AFF3-206ENST00000423966 ADAMTS12P58397 1594 aa15.28■□□□□ 0.04
AFF3-206ENST00000423966 TNIKQ9UKE5 1360 aa15.26■□□□□ 0.03
AFF3-206ENST00000423966 SNAPC4Q5SXM2 1469 aa15.26■□□□□ 0.03
AFF3-206ENST00000423966 SYNJ2O15056 1496 aa15.21■□□□□ 0.03
AFF3-206ENST00000423966 ABCB7O75027 752 aa15.2■□□□□ 0.02
AFF3-206ENST00000423966 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
AFF3-206ENST00000423966 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
AFF3-206ENST00000423966 GRIN2AQ12879 1464 aa15.16■□□□□ 0.02
AFF3-206ENST00000423966 TRHP20396 242 aaPredicted RBP15.16■□□□□ 0.02
AFF3-206ENST00000423966 FBLN2P98095 1184 aa15.15■□□□□ 0.02
AFF3-206ENST00000423966 CEP162Q5TB80 1403 aa15.14■□□□□ 0.01
AFF3-206ENST00000423966 CHD1O14646 1710 aa15.12■□□□□ 0.01
AFF3-206ENST00000423966 CLIP1P30622 1438 aa15.09■□□□□ 0.01
AFF3-206ENST00000423966 SLC4A2P04920 1241 aa15.08■□□□□ 0
AFF3-206ENST00000423966 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
AFF3-206ENST00000423966 IQGAP2Q13576 1575 aa15.07■□□□□ 0
AFF3-206ENST00000423966 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
AFF3-206ENST00000423966 NUP160Q12769 1436 aa15.06■□□□□ 0
AFF3-206ENST00000423966 RANGAP1P46060 587 aaPredicted RBP15.05■□□□□ -0
AFF3-206ENST00000423966 CEP170Q5SW79 1584 aa15.04■□□□□ -0
AFF3-206ENST00000423966 EFCAB5A4FU69 1503 aa15.04■□□□□ -0
AFF3-206ENST00000423966 UGGT2Q9NYU1 1516 aa14.99□□□□□ -0.01
AFF3-206ENST00000423966 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
AFF3-206ENST00000423966 APLP2Q06481 763 aa14.97□□□□□ -0.01
AFF3-206ENST00000423966 SAMD9Q5K651 1589 aa14.97□□□□□ -0.01
AFF3-206ENST00000423966 CARMIL2Q6F5E8 1435 aa14.94□□□□□ -0.02
AFF3-206ENST00000423966 JPH4Q96JJ6 628 aa14.94□□□□□ -0.02
AFF3-206ENST00000423966 VPS8Q8N3P4 1428 aa14.93□□□□□ -0.02
AFF3-206ENST00000423966 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
AFF3-206ENST00000423966 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
AFF3-206ENST00000423966 CLASP1Q7Z460 1538 aa14.92□□□□□ -0.02
AFF3-206ENST00000423966 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
AFF3-206ENST00000423966 FMN1Q68DA7 1419 aa14.91□□□□□ -0.02
AFF3-206ENST00000423966 P3H3Q8IVL6 736 aa14.9□□□□□ -0.02
AFF3-206ENST00000423966 KIAA0556O60303 1618 aa14.9□□□□□ -0.02
AFF3-206ENST00000423966 SHROOM2Q13796 1616 aa14.9□□□□□ -0.02
AFF3-206ENST00000423966 RBM42Q9BTD8 480 aaKnown RBP14.89□□□□□ -0.03
AFF3-206ENST00000423966 FHOD3Q2V2M9 1422 aa14.89□□□□□ -0.03
AFF3-206ENST00000423966 DISP1Q96F81 1524 aa14.87□□□□□ -0.03
AFF3-206ENST00000423966 PRG4Q92954 1404 aaPredicted RBP14.86□□□□□ -0.03
AFF3-206ENST00000423966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
AFF3-206ENST00000423966 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
AFF3-206ENST00000423966 FYCO1Q9BQS8 1478 aa14.82□□□□□ -0.04
AFF3-206ENST00000423966 CASKIN1Q8WXD9 1431 aa14.81□□□□□ -0.04
AFF3-206ENST00000423966 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
AFF3-206ENST00000423966 HECW1Q76N89 1606 aa14.77□□□□□ -0.04
AFF3-206ENST00000423966 PTPRGP23470 1445 aa14.77□□□□□ -0.04
AFF3-206ENST00000423966 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.05
AFF3-206ENST00000423966 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
AFF3-206ENST00000423966 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
AFF3-206ENST00000423966 RAPGEF6Q8TEU7 1601 aa14.75□□□□□ -0.05
AFF3-206ENST00000423966 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
AFF3-206ENST00000423966 SP7Q8TDD2 431 aaPredicted RBP14.74□□□□□ -0.05
AFF3-206ENST00000423966 CCDC18Q5T9S5 1454 aa14.74□□□□□ -0.05
AFF3-206ENST00000423966 CFAP43Q8NDM7 1665 aa14.72□□□□□ -0.05
AFF3-206ENST00000423966 TIAM1Q13009 1591 aa14.71□□□□□ -0.05
AFF3-206ENST00000423966 ERCC6L2Q5T890 1561 aa14.71□□□□□ -0.05
AFF3-206ENST00000423966 ABCA8O94911 1581 aa14.7□□□□□ -0.06
AFF3-206ENST00000423966 UACAQ9BZF9 1416 aa14.67□□□□□ -0.06
AFF3-206ENST00000423966 PLB1Q6P1J6 1458 aa14.67□□□□□ -0.06
AFF3-206ENST00000423966 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
AFF3-206ENST00000423966 KCNA4P22459 653 aa14.66□□□□□ -0.06
AFF3-206ENST00000423966 CDK11AQ9UQ88 783 aaPredicted RBP14.66□□□□□ -0.06
AFF3-206ENST00000423966 LRRIQ1Q96JM4 1722 aa14.66□□□□□ -0.06
AFF3-206ENST00000423966 NUP153P49790 1475 aaKnown RBP14.65□□□□□ -0.06
AFF3-206ENST00000423966 ABCC2Q92887 1545 aa14.64□□□□□ -0.07
AFF3-206ENST00000423966 UHRF1BP1LA0JNW5 1464 aa14.63□□□□□ -0.07
AFF3-206ENST00000423966 LRRC9Q6ZRR7 1453 aa14.63□□□□□ -0.07
AFF3-206ENST00000423966 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
AFF3-206ENST00000423966 PPARGC1BQ86YN6 1023 aaKnown RBP14.63□□□□□ -0.07
AFF3-206ENST00000423966 MTUS2Q5JR59 1369 aa14.62□□□□□ -0.07
AFF3-206ENST00000423966 CDK13Q14004 1512 aaKnown RBP14.61□□□□□ -0.07
AFF3-206ENST00000423966 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
AFF3-206ENST00000423966 POLA2Q14181 598 aa14.6□□□□□ -0.07
AFF3-206ENST00000423966 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
AFF3-206ENST00000423966 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
AFF3-206ENST00000423966 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
AFF3-206ENST00000423966 KANK4Q5T7N3 995 aaPredicted RBP14.58□□□□□ -0.08
AFF3-206ENST00000423966 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms