RNA–Protein interactions for RNA: ENST00000416982.1

LINC01287-201, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 2 BASIC

Gene LINC01287, Length 2,624 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-201ENST00000416982 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
LINC01287-201ENST00000416982 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
LINC01287-201ENST00000416982 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
LINC01287-201ENST00000416982 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
LINC01287-201ENST00000416982 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
LINC01287-201ENST00000416982 LAMC3Q9Y6N6 1575 aa14.82□□□□□ -0.04
LINC01287-201ENST00000416982 ERICH6Q7L0X2 663 aa14.81□□□□□ -0.04
LINC01287-201ENST00000416982 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
LINC01287-201ENST00000416982 VPS8Q8N3P4 1428 aa14.79□□□□□ -0.04
LINC01287-201ENST00000416982 ERICH3Q5RHP9 1530 aa14.78□□□□□ -0.04
LINC01287-201ENST00000416982 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
LINC01287-201ENST00000416982 HNRNPUL2Q1KMD3 747 aaKnown RBP14.78□□□□□ -0.04
LINC01287-201ENST00000416982 ARAP1Q96P48 1450 aa14.77□□□□□ -0.04
LINC01287-201ENST00000416982 ATP1B4Q9UN42 357 aaPredicted RBP14.77□□□□□ -0.05
LINC01287-201ENST00000416982 ABCA10Q8WWZ4 1543 aa14.74□□□□□ -0.05
LINC01287-201ENST00000416982 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
LINC01287-201ENST00000416982 ARHGAP35Q9NRY4 1499 aa14.71□□□□□ -0.05
LINC01287-201ENST00000416982 AQRO60306 1485 aaKnown RBP eCLIP14.69□□□□□ -0.06
LINC01287-201ENST00000416982 GAPVD1Q14C86 1478 aa14.67□□□□□ -0.06
LINC01287-201ENST00000416982 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
LINC01287-201ENST00000416982 ITGAEP38570 1179 aa14.62□□□□□ -0.07
LINC01287-201ENST00000416982 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
LINC01287-201ENST00000416982 FHOD3Q2V2M9 1422 aa14.61□□□□□ -0.07
LINC01287-201ENST00000416982 ZNF608Q9ULD9 1512 aaPredicted RBP14.6□□□□□ -0.07
LINC01287-201ENST00000416982 DHX57Q6P158 1386 aaKnown RBP14.6□□□□□ -0.07
LINC01287-201ENST00000416982 RBM19Q9Y4C8 960 aaKnown RBP14.59□□□□□ -0.07
LINC01287-201ENST00000416982 FBLN2P98095 1184 aa14.57□□□□□ -0.08
LINC01287-201ENST00000416982 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
LINC01287-201ENST00000416982 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
LINC01287-201ENST00000416982 AMER1Q5JTC6 1135 aaPredicted RBP14.55□□□□□ -0.08
LINC01287-201ENST00000416982 BCANQ96GW7 911 aa14.54□□□□□ -0.08
LINC01287-201ENST00000416982 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
LINC01287-201ENST00000416982 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
LINC01287-201ENST00000416982 FKBP8Q14318 412 aa14.52□□□□□ -0.09
LINC01287-201ENST00000416982 KCNH8Q96L42 1107 aa14.5□□□□□ -0.09
LINC01287-201ENST00000416982 MSH5O43196 834 aa14.5□□□□□ -0.09
LINC01287-201ENST00000416982 CUL7Q14999 1698 aa14.48□□□□□ -0.09
LINC01287-201ENST00000416982 ARXQ96QS3 562 aa14.47□□□□□ -0.09
LINC01287-201ENST00000416982 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
LINC01287-201ENST00000416982 CHMP7Q8WUX9 453 aaPredicted RBP14.45□□□□□ -0.1
LINC01287-201ENST00000416982 WDR62O43379 1518 aa14.45□□□□□ -0.1
LINC01287-201ENST00000416982 GRIN2BQ13224 1484 aa14.45□□□□□ -0.1
LINC01287-201ENST00000416982 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
LINC01287-201ENST00000416982 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
LINC01287-201ENST00000416982 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
LINC01287-201ENST00000416982 FANCIQ9NVI1 1328 aa14.41□□□□□ -0.1
LINC01287-201ENST00000416982 SNAPC4Q5SXM2 1469 aa14.41□□□□□ -0.1
LINC01287-201ENST00000416982 CCNB3Q8WWL7 1395 aa14.41□□□□□ -0.1
LINC01287-201ENST00000416982 PCF11O94913 1555 aaKnown RBP14.41□□□□□ -0.1
LINC01287-201ENST00000416982 LRRC9Q6ZRR7 1453 aa14.4□□□□□ -0.1
LINC01287-201ENST00000416982 TIAM1Q13009 1591 aa14.39□□□□□ -0.11
LINC01287-201ENST00000416982 NEFLP07196 543 aa14.39□□□□□ -0.11
LINC01287-201ENST00000416982 PBRM1Q86U86 1689 aa14.37□□□□□ -0.11
LINC01287-201ENST00000416982 CASKIN1Q8WXD9 1431 aa14.37□□□□□ -0.11
LINC01287-201ENST00000416982 CTTNBP2Q8WZ74 1663 aa14.37□□□□□ -0.11
LINC01287-201ENST00000416982 FMN1Q68DA7 1419 aa14.36□□□□□ -0.11
LINC01287-201ENST00000416982 THOC2Q8NI27 1593 aaKnown RBP14.36□□□□□ -0.11
LINC01287-201ENST00000416982 RRBP1Q9P2E9 1410 aaKnown RBP14.35□□□□□ -0.11
LINC01287-201ENST00000416982 ADAMTS12P58397 1594 aa14.35□□□□□ -0.11
LINC01287-201ENST00000416982 EFCAB5A4FU69 1503 aa14.34□□□□□ -0.11
LINC01287-201ENST00000416982 MTUS2Q5JR59 1369 aa14.34□□□□□ -0.11
LINC01287-201ENST00000416982 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
LINC01287-201ENST00000416982 MYT1LQ9UL68 1186 aa14.33□□□□□ -0.12
LINC01287-201ENST00000416982 FYCO1Q9BQS8 1478 aa14.32□□□□□ -0.12
LINC01287-201ENST00000416982 MAPKBP1O60336 1514 aa14.31□□□□□ -0.12
LINC01287-201ENST00000416982 GRIN2AQ12879 1464 aa14.3□□□□□ -0.12
LINC01287-201ENST00000416982 IQGAP2Q13576 1575 aa14.3□□□□□ -0.12
LINC01287-201ENST00000416982 JPH4Q96JJ6 628 aa14.29□□□□□ -0.12
LINC01287-201ENST00000416982 SAMD9Q5K651 1589 aa14.28□□□□□ -0.12
LINC01287-201ENST00000416982 CCER2I3L3R5 266 aa14.28□□□□□ -0.12
LINC01287-201ENST00000416982 MAP3K1Q13233 1512 aa14.27□□□□□ -0.12
LINC01287-201ENST00000416982 PPP1R15AO75807 674 aaPredicted RBP14.27□□□□□ -0.13
LINC01287-201ENST00000416982 KIAA0586Q9BVV6 1533 aa14.26□□□□□ -0.13
LINC01287-201ENST00000416982 DDX10Q13206 875 aaKnown RBP14.25□□□□□ -0.13
LINC01287-201ENST00000416982 RAB3GAP2Q9H2M9 1393 aa14.24□□□□□ -0.13
LINC01287-201ENST00000416982 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
LINC01287-201ENST00000416982 DEKP35659 375 aaKnown RBP14.24□□□□□ -0.13
LINC01287-201ENST00000416982 CDK13Q14004 1512 aaKnown RBP14.23□□□□□ -0.13
LINC01287-201ENST00000416982 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
LINC01287-201ENST00000416982 DISP1Q96F81 1524 aa14.23□□□□□ -0.13
LINC01287-201ENST00000416982 TRIM52Q96A61 297 aa14.22□□□□□ -0.13
LINC01287-201ENST00000416982 MAGI1Q96QZ7 1491 aaPredicted RBP14.22□□□□□ -0.13
LINC01287-201ENST00000416982 KCNA4P22459 653 aa14.22□□□□□ -0.13
LINC01287-201ENST00000416982 TIMELESSQ9UNS1 1208 aa14.21□□□□□ -0.13
LINC01287-201ENST00000416982 MAGI3Q5TCQ9 1506 aa14.21□□□□□ -0.14
LINC01287-201ENST00000416982 CEP170Q5SW79 1584 aa14.2□□□□□ -0.14
LINC01287-201ENST00000416982 LRRIQ1Q96JM4 1722 aa14.2□□□□□ -0.14
LINC01287-201ENST00000416982 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
LINC01287-201ENST00000416982 CFAP43Q8NDM7 1665 aa14.2□□□□□ -0.14
LINC01287-201ENST00000416982 NCOA2Q15596 1464 aa14.2□□□□□ -0.14
LINC01287-201ENST00000416982 FGD6Q6ZV73 1430 aa14.18□□□□□ -0.14
LINC01287-201ENST00000416982 UGGT2Q9NYU1 1516 aa14.18□□□□□ -0.14
LINC01287-201ENST00000416982 EPRSP07814 1512 aaKnown RBP14.18□□□□□ -0.14
LINC01287-201ENST00000416982 PLB1Q6P1J6 1458 aa14.17□□□□□ -0.14
LINC01287-201ENST00000416982 RRP7BPQ9NSQ0 103 aa14.17□□□□□ -0.14
LINC01287-201ENST00000416982 PTPRKQ15262 1439 aa14.17□□□□□ -0.14
LINC01287-201ENST00000416982 ZNF644Q9H582 1327 aaPredicted RBP14.17□□□□□ -0.14
LINC01287-201ENST00000416982 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
LINC01287-201ENST00000416982 SETD5Q9C0A6 1442 aa14.16□□□□□ -0.14
LINC01287-201ENST00000416982 ANP32CO43423 234 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms