RNA–Protein interactions for RNA: ENST00000420081.1

LINC00240-201, long intergenic non-protein coding RNA 240, humanhuman

TSL 5

Gene LINC00240, Length 339 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-201ENST00000420081 PRKAR2AP13861 404 aaKnown RBP7.67□□□□□ -1.18
LINC00240-201ENST00000420081 LAMC3Q9Y6N6 1575 aa7.65□□□□□ -1.18
LINC00240-201ENST00000420081 EVX2Q03828 476 aa7.64□□□□□ -1.19
LINC00240-201ENST00000420081 PRR29P0C7W0 189 aa7.63□□□□□ -1.19
LINC00240-201ENST00000420081 ABCC8Q09428 1581 aa7.62□□□□□ -1.19
LINC00240-201ENST00000420081 KIF21AQ7Z4S6 1674 aa7.61□□□□□ -1.19
LINC00240-201ENST00000420081 EHMT2Q96KQ7 1210 aa7.61□□□□□ -1.19
LINC00240-201ENST00000420081 CFTRP13569 1480 aa7.6□□□□□ -1.19
LINC00240-201ENST00000420081 BIVM-ERCC5R4GMW8 1640 aa7.6□□□□□ -1.19
LINC00240-201ENST00000420081 SYNJ1O43426 1573 aa7.57□□□□□ -1.2
LINC00240-201ENST00000420081 CADPSQ9ULU8 1353 aa7.57□□□□□ -1.2
LINC00240-201ENST00000420081 TOP2BQ02880 1626 aa7.56□□□□□ -1.2
LINC00240-201ENST00000420081 CEP164Q9UPV0 1460 aa7.56□□□□□ -1.2
LINC00240-201ENST00000420081 LHX8Q68G74 356 aa7.56□□□□□ -1.2
LINC00240-201ENST00000420081 WRNQ14191 1432 aaPredicted RBP eCLIP7.55□□□□□ -1.2
LINC00240-201ENST00000420081 PLSCR2Q9NRY7 297 aa7.55□□□□□ -1.2
LINC00240-201ENST00000420081 NESP48681 1621 aa7.55□□□□□ -1.2
LINC00240-201ENST00000420081 FANCD2Q9BXW9 1451 aa7.55□□□□□ -1.2
LINC00240-201ENST00000420081 C19orf67A6NJJ6 358 aa7.54□□□□□ -1.2
LINC00240-201ENST00000420081 CHADLQ6NUI6 762 aa7.54□□□□□ -1.2
LINC00240-201ENST00000420081 DNMBPQ6XZF7 1577 aa7.54□□□□□ -1.2
LINC00240-201ENST00000420081 PDS5BQ9NTI5 1447 aa7.53□□□□□ -1.2
LINC00240-201ENST00000420081 TRIM41Q8WV44 630 aa7.52□□□□□ -1.21
LINC00240-201ENST00000420081 ERCC6Q03468 1493 aa7.51□□□□□ -1.21
LINC00240-201ENST00000420081 CUX1P39880 1505 aa7.5□□□□□ -1.21
LINC00240-201ENST00000420081 STAG3Q9UJ98 1225 aa7.48□□□□□ -1.21
LINC00240-201ENST00000420081 MRC2Q9UBG0 1479 aa7.48□□□□□ -1.21
LINC00240-201ENST00000420081 THOC2Q8NI27 1593 aaKnown RBP7.47□□□□□ -1.21
LINC00240-201ENST00000420081 WDR97A6NE52 1622 aa7.47□□□□□ -1.21
LINC00240-201ENST00000420081 TOPBP1Q92547 1522 aa7.47□□□□□ -1.21
LINC00240-201ENST00000420081 FARP1Q9Y4F1 1045 aaPredicted RBP7.46□□□□□ -1.22
LINC00240-201ENST00000420081 FGD5Q6ZNL6 1462 aa7.45□□□□□ -1.22
LINC00240-201ENST00000420081 SPDYE4A6NLX3 237 aa7.45□□□□□ -1.22
LINC00240-201ENST00000420081 GABBR2O75899 941 aa7.45□□□□□ -1.22
LINC00240-201ENST00000420081 EEA1Q15075 1411 aa7.44□□□□□ -1.22
LINC00240-201ENST00000420081 WDR62O43379 1518 aa7.44□□□□□ -1.22
LINC00240-201ENST00000420081 URB2Q14146 1524 aaKnown RBP7.44□□□□□ -1.22
LINC00240-201ENST00000420081 CD44P16070 742 aaKnown RBP7.43□□□□□ -1.22
LINC00240-201ENST00000420081 PBRM1Q86U86 1689 aa7.43□□□□□ -1.22
LINC00240-201ENST00000420081 POLA1P09884 1462 aaPredicted RBP7.41□□□□□ -1.22
LINC00240-201ENST00000420081 CUL7Q14999 1698 aa7.41□□□□□ -1.22
LINC00240-201ENST00000420081 CLCN6P51797 869 aa7.4□□□□□ -1.22
LINC00240-201ENST00000420081 KIF21BO75037 1637 aa7.4□□□□□ -1.22
LINC00240-201ENST00000420081 ABCA5Q8WWZ7 1642 aa7.39□□□□□ -1.23
LINC00240-201ENST00000420081 TARBP1Q13395 1621 aaKnown RBP7.38□□□□□ -1.23
LINC00240-201ENST00000420081 CUX2O14529 1486 aa7.38□□□□□ -1.23
LINC00240-201ENST00000420081 KIF27Q86VH2 1401 aa7.38□□□□□ -1.23
LINC00240-201ENST00000420081 ABCA10Q8WWZ4 1543 aa7.37□□□□□ -1.23
LINC00240-201ENST00000420081 FAM9AQ8IZU1 332 aaPredicted RBP7.37□□□□□ -1.23
LINC00240-201ENST00000420081 EIF4G3O43432 1585 aaKnown RBP7.37□□□□□ -1.23
LINC00240-201ENST00000420081 SOGA1O94964 1423 aa7.36□□□□□ -1.23
LINC00240-201ENST00000420081 CTTNBP2Q8WZ74 1663 aa7.36□□□□□ -1.23
LINC00240-201ENST00000420081 IFT140Q96RY7 1462 aa7.36□□□□□ -1.23
LINC00240-201ENST00000420081 CREBZFQ9NS37 354 aa7.35□□□□□ -1.23
LINC00240-201ENST00000420081 GOLGA3Q08378 1498 aa7.35□□□□□ -1.23
LINC00240-201ENST00000420081 ERICH3Q5RHP9 1530 aa7.34□□□□□ -1.23
LINC00240-201ENST00000420081 RAD54L2Q9Y4B4 1467 aa7.34□□□□□ -1.23
LINC00240-201ENST00000420081 ZRANB1Q9UGI0 708 aa7.33□□□□□ -1.24
LINC00240-201ENST00000420081 RUSC2Q8N2Y8 1516 aa7.32□□□□□ -1.24
LINC00240-201ENST00000420081 PAK3O75914 559 aaPredicted RBP7.32□□□□□ -1.24
LINC00240-201ENST00000420081 ADAMTS12P58397 1594 aa7.32□□□□□ -1.24
LINC00240-201ENST00000420081 NPM1P06748 294 aaKnown RBP eCLIP7.31□□□□□ -1.24
LINC00240-201ENST00000420081 DCBLD2Q96PD2 775 aa7.31□□□□□ -1.24
LINC00240-201ENST00000420081 GAPVD1Q14C86 1478 aa7.3□□□□□ -1.24
LINC00240-201ENST00000420081 ZNF579Q8NAF0 562 aaKnown RBP7.28□□□□□ -1.24
LINC00240-201ENST00000420081 GRIN2BQ13224 1484 aa7.28□□□□□ -1.24
LINC00240-201ENST00000420081 POTEIP0CG38 1075 aa7.27□□□□□ -1.25
LINC00240-201ENST00000420081 CHD1O14646 1710 aa7.27□□□□□ -1.25
LINC00240-201ENST00000420081 RAPGEF2Q9Y4G8 1499 aa7.26□□□□□ -1.25
LINC00240-201ENST00000420081 ZNF608Q9ULD9 1512 aaPredicted RBP7.26□□□□□ -1.25
LINC00240-201ENST00000420081 SNAPC4Q5SXM2 1469 aa7.25□□□□□ -1.25
LINC00240-201ENST00000420081 MAGI1Q96QZ7 1491 aaPredicted RBP7.25□□□□□ -1.25
LINC00240-201ENST00000420081 PRXQ9BXM0 1461 aa7.25□□□□□ -1.25
LINC00240-201ENST00000420081 TDRD9Q8NDG6 1382 aaKnown RBP7.25□□□□□ -1.25
LINC00240-201ENST00000420081 UBTFP17480 764 aaKnown RBP7.23□□□□□ -1.25
LINC00240-201ENST00000420081 CEP162Q5TB80 1403 aa7.23□□□□□ -1.25
LINC00240-201ENST00000420081 AQRO60306 1485 aaKnown RBP eCLIP7.23□□□□□ -1.25
LINC00240-201ENST00000420081 CARMIL1Q5VZK9 1371 aa7.22□□□□□ -1.25
LINC00240-201ENST00000420081 FHAD1B1AJZ9 1412 aa7.22□□□□□ -1.25
LINC00240-201ENST00000420081 TNIKQ9UKE5 1360 aa7.21□□□□□ -1.25
LINC00240-201ENST00000420081 IQGAP2Q13576 1575 aa7.21□□□□□ -1.25
LINC00240-201ENST00000420081 PLEKHG5O94827 1062 aa7.21□□□□□ -1.26
LINC00240-201ENST00000420081 EFCAB5A4FU69 1503 aa7.21□□□□□ -1.26
LINC00240-201ENST00000420081 SYNJ2O15056 1496 aa7.2□□□□□ -1.26
LINC00240-201ENST00000420081 LOC105371045A0A1W2PR82 267 aa7.2□□□□□ -1.26
LINC00240-201ENST00000420081 IGF1RP08069 1367 aa7.2□□□□□ -1.26
LINC00240-201ENST00000420081 CLIP1P30622 1438 aa7.19□□□□□ -1.26
LINC00240-201ENST00000420081 GRIN2AQ12879 1464 aa7.19□□□□□ -1.26
LINC00240-201ENST00000420081 GALR2O43603 387 aaPredicted RBP7.19□□□□□ -1.26
LINC00240-201ENST00000420081 MNX1P50219 401 aaPredicted RBP7.18□□□□□ -1.26
LINC00240-201ENST00000420081 PROM2Q8N271 834 aa7.18□□□□□ -1.26
LINC00240-201ENST00000420081 PHF12Q96QT6 1004 aa7.17□□□□□ -1.26
LINC00240-201ENST00000420081 SAMD9Q5K651 1589 aa7.16□□□□□ -1.26
LINC00240-201ENST00000420081 CEP170Q5SW79 1584 aa7.16□□□□□ -1.26
LINC00240-201ENST00000420081 POTEMA6NI47 508 aa7.15□□□□□ -1.26
LINC00240-201ENST00000420081 MIER1Q8N108 512 aa7.15□□□□□ -1.26
LINC00240-201ENST00000420081 CFAP43Q8NDM7 1665 aa7.14□□□□□ -1.27
LINC00240-201ENST00000420081 KIAA0556O60303 1618 aa7.13□□□□□ -1.27
LINC00240-201ENST00000420081 PCF11O94913 1555 aaKnown RBP7.13□□□□□ -1.27
LINC00240-201ENST00000420081 RANGAP1P46060 587 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms