RNA–Protein interactions for RNA: ENST00000420081.1

LINC00240-201, long intergenic non-protein coding RNA 240, humanhuman

TSL 5

Gene LINC00240, Length 339 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-201ENST00000420081 AEBP2Q6ZN18 517 aaPredicted RBP14.37□□□□□ -0.11
LINC00240-201ENST00000420081 CHIC1Q5VXU3 224 aa13.67□□□□□ -0.22
LINC00240-201ENST00000420081 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
LINC00240-201ENST00000420081 PHF23Q9BUL5 403 aaPredicted RBP12.18□□□□□ -0.46
LINC00240-201ENST00000420081 FOXD1Q16676 465 aa11.48□□□□□ -0.57
LINC00240-201ENST00000420081 POTEDQ86YR6 584 aa11.47□□□□□ -0.57
LINC00240-201ENST00000420081 PLPPR3Q6T4P5 718 aa10.95□□□□□ -0.66
LINC00240-201ENST00000420081 MSH5O43196 834 aa10.82□□□□□ -0.68
LINC00240-201ENST00000420081 PIAS4Q8N2W9 510 aaPredicted RBP10.76□□□□□ -0.69
LINC00240-201ENST00000420081 ADRA2BP18089 450 aa10.67□□□□□ -0.7
LINC00240-201ENST00000420081 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
LINC00240-201ENST00000420081 NISCHQ9Y2I1 1504 aa10.37□□□□□ -0.75
LINC00240-201ENST00000420081 SCAF1Q9H7N4 1312 aaKnown RBP9.87□□□□□ -0.83
LINC00240-201ENST00000420081 MAPK8IP2Q13387 824 aaPredicted RBP9.81□□□□□ -0.84
LINC00240-201ENST00000420081 DMRT2Q9Y5R5 561 aa9.77□□□□□ -0.85
LINC00240-201ENST00000420081 CACNB1Q02641 598 aaPredicted RBP9.6□□□□□ -0.87
LINC00240-201ENST00000420081 PPP4R3CPQ6ZMV5 832 aa9.57□□□□□ -0.88
LINC00240-201ENST00000420081 DCAF8L1A6NGE4 600 aa9.44□□□□□ -0.9
LINC00240-201ENST00000420081 CNKSR2Q8WXI2 1034 aa9.42□□□□□ -0.9
LINC00240-201ENST00000420081 HOXD11P31277 338 aaPredicted RBP9.39□□□□□ -0.91
LINC00240-201ENST00000420081 RNF216Q9NWF9 866 aaPredicted RBP9.34□□□□□ -0.91
LINC00240-201ENST00000420081 NCBP3Q53F19 620 aaKnown RBP9.26□□□□□ -0.93
LINC00240-201ENST00000420081 CCDC180Q9P1Z9 1646 aa9.26□□□□□ -0.93
LINC00240-201ENST00000420081 RNF39Q9H2S5 420 aa9.18□□□□□ -0.94
LINC00240-201ENST00000420081 C1QBPQ07021 282 aaKnown RBP9.1□□□□□ -0.95
LINC00240-201ENST00000420081 DNAJC5BQ9UF47 199 aa9.1□□□□□ -0.95
LINC00240-201ENST00000420081 NPM3O75607 178 aaKnown RBP9.03□□□□□ -0.96
LINC00240-201ENST00000420081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC00240-201ENST00000420081 POTEHQ6S545 545 aa8.88□□□□□ -0.99
LINC00240-201ENST00000420081 KCNA4P22459 653 aa8.82□□□□□ -1
LINC00240-201ENST00000420081 U3KPZ7 1027 aaPredicted RBP8.74□□□□□ -1.01
LINC00240-201ENST00000420081 ZCCHC6Q5VYS8 1495 aaKnown RBP8.72□□□□□ -1.01
LINC00240-201ENST00000420081 CAPN15O75808 1086 aa8.68□□□□□ -1.02
LINC00240-201ENST00000420081 ABCC9O60706 1549 aa8.66□□□□□ -1.02
LINC00240-201ENST00000420081 SPINK5Q9NQ38 1064 aaPredicted RBP8.63□□□□□ -1.03
LINC00240-201ENST00000420081 APLP2Q06481 763 aa8.62□□□□□ -1.03
LINC00240-201ENST00000420081 SLC4A2P04920 1241 aa8.61□□□□□ -1.03
LINC00240-201ENST00000420081 DCAF1Q9Y4B6 1507 aa8.6□□□□□ -1.03
LINC00240-201ENST00000420081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
LINC00240-201ENST00000420081 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
LINC00240-201ENST00000420081 DSG3P32926 999 aa8.59□□□□□ -1.03
LINC00240-201ENST00000420081 NACADO15069 1562 aa8.54□□□□□ -1.04
LINC00240-201ENST00000420081 TRHP20396 242 aaPredicted RBP8.53□□□□□ -1.04
LINC00240-201ENST00000420081 RB1CC1Q8TDY2 1594 aa8.52□□□□□ -1.04
LINC00240-201ENST00000420081 MYO15BQ96JP2 1530 aa8.52□□□□□ -1.05
LINC00240-201ENST00000420081 DCAF8L2P0C7V8 631 aa8.51□□□□□ -1.05
LINC00240-201ENST00000420081 SAMD1Q6SPF0 538 aaPredicted RBP8.51□□□□□ -1.05
LINC00240-201ENST00000420081 ZNF219Q9P2Y4 722 aaPredicted RBP8.51□□□□□ -1.05
LINC00240-201ENST00000420081 SCRIBQ14160 1630 aa8.44□□□□□ -1.06
LINC00240-201ENST00000420081 ABCB7O75027 752 aa8.43□□□□□ -1.06
LINC00240-201ENST00000420081 UNC13AQ9UPW8 1703 aa8.4□□□□□ -1.06
LINC00240-201ENST00000420081 MYCNP04198 464 aaPredicted RBP8.39□□□□□ -1.07
LINC00240-201ENST00000420081 SHROOM4Q9ULL8 1493 aa8.38□□□□□ -1.07
LINC00240-201ENST00000420081 SLC4A1APQ9BWU0 796 aaKnown RBP8.36□□□□□ -1.07
LINC00240-201ENST00000420081 POLA2Q14181 598 aa8.29□□□□□ -1.08
LINC00240-201ENST00000420081 FOXD4L1Q9NU39 408 aa8.28□□□□□ -1.08
LINC00240-201ENST00000420081 RBM42Q9BTD8 480 aaKnown RBP8.27□□□□□ -1.09
LINC00240-201ENST00000420081 BICRAQ9NZM4 1560 aa8.18□□□□□ -1.1
LINC00240-201ENST00000420081 ZBTB12Q9Y330 459 aaPredicted RBP8.15□□□□□ -1.1
LINC00240-201ENST00000420081 ATF5Q9Y2D1 282 aaPredicted RBP8.13□□□□□ -1.11
LINC00240-201ENST00000420081 CHRDL2Q6WN34 429 aa8.08□□□□□ -1.12
LINC00240-201ENST00000420081 BAZ1AQ9NRL2 1556 aaPredicted RBP8.08□□□□□ -1.12
LINC00240-201ENST00000420081 SP7Q8TDD2 431 aaPredicted RBP8.07□□□□□ -1.12
LINC00240-201ENST00000420081 SMARCA4P51532 1647 aa8.07□□□□□ -1.12
LINC00240-201ENST00000420081 ZBTB22O15209 634 aa8.05□□□□□ -1.12
LINC00240-201ENST00000420081 ATXN8OSP0DMR3 200 aa8.04□□□□□ -1.12
LINC00240-201ENST00000420081 PABPN1Q86U42 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00240-201ENST00000420081 AKT1S1Q96B36 256 aa8.04□□□□□ -1.12
LINC00240-201ENST00000420081 CECR2Q9BXF3 1484 aa8□□□□□ -1.13
LINC00240-201ENST00000420081 WIZO95785 1651 aa7.99□□□□□ -1.13
LINC00240-201ENST00000420081 MROH2BQ7Z745 1585 aa7.99□□□□□ -1.13
LINC00240-201ENST00000420081 OSCARQ8IYS5 282 aa7.98□□□□□ -1.13
LINC00240-201ENST00000420081 EIF4G1Q04637 1599 aaKnown RBP7.97□□□□□ -1.13
LINC00240-201ENST00000420081 SUPT5HO00267 1087 aaKnown RBP7.97□□□□□ -1.13
LINC00240-201ENST00000420081 REM2Q8IYK8 340 aaPredicted RBP7.95□□□□□ -1.14
LINC00240-201ENST00000420081 SMARCA2P51531 1590 aa7.95□□□□□ -1.14
LINC00240-201ENST00000420081 RSF1Q96T23 1441 aaPredicted RBP7.95□□□□□ -1.14
LINC00240-201ENST00000420081 FBLN2P98095 1184 aa7.94□□□□□ -1.14
LINC00240-201ENST00000420081 TOP2AP11388 1531 aaKnown RBP7.93□□□□□ -1.14
LINC00240-201ENST00000420081 PEG3Q9GZU2 1588 aa7.93□□□□□ -1.14
LINC00240-201ENST00000420081 CC2D2AQ9P2K1 1620 aa7.89□□□□□ -1.15
LINC00240-201ENST00000420081 HMGXB3Q12766 1538 aa7.88□□□□□ -1.15
LINC00240-201ENST00000420081 BAZ1BQ9UIG0 1483 aaKnown RBP7.88□□□□□ -1.15
LINC00240-201ENST00000420081 SPDYE2BA6NHP3 402 aa7.86□□□□□ -1.15
LINC00240-201ENST00000420081 SPDYE6P0CI01 402 aa7.86□□□□□ -1.15
LINC00240-201ENST00000420081 SPDYE2Q495Y8 402 aa7.86□□□□□ -1.15
LINC00240-201ENST00000420081 ATAD2BQ9ULI0 1458 aa7.85□□□□□ -1.15
LINC00240-201ENST00000420081 PIP4P2Q8N4L2 257 aa7.84□□□□□ -1.15
LINC00240-201ENST00000420081 PITPNM1O00562 1244 aa7.83□□□□□ -1.16
LINC00240-201ENST00000420081 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
LINC00240-201ENST00000420081 FXR2P51116 673 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC00240-201ENST00000420081 ZNF692Q9BU19 519 aaPredicted RBP7.79□□□□□ -1.16
LINC00240-201ENST00000420081 NCAPD3P42695 1498 aa7.77□□□□□ -1.17
LINC00240-201ENST00000420081 HAX1O00165 279 aa7.77□□□□□ -1.17
LINC00240-201ENST00000420081 MKRN4PQ13434 485 aaPredicted RBP7.75□□□□□ -1.17
LINC00240-201ENST00000420081 SPDYE1Q8NFV5 336 aaPredicted RBP7.75□□□□□ -1.17
LINC00240-201ENST00000420081 CLEC11AQ9Y240 323 aa7.75□□□□□ -1.17
LINC00240-201ENST00000420081 CCDC88BA6NC98 1476 aa7.74□□□□□ -1.17
LINC00240-201ENST00000420081 CSRNP3Q8WYN3 585 aa7.7□□□□□ -1.18
LINC00240-201ENST00000420081 SSUH2Q9Y2M2 353 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms