RNA–Protein interactions for RNA: ENST00000423479.7

CTCFL-205, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-205ENST00000423479 ARAP1Q96P48 1450 aa20.29■□□□□ 0.84
CTCFL-205ENST00000423479 KCNH8Q96L42 1107 aa20.29■□□□□ 0.84
CTCFL-205ENST00000423479 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
CTCFL-205ENST00000423479 BCANQ96GW7 911 aa20.27■□□□□ 0.84
CTCFL-205ENST00000423479 RAD54L2Q9Y4B4 1467 aa20.26■□□□□ 0.83
CTCFL-205ENST00000423479 FKBP8Q14318 412 aa20.25■□□□□ 0.83
CTCFL-205ENST00000423479 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
CTCFL-205ENST00000423479 PRXQ9BXM0 1461 aa20.23■□□□□ 0.83
CTCFL-205ENST00000423479 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
CTCFL-205ENST00000423479 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
CTCFL-205ENST00000423479 MRC2Q9UBG0 1479 aa20.22■□□□□ 0.83
CTCFL-205ENST00000423479 CCNB3Q8WWL7 1395 aa20.2■□□□□ 0.82
CTCFL-205ENST00000423479 NEFLP07196 543 aa20.15■□□□□ 0.82
CTCFL-205ENST00000423479 RBM19Q9Y4C8 960 aaKnown RBP20.15■□□□□ 0.82
CTCFL-205ENST00000423479 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
CTCFL-205ENST00000423479 IGF1RP08069 1367 aa20.13■□□□□ 0.81
CTCFL-205ENST00000423479 ITGAEP38570 1179 aa20.13■□□□□ 0.81
CTCFL-205ENST00000423479 DDX10Q13206 875 aaKnown RBP20.12■□□□□ 0.81
CTCFL-205ENST00000423479 WDR62O43379 1518 aa20.11■□□□□ 0.81
CTCFL-205ENST00000423479 RAB3GAP2Q9H2M9 1393 aa20.1■□□□□ 0.81
CTCFL-205ENST00000423479 TARBP1Q13395 1621 aaKnown RBP20.1■□□□□ 0.81
CTCFL-205ENST00000423479 ABCA5Q8WWZ7 1642 aa20.1■□□□□ 0.81
CTCFL-205ENST00000423479 MAPKBP1O60336 1514 aa20.1■□□□□ 0.81
CTCFL-205ENST00000423479 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
CTCFL-205ENST00000423479 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
CTCFL-205ENST00000423479 CUL7Q14999 1698 aa20.06■□□□□ 0.8
CTCFL-205ENST00000423479 TDRD9Q8NDG6 1382 aaKnown RBP20.03■□□□□ 0.8
CTCFL-205ENST00000423479 PPP1R15AO75807 674 aaPredicted RBP20.02■□□□□ 0.8
CTCFL-205ENST00000423479 GAPVD1Q14C86 1478 aa20.02■□□□□ 0.79
CTCFL-205ENST00000423479 CCER2I3L3R5 266 aa20.01■□□□□ 0.79
CTCFL-205ENST00000423479 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
CTCFL-205ENST00000423479 SETD5Q9C0A6 1442 aa19.99■□□□□ 0.79
CTCFL-205ENST00000423479 TRIM52Q96A61 297 aa19.99■□□□□ 0.79
CTCFL-205ENST00000423479 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
CTCFL-205ENST00000423479 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
CTCFL-205ENST00000423479 ANP32CO43423 234 aa19.96■□□□□ 0.79
CTCFL-205ENST00000423479 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
CTCFL-205ENST00000423479 TIMELESSQ9UNS1 1208 aa19.95■□□□□ 0.78
CTCFL-205ENST00000423479 MSH5O43196 834 aa19.9■□□□□ 0.78
CTCFL-205ENST00000423479 AQRO60306 1485 aaKnown RBP eCLIP19.9■□□□□ 0.783e-6■■■□□ 17.6
CTCFL-205ENST00000423479 CTTNBP2Q8WZ74 1663 aa19.89■□□□□ 0.78
CTCFL-205ENST00000423479 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
CTCFL-205ENST00000423479 MAP3K1Q13233 1512 aa19.88■□□□□ 0.77
CTCFL-205ENST00000423479 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
CTCFL-205ENST00000423479 TIAM1Q13009 1591 aa19.87■□□□□ 0.77
CTCFL-205ENST00000423479 EIF4G3O43432 1585 aaKnown RBP19.86■□□□□ 0.77
CTCFL-205ENST00000423479 FANCIQ9NVI1 1328 aa19.85■□□□□ 0.77
CTCFL-205ENST00000423479 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
CTCFL-205ENST00000423479 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
CTCFL-205ENST00000423479 FAM50AQ14320 339 aaKnown RBP19.83■□□□□ 0.76
CTCFL-205ENST00000423479 PHLDB1Q86UU1 1377 aa19.82■□□□□ 0.76
CTCFL-205ENST00000423479 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
CTCFL-205ENST00000423479 CDK11AQ9UQ88 783 aaPredicted RBP19.81■□□□□ 0.76
CTCFL-205ENST00000423479 ERICH6Q7L0X2 663 aa19.79■□□□□ 0.76
CTCFL-205ENST00000423479 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
CTCFL-205ENST00000423479 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
CTCFL-205ENST00000423479 EFCAB5A4FU69 1503 aa19.72■□□□□ 0.75
CTCFL-205ENST00000423479 HNRNPUQ00839 825 aaKnown RBP eCLIP19.72■□□□□ 0.75
CTCFL-205ENST00000423479 TONSLQ96HA7 1378 aa19.71■□□□□ 0.75
CTCFL-205ENST00000423479 IRX6P78412 446 aaPredicted RBP19.69■□□□□ 0.74
CTCFL-205ENST00000423479 ERICH6BQ5W0A0 696 aa19.67■□□□□ 0.74
CTCFL-205ENST00000423479 MYT1LQ9UL68 1186 aa19.67■□□□□ 0.74
CTCFL-205ENST00000423479 MAGI1Q96QZ7 1491 aaPredicted RBP19.66■□□□□ 0.74
CTCFL-205ENST00000423479 CFAP43Q8NDM7 1665 aa19.66■□□□□ 0.74
CTCFL-205ENST00000423479 PCF11O94913 1555 aaKnown RBP19.65■□□□□ 0.74
CTCFL-205ENST00000423479 FHOD3Q2V2M9 1422 aa19.64■□□□□ 0.74
CTCFL-205ENST00000423479 SAMD9Q5K651 1589 aa19.64■□□□□ 0.73
CTCFL-205ENST00000423479 IQGAP2Q13576 1575 aa19.63■□□□□ 0.73
CTCFL-205ENST00000423479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.63■□□□□ 0.73
CTCFL-205ENST00000423479 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
CTCFL-205ENST00000423479 GRIN2AQ12879 1464 aa19.62■□□□□ 0.73
CTCFL-205ENST00000423479 PPP4R2Q9NY27 417 aa19.61■□□□□ 0.73
CTCFL-205ENST00000423479 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
CTCFL-205ENST00000423479 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
CTCFL-205ENST00000423479 CCDC18Q5T9S5 1454 aa19.55■□□□□ 0.72
CTCFL-205ENST00000423479 UACAQ9BZF9 1416 aa19.54■□□□□ 0.72
CTCFL-205ENST00000423479 CHMP7Q8WUX9 453 aaPredicted RBP19.52■□□□□ 0.72
CTCFL-205ENST00000423479 FYCO1Q9BQS8 1478 aa19.52■□□□□ 0.72
CTCFL-205ENST00000423479 FMN1Q68DA7 1419 aa19.52■□□□□ 0.72
CTCFL-205ENST00000423479 CEP170Q5SW79 1584 aa19.52■□□□□ 0.71
CTCFL-205ENST00000423479 KIAA0586Q9BVV6 1533 aa19.52■□□□□ 0.71
CTCFL-205ENST00000423479 DEKP35659 375 aaKnown RBP19.51■□□□□ 0.71
CTCFL-205ENST00000423479 FBLN2P98095 1184 aa19.5■□□□□ 0.71
CTCFL-205ENST00000423479 UGGT2Q9NYU1 1516 aa19.5■□□□□ 0.71
CTCFL-205ENST00000423479 HFM1A2PYH4 1435 aa19.5■□□□□ 0.71
CTCFL-205ENST00000423479 FGD6Q6ZV73 1430 aa19.49■□□□□ 0.71
CTCFL-205ENST00000423479 WASHC2AQ641Q2 1341 aa19.49■□□□□ 0.71
CTCFL-205ENST00000423479 CASKIN1Q8WXD9 1431 aa19.49■□□□□ 0.71
CTCFL-205ENST00000423479 PTPRKQ15262 1439 aa19.47■□□□□ 0.71
CTCFL-205ENST00000423479 KDM5BQ9UGL1 1544 aa19.46■□□□□ 0.71
CTCFL-205ENST00000423479 B4GALNT3Q6L9W6 998 aa19.46■□□□□ 0.71
CTCFL-205ENST00000423479 HSPA5P11021 654 aaKnown RBP19.45■□□□□ 0.7
CTCFL-205ENST00000423479 KIAA0556O60303 1618 aa19.44■□□□□ 0.7
CTCFL-205ENST00000423479 NUP160Q12769 1436 aa19.44■□□□□ 0.7
CTCFL-205ENST00000423479 PTPN23Q9H3S7 1636 aa19.44■□□□□ 0.7
CTCFL-205ENST00000423479 CHD1O14646 1710 aa19.43■□□□□ 0.7
CTCFL-205ENST00000423479 NOP58Q9Y2X3 529 aaKnown RBP19.43■□□□□ 0.7
CTCFL-205ENST00000423479 CCDC184Q52MB2 194 aa19.42■□□□□ 0.7
CTCFL-205ENST00000423479 LRRIQ1Q96JM4 1722 aa19.41■□□□□ 0.7
CTCFL-205ENST00000423479 EIF4G2P78344 907 aaKnown RBP eCLIP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms